RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 ZC3HC1Q86WB0 502 aaKnown RBP22.79■■□□□ 1.24
HOMER3-205ENST00000542541 HID1Q8IV36 788 aa22.79■■□□□ 1.24
HOMER3-205ENST00000542541 OR1E3Q8WZA6 343 aa22.79■■□□□ 1.24
HOMER3-205ENST00000542541 TSACCQ96A04 125 aaPredicted RBP22.79■■□□□ 1.24
HOMER3-205ENST00000542541 BIRC8Q96P09 236 aa22.79■■□□□ 1.24
HOMER3-205ENST00000542541 RBBP8Q99708 897 aa22.79■■□□□ 1.24
HOMER3-205ENST00000542541 CARS2Q9HA77 564 aaKnown RBP22.79■■□□□ 1.24
HOMER3-205ENST00000542541 SLC24A2Q9UI40 661 aa22.79■■□□□ 1.24
HOMER3-205ENST00000542541 KLHL33A6NCF5 533 aa22.78■■□□□ 1.24
HOMER3-205ENST00000542541 KMOO15229 486 aa22.78■■□□□ 1.24
HOMER3-205ENST00000542541 FTH1P02794 183 aa22.78■■□□□ 1.24
HOMER3-205ENST00000542541 GSTM1P09488 218 aa22.78■■□□□ 1.24
HOMER3-205ENST00000542541 CTSKP43235 329 aa22.78■■□□□ 1.24
HOMER3-205ENST00000542541 PRLHRP49683 370 aa22.78■■□□□ 1.24
HOMER3-205ENST00000542541 SERPINB9P50453 376 aa22.78■■□□□ 1.24
HOMER3-205ENST00000542541 HK3P52790 923 aa22.78■■□□□ 1.24
HOMER3-205ENST00000542541 CTSCP53634 463 aa22.78■■□□□ 1.24
HOMER3-205ENST00000542541 GSTM4Q03013 218 aa22.78■■□□□ 1.24
HOMER3-205ENST00000542541 EIF2B5Q13144 721 aaKnown RBP22.78■■□□□ 1.24
HOMER3-205ENST00000542541 KIF19Q2TAC6 998 aa22.78■■□□□ 1.24
HOMER3-205ENST00000542541 PYCR3Q53H96 274 aa22.78■■□□□ 1.24
HOMER3-205ENST00000542541 TRIM61Q5EBN2 209 aa22.78■■□□□ 1.24
HOMER3-205ENST00000542541 LGSNQ5TDP6 509 aa22.78■■□□□ 1.24
HOMER3-205ENST00000542541 IL27RAQ6UWB1 636 aa22.78■■□□□ 1.24
HOMER3-205ENST00000542541 TAOK1Q7L7X3 1001 aa22.78■■□□□ 1.24
HOMER3-205ENST00000542541 OXR1Q8N573 874 aa22.78■■□□□ 1.24
HOMER3-205ENST00000542541 CCDC97Q96F63 343 aaPredicted RBP22.78■■□□□ 1.24
HOMER3-205ENST00000542541 PANX3Q96QZ0 392 aa22.78■■□□□ 1.24
HOMER3-205ENST00000542541 ZDHHC5Q9C0B5 715 aa22.78■■□□□ 1.24
HOMER3-205ENST00000542541 MRPL40Q9NQ50 206 aaKnown RBP22.78■■□□□ 1.24
HOMER3-205ENST00000542541 ZNF180Q9UJW8 692 aa22.78■■□□□ 1.24
HOMER3-205ENST00000542541 PRSS21Q9Y6M0 314 aa22.78■■□□□ 1.24
HOMER3-205ENST00000542541 FUCA1P04066 466 aa22.77■■□□□ 1.24
HOMER3-205ENST00000542541 SYPP08247 313 aa22.77■■□□□ 1.24
HOMER3-205ENST00000542541 F7P08709 466 aaPredicted RBP22.77■■□□□ 1.24
HOMER3-205ENST00000542541 GNPDA1P46926 289 aa22.77■■□□□ 1.24
HOMER3-205ENST00000542541 FBXO38Q6PIJ6 1188 aa22.77■■□□□ 1.24
HOMER3-205ENST00000542541 PDXPQ96GD0 296 aa22.77■■□□□ 1.24
HOMER3-205ENST00000542541 VPS39Q96JC1 886 aa22.77■■□□□ 1.24
HOMER3-205ENST00000542541 MCMBPQ9BTE3 642 aa22.77■■□□□ 1.24
HOMER3-205ENST00000542541 NUSAP1Q9BXS6 441 aaKnown RBP22.77■■□□□ 1.24
HOMER3-205ENST00000542541 SLC13A1Q9BZW2 595 aa22.77■■□□□ 1.24
HOMER3-205ENST00000542541 CAPN10Q9HC96 672 aa22.77■■□□□ 1.24
HOMER3-205ENST00000542541 DNAJC28Q9NX36 388 aa22.77■■□□□ 1.24
HOMER3-205ENST00000542541 TNRC6BQ9UPQ9 1833 aaKnown RBP22.76■■□□□ 1.23
HOMER3-205ENST00000542541 H3BM21 787 aa22.76■■□□□ 1.23
HOMER3-205ENST00000542541 KHNYNO15037 678 aaKnown RBP22.76■■□□□ 1.23
HOMER3-205ENST00000542541 KCNJ13O60928 360 aa22.76■■□□□ 1.23
HOMER3-205ENST00000542541 TCEA3O75764 348 aa22.76■■□□□ 1.23
HOMER3-205ENST00000542541 LMNAP02545 664 aaKnown RBP22.76■■□□□ 1.23
HOMER3-205ENST00000542541 CSF2P04141 144 aa22.76■■□□□ 1.23
HOMER3-205ENST00000542541 SHBGP04278 402 aa22.76■■□□□ 1.23
HOMER3-205ENST00000542541 CRTC3Q6UUV7 619 aa22.76■■□□□ 1.23
HOMER3-205ENST00000542541 PHACTR4Q8IZ21 702 aa22.76■■□□□ 1.23
HOMER3-205ENST00000542541 GPATCH11Q8N954 259 aa22.76■■□□□ 1.23
HOMER3-205ENST00000542541 LINC00615Q96LM1 132 aaPredicted RBP22.76■■□□□ 1.23
HOMER3-205ENST00000542541 OR2M4Q96R27 311 aa22.76■■□□□ 1.23
HOMER3-205ENST00000542541 CCM2Q9BSQ5 444 aa22.76■■□□□ 1.23
HOMER3-205ENST00000542541 FAM86C1Q9NVL1 165 aa22.76■■□□□ 1.23
HOMER3-205ENST00000542541 TRNAU1APQ9NX07 287 aaKnown RBP22.76■■□□□ 1.23
HOMER3-205ENST00000542541 PLAAQ9Y263 795 aa22.76■■□□□ 1.23
HOMER3-205ENST00000542541 GPSM3Q9Y4H4 160 aa22.76■■□□□ 1.23
HOMER3-205ENST00000542541 SNX11Q9Y5W9 270 aa22.76■■□□□ 1.23
HOMER3-205ENST00000542541 PLXNB3Q9ULL4 1909 aa22.76■■□□□ 1.23
HOMER3-205ENST00000542541 E5RI56 91 aa22.75■■□□□ 1.23
HOMER3-205ENST00000542541 SGTAO43765 313 aa22.75■■□□□ 1.23
HOMER3-205ENST00000542541 DFNA5O60443 496 aa22.75■■□□□ 1.23
HOMER3-205ENST00000542541 KRT38O76015 456 aa22.75■■□□□ 1.23
HOMER3-205ENST00000542541 NME1P15531 152 aaKnown RBP22.75■■□□□ 1.23
HOMER3-205ENST00000542541 JUNDP17535 347 aa22.75■■□□□ 1.23
HOMER3-205ENST00000542541 VCLP18206 1134 aa22.75■■□□□ 1.23
HOMER3-205ENST00000542541 CHRM3P20309 590 aa22.75■■□□□ 1.23
HOMER3-205ENST00000542541 CNTFP26441 200 aa22.75■■□□□ 1.23
HOMER3-205ENST00000542541 ARRB1P49407 418 aaPredicted RBP22.75■■□□□ 1.23
HOMER3-205ENST00000542541 LIMK2P53671 638 aa22.75■■□□□ 1.23
HOMER3-205ENST00000542541 LRP8Q14114 963 aa22.75■■□□□ 1.23
HOMER3-205ENST00000542541 CTSL3PQ5NE16 218 aa22.75■■□□□ 1.23
HOMER3-205ENST00000542541 FAM45BPQ6NSW5 357 aa22.75■■□□□ 1.23
HOMER3-205ENST00000542541 ZNF547Q8IVP9 402 aa22.75■■□□□ 1.23
HOMER3-205ENST00000542541 FAM45AQ8TCE6 357 aa22.75■■□□□ 1.23
HOMER3-205ENST00000542541 KCNJ9Q92806 393 aa22.75■■□□□ 1.23
HOMER3-205ENST00000542541 ATXN7L3BQ96GX2 97 aa22.75■■□□□ 1.23
HOMER3-205ENST00000542541 AARSD1Q9BTE6 412 aaKnown RBP22.75■■□□□ 1.23
HOMER3-205ENST00000542541 DHRS4Q9BTZ2 278 aa22.75■■□□□ 1.23
HOMER3-205ENST00000542541 ROPN1BQ9BZX4 212 aaPredicted RBP22.75■■□□□ 1.23
HOMER3-205ENST00000542541 ROPN1Q9HAT0 212 aaPredicted RBP22.75■■□□□ 1.23
HOMER3-205ENST00000542541 VWA7Q9Y334 891 aa22.75■■□□□ 1.23
HOMER3-205ENST00000542541 C17orf113A0A1B0GUU1 675 aa22.75■■□□□ 1.23
HOMER3-205ENST00000542541 KPNA5O15131 536 aa22.75■■□□□ 1.23
HOMER3-205ENST00000542541 POP7O75817 140 aaKnown RBP22.75■■□□□ 1.23
HOMER3-205ENST00000542541 FAM155BO75949 473 aa22.75■■□□□ 1.23
HOMER3-205ENST00000542541 TRIM16O95361 564 aa22.75■■□□□ 1.23
HOMER3-205ENST00000542541 CTSEP14091 401 aa22.75■■□□□ 1.23
HOMER3-205ENST00000542541 ABCG1P45844 678 aa22.75■■□□□ 1.23
HOMER3-205ENST00000542541 HNRNPKP61978 463 aaKnown RBP eCLIP22.75■■□□□ 1.237e-10■■■□□ 18.2
HOMER3-205ENST00000542541 PLA2G2CQ5R387 149 aa22.75■■□□□ 1.23
HOMER3-205ENST00000542541 ZNF549Q6P9A3 640 aa22.75■■□□□ 1.23
HOMER3-205ENST00000542541 ADGRD1Q6QNK2 874 aa22.75■■□□□ 1.23
HOMER3-205ENST00000542541 CHST15Q7LFX5 561 aaPredicted RBP22.75■■□□□ 1.23
HOMER3-205ENST00000542541 AMZ2Q86W34 360 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms