RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 AGBL4Q5VU57 503 aa24.22■■□□□ 1.47
TTC3-225ENST00000540756 MTDHQ86UE4 582 aaKnown RBP24.22■■□□□ 1.47
TTC3-225ENST00000540756 SUGP1Q8IWZ8 645 aaKnown RBP24.22■■□□□ 1.47
TTC3-225ENST00000540756 PTGR2Q8N8N7 351 aaPredicted RBP24.22■■□□□ 1.47
TTC3-225ENST00000540756 PRR11Q96HE9 360 aaPredicted RBP24.22■■□□□ 1.47
TTC3-225ENST00000540756 HEY2Q9UBP5 337 aa24.22■■□□□ 1.47
TTC3-225ENST00000540756 ZDHHC2Q9UIJ5 367 aa24.22■■□□□ 1.47
TTC3-225ENST00000540756 A0A1W2PP55 124 aa24.21■■□□□ 1.47
TTC3-225ENST00000540756 RGSL1A5PLK6 1076 aa24.21■■□□□ 1.47
TTC3-225ENST00000540756 SHISA7A6NL88 538 aa24.21■■□□□ 1.47
TTC3-225ENST00000540756 UBOX5O94941 541 aa24.21■■□□□ 1.47
TTC3-225ENST00000540756 CD72P21854 359 aa24.21■■□□□ 1.47
TTC3-225ENST00000540756 NTSR1P30989 418 aa24.21■■□□□ 1.47
TTC3-225ENST00000540756 TMEM52BQ4KMG9 183 aa24.21■■□□□ 1.47
TTC3-225ENST00000540756 FAM46CQ5VWP2 391 aa24.21■■□□□ 1.47
TTC3-225ENST00000540756 CCDC121Q6ZUS5 278 aa24.21■■□□□ 1.47
TTC3-225ENST00000540756 ALYREFQ86V81 257 aaKnown RBP24.21■■□□□ 1.47
TTC3-225ENST00000540756 RALGPS2Q86X27 583 aaPredicted RBP24.21■■□□□ 1.47
TTC3-225ENST00000540756 ZBTB2Q8N680 514 aa24.21■■□□□ 1.47
TTC3-225ENST00000540756 BTN2A2Q8WVV5 523 aa24.21■■□□□ 1.47
TTC3-225ENST00000540756 MYLK2Q9H1R3 596 aa24.21■■□□□ 1.47
TTC3-225ENST00000540756 TNFRSF12AQ9NP84 129 aa24.21■■□□□ 1.47
TTC3-225ENST00000540756 SPATS2LQ9NUQ6 558 aaKnown RBP24.21■■□□□ 1.47
TTC3-225ENST00000540756 SUPT3HB4E1H0 165 aa24.2■■□□□ 1.47
TTC3-225ENST00000540756 F8W8V4 182 aa24.2■■□□□ 1.47
TTC3-225ENST00000540756 LZTS3O60299 673 aaPredicted RBP24.2■■□□□ 1.47
TTC3-225ENST00000540756 SUPT3HO75486 399 aa24.2■■□□□ 1.47
TTC3-225ENST00000540756 KLF8O95600 359 aaPredicted RBP24.2■■□□□ 1.47
TTC3-225ENST00000540756 CFAP157Q5JU67 520 aa24.2■■□□□ 1.47
TTC3-225ENST00000540756 TRIM74Q86UV6 250 aa24.2■■□□□ 1.47
TTC3-225ENST00000540756 NRSN1Q8IZ57 195 aa24.2■■□□□ 1.47
TTC3-225ENST00000540756 CDX2Q99626 313 aaPredicted RBP24.2■■□□□ 1.47
TTC3-225ENST00000540756 PHF7Q9BWX1 381 aaPredicted RBP24.2■■□□□ 1.47
TTC3-225ENST00000540756 TRPV5Q9NQA5 729 aa24.2■■□□□ 1.47
TTC3-225ENST00000540756 KCNK4Q9NYG8 393 aa24.2■■□□□ 1.47
TTC3-225ENST00000540756 UTP6Q9NYH9 597 aaKnown RBP24.2■■□□□ 1.47
TTC3-225ENST00000540756 CNOT6Q9ULM6 557 aaKnown RBP24.2■■□□□ 1.47
TTC3-225ENST00000540756 A0A1W2PQF6 199 aa24.2■■□□□ 1.46
TTC3-225ENST00000540756 OR2AG2A6NM03 316 aa24.2■■□□□ 1.46
TTC3-225ENST00000540756 SMIM24O75264 130 aa24.2■■□□□ 1.46
TTC3-225ENST00000540756 TPBGLP0DKB5 382 aa24.2■■□□□ 1.46
TTC3-225ENST00000540756 SERPINB3P29508 390 aa24.2■■□□□ 1.46
TTC3-225ENST00000540756 RPS14P62263 151 aaKnown RBP24.2■■□□□ 1.46
TTC3-225ENST00000540756 ZNF678Q5SXM1 525 aa24.2■■□□□ 1.46
TTC3-225ENST00000540756 HDDC3Q8N4P3 179 aa24.2■■□□□ 1.46
TTC3-225ENST00000540756 DDHD1Q8NEL9 900 aa24.2■■□□□ 1.46
TTC3-225ENST00000540756 DTX3LQ8TDB6 740 aa24.2■■□□□ 1.46
TTC3-225ENST00000540756 GLYATL1Q969I3 302 aa24.2■■□□□ 1.46
TTC3-225ENST00000540756 ERP27Q96DN0 273 aa24.2■■□□□ 1.46
TTC3-225ENST00000540756 NUS1Q96E22 293 aa24.2■■□□□ 1.46
TTC3-225ENST00000540756 CCDC126Q96EE4 140 aa24.2■■□□□ 1.46
TTC3-225ENST00000540756 RAD18Q9NS91 495 aa24.2■■□□□ 1.46
TTC3-225ENST00000540756 TMEM233B4DJY2 109 aa24.19■■□□□ 1.46
TTC3-225ENST00000540756 GFAPP14136 432 aa24.19■■□□□ 1.46
TTC3-225ENST00000540756 IMPDH1P20839 514 aa24.19■■□□□ 1.46
TTC3-225ENST00000540756 UNC50Q53HI1 259 aa24.19■■□□□ 1.46
TTC3-225ENST00000540756 YTHDF3Q7Z739 585 aaKnown RBP24.19■■□□□ 1.46
TTC3-225ENST00000540756 SLC22A9Q8IVM8 553 aa24.19■■□□□ 1.46
TTC3-225ENST00000540756 WDR75Q8IWA0 830 aaKnown RBP24.19■■□□□ 1.46
TTC3-225ENST00000540756 MAPK15Q8TD08 544 aa24.19■■□□□ 1.46
TTC3-225ENST00000540756 DCUN1D1Q96GG9 259 aa24.19■■□□□ 1.46
TTC3-225ENST00000540756 GABRG3Q99928 467 aa24.19■■□□□ 1.46
TTC3-225ENST00000540756 PLCD4Q9BRC7 762 aa24.19■■□□□ 1.46
TTC3-225ENST00000540756 ILKAPQ9H0C8 392 aaPredicted RBP24.19■■□□□ 1.46
TTC3-225ENST00000540756 CDH19Q9H159 772 aa24.19■■□□□ 1.46
TTC3-225ENST00000540756 GSTO2Q9H4Y5 243 aa24.19■■□□□ 1.46
TTC3-225ENST00000540756 ADAMTS6Q9UKP5 1117 aa24.19■■□□□ 1.46
TTC3-225ENST00000540756 PPP6CO00743 305 aa24.18■■□□□ 1.46
TTC3-225ENST00000540756 RNASEH1O60930 286 aaKnown RBP24.18■■□□□ 1.46
TTC3-225ENST00000540756 KIAA0754O94854 1291 aa24.18■■□□□ 1.46
TTC3-225ENST00000540756 MSH3P20585 1137 aa24.18■■□□□ 1.46
TTC3-225ENST00000540756 CDH13P55290 713 aa24.18■■□□□ 1.46
TTC3-225ENST00000540756 NFKB2Q00653 900 aa24.18■■□□□ 1.46
TTC3-225ENST00000540756 CYP2U1Q7Z449 544 aa24.18■■□□□ 1.46
TTC3-225ENST00000540756 CXorf40AQ8TE69 158 aa24.18■■□□□ 1.46
TTC3-225ENST00000540756 ESAMQ96AP7 390 aa24.18■■□□□ 1.46
TTC3-225ENST00000540756 PDLIM5Q96HC4 596 aaKnown RBP24.18■■□□□ 1.46
TTC3-225ENST00000540756 NSUN5Q96P11 429 aaKnown RBP24.18■■□□□ 1.46
TTC3-225ENST00000540756 LRRC37BQ96QE4 947 aa24.18■■□□□ 1.46
TTC3-225ENST00000540756 KDM4CQ9H3R0 1056 aa24.18■■□□□ 1.46
TTC3-225ENST00000540756 RAP2CQ9Y3L5 183 aa24.18■■□□□ 1.46
TTC3-225ENST00000540756 VCANP13611 3396 aa24.18■■□□□ 1.46
TTC3-225ENST00000540756 UBFD1O14562 309 aaKnown RBP24.18■■□□□ 1.46
TTC3-225ENST00000540756 NPC1O15118 1278 aa24.18■■□□□ 1.46
TTC3-225ENST00000540756 NPHS1O60500 1241 aa24.18■■□□□ 1.46
TTC3-225ENST00000540756 SUPT7LO94864 414 aa24.18■■□□□ 1.46
TTC3-225ENST00000540756 OR56A5P0C7T3 313 aa24.18■■□□□ 1.46
TTC3-225ENST00000540756 AGTR2P50052 363 aa24.18■■□□□ 1.46
TTC3-225ENST00000540756 CTSCP53634 463 aa24.18■■□□□ 1.46
TTC3-225ENST00000540756 HERVK_113P63132 956 aa24.18■■□□□ 1.46
TTC3-225ENST00000540756 SBSNQ6UWP8 590 aa24.18■■□□□ 1.46
TTC3-225ENST00000540756 CYHR1Q6ZMK1 362 aa24.18■■□□□ 1.46
TTC3-225ENST00000540756 RASGEF1AQ8N9B8 481 aa24.18■■□□□ 1.46
TTC3-225ENST00000540756 OR2T3Q8NH03 318 aa24.18■■□□□ 1.46
TTC3-225ENST00000540756 DLG3Q92796 817 aa24.18■■□□□ 1.46
TTC3-225ENST00000540756 L3HYPDHQ96EM0 354 aa24.18■■□□□ 1.46
TTC3-225ENST00000540756 PPP1R36Q96LQ0 422 aa24.18■■□□□ 1.46
TTC3-225ENST00000540756 VPS35Q96QK1 796 aa24.18■■□□□ 1.46
TTC3-225ENST00000540756 ERVK-6Q9BXR3 956 aa24.18■■□□□ 1.46
TTC3-225ENST00000540756 ASB1Q9Y576 335 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms