RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, human

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEMA4D-223	ENST00000540475	C9orf72	Q96LT7	481 aa		12.89	□□□□□ -0.35
SEMA4D-223	ENST00000540475	HEMGN	Q9BXL5	484 aa		12.89	□□□□□ -0.35
SEMA4D-223	ENST00000540475	OSBPL8	Q9BZF1	889 aa		12.89	□□□□□ -0.35
SEMA4D-223	ENST00000540475	SEMA5B	Q9P283	1151 aa		12.89	□□□□□ -0.35
SEMA4D-223	ENST00000540475	EPHA6	Q9UF33	1036 aa		12.89	□□□□□ -0.35
SEMA4D-223	ENST00000540475	SLC30A1	Q9Y6M5	507 aa		12.89	□□□□□ -0.35
SEMA4D-223	ENST00000540475	DUSP10	Q9Y6W6	482 aa		12.89	□□□□□ -0.35
SEMA4D-223	ENST00000540475	GLYATL1P3	A0A0U1RQE8	302 aa		12.88	□□□□□ -0.35
SEMA4D-223	ENST00000540475	CCDC66	A2RUB6	948 aa		12.88	□□□□□ -0.35
SEMA4D-223	ENST00000540475	SOWAHD	A6NJG2	315 aa		12.88	□□□□□ -0.35
SEMA4D-223	ENST00000540475	ZNF189	O75820	626 aa	Predicted RBP	12.88	□□□□□ -0.35
SEMA4D-223	ENST00000540475	ANXA9	O76027	345 aa		12.88	□□□□□ -0.35
SEMA4D-223	ENST00000540475	UBXN7	O94888	489 aa		12.88	□□□□□ -0.35
SEMA4D-223	ENST00000540475	VIP	P01282	170 aa		12.88	□□□□□ -0.35
SEMA4D-223	ENST00000540475	ITGB6	P18564	788 aa		12.88	□□□□□ -0.35
SEMA4D-223	ENST00000540475	ATP1A2	P50993	1020 aa		12.88	□□□□□ -0.35
SEMA4D-223	ENST00000540475	GEM	P55040	296 aa		12.88	□□□□□ -0.35
SEMA4D-223	ENST00000540475	OTUD4	Q01804	1114 aa	Known RBP	12.88	□□□□□ -0.35
SEMA4D-223	ENST00000540475	ITGA9	Q13797	1035 aa		12.88	□□□□□ -0.35
SEMA4D-223	ENST00000540475	MAP7	Q14244	749 aa		12.88	□□□□□ -0.35
SEMA4D-223	ENST00000540475	CLCA4	Q14CN2	919 aa		12.88	□□□□□ -0.35
SEMA4D-223	ENST00000540475	CHRNA6	Q15825	494 aa		12.88	□□□□□ -0.35
SEMA4D-223	ENST00000540475	CRTC3	Q6UUV7	619 aa		12.88	□□□□□ -0.35
SEMA4D-223	ENST00000540475	CEACAM20	Q6UY09	585 aa		12.88	□□□□□ -0.35
SEMA4D-223	ENST00000540475	RAD9B	Q6WBX8	426 aa		12.88	□□□□□ -0.35
SEMA4D-223	ENST00000540475	GLT6D1	Q7Z4J2	308 aa		12.88	□□□□□ -0.35
SEMA4D-223	ENST00000540475	SLC25A41	Q8N5S1	370 aa		12.88	□□□□□ -0.35
SEMA4D-223	ENST00000540475	RASGEF1A	Q8N9B8	481 aa		12.88	□□□□□ -0.35
SEMA4D-223	ENST00000540475	IPMK	Q8NFU5	416 aa		12.88	□□□□□ -0.35
SEMA4D-223	ENST00000540475	ACTL9	Q8TC94	416 aa		12.88	□□□□□ -0.35
SEMA4D-223	ENST00000540475	HAUS1	Q96CS2	278 aa		12.88	□□□□□ -0.35
SEMA4D-223	ENST00000540475	LACRT	Q9GZZ8	138 aa		12.88	□□□□□ -0.35
SEMA4D-223	ENST00000540475	RBSN	Q9H1K0	784 aa		12.88	□□□□□ -0.35
SEMA4D-223	ENST00000540475	ARNT2	Q9HBZ2	717 aa		12.88	□□□□□ -0.35
SEMA4D-223	ENST00000540475	RSPH14	Q9UHP6	348 aa		12.88	□□□□□ -0.35
SEMA4D-223	ENST00000540475	WDR37	Q9Y2I8	494 aa		12.88	□□□□□ -0.35
SEMA4D-223	ENST00000540475	AAR2	Q9Y312	384 aa	Known RBP	12.88	□□□□□ -0.35
SEMA4D-223	ENST00000540475	TLN1	Q9Y490	2541 aa	Known RBP	12.88	□□□□□ -0.35
SEMA4D-223	ENST00000540475	PIKFYVE	Q9Y2I7	2098 aa		12.87	□□□□□ -0.35
SEMA4D-223	ENST00000540475	KLHL33	A6NCF5	533 aa		12.87	□□□□□ -0.35
SEMA4D-223	ENST00000540475	GOLGA6L3	A6NEY3	463 aa		12.87	□□□□□ -0.35
SEMA4D-223	ENST00000540475	C5orf60	A6NFR6	353 aa		12.87	□□□□□ -0.35
SEMA4D-223	ENST00000540475		A8MU76	341 aa		12.87	□□□□□ -0.35
SEMA4D-223	ENST00000540475	CAPN5	O15484	640 aa	Predicted RBP	12.87	□□□□□ -0.35
SEMA4D-223	ENST00000540475	UGT1A9	O60656	530 aa		12.87	□□□□□ -0.35
SEMA4D-223	ENST00000540475	RAD1	O60671	282 aa		12.87	□□□□□ -0.35
SEMA4D-223	ENST00000540475	AGT	P01019	485 aa		12.87	□□□□□ -0.35
SEMA4D-223	ENST00000540475	SLC4A1	P02730	911 aa		12.87	□□□□□ -0.35
SEMA4D-223	ENST00000540475	LIF	P15018	202 aa		12.87	□□□□□ -0.35
SEMA4D-223	ENST00000540475	VCL	P18206	1134 aa		12.87	□□□□□ -0.35
SEMA4D-223	ENST00000540475	UGT1A6	P19224	532 aa		12.87	□□□□□ -0.35
SEMA4D-223	ENST00000540475	UGT1A1	P22309	533 aa		12.87	□□□□□ -0.35
SEMA4D-223	ENST00000540475	UGT1A4	P22310	534 aa		12.87	□□□□□ -0.35
SEMA4D-223	ENST00000540475	MAP4	P27816	1152 aa	Known RBP	12.87	□□□□□ -0.35
SEMA4D-223	ENST00000540475	TNNT3	P45378	269 aa	Predicted RBP	12.87	□□□□□ -0.35
SEMA4D-223	ENST00000540475	CTSC	P53634	463 aa		12.87	□□□□□ -0.35
SEMA4D-223	ENST00000540475	RWDD2B	P57060	319 aa		12.87	□□□□□ -0.35
SEMA4D-223	ENST00000540475	TAF1A	Q15573	450 aa	Predicted RBP	12.87	□□□□□ -0.35
SEMA4D-223	ENST00000540475	TBR1	Q16650	682 aa		12.87	□□□□□ -0.35
SEMA4D-223	ENST00000540475	CRTC2	Q53ET0	693 aa	Predicted RBP	12.87	□□□□□ -0.35
SEMA4D-223	ENST00000540475	ANKRD20A2	Q5SQ80	823 aa		12.87	□□□□□ -0.35
SEMA4D-223	ENST00000540475	GPRC6A	Q5T6X5	926 aa		12.87	□□□□□ -0.35
SEMA4D-223	ENST00000540475	ANKRD20A1	Q5TYW2	823 aa		12.87	□□□□□ -0.35
SEMA4D-223	ENST00000540475	ANKRD20A3	Q5VUR7	823 aa		12.87	□□□□□ -0.35
SEMA4D-223	ENST00000540475	METRNL	Q641Q3	311 aa		12.87	□□□□□ -0.35
SEMA4D-223	ENST00000540475	ITPRIPL1	Q6GPH6	555 aa		12.87	□□□□□ -0.35
SEMA4D-223	ENST00000540475	TIPARP	Q7Z3E1	657 aa	Known RBP	12.87	□□□□□ -0.35
SEMA4D-223	ENST00000540475	AMZ2	Q86W34	360 aa		12.87	□□□□□ -0.35
SEMA4D-223	ENST00000540475	FAM129C	Q86XR2	697 aa		12.87	□□□□□ -0.35
SEMA4D-223	ENST00000540475	ZNF398	Q8TD17	642 aa		12.87	□□□□□ -0.35
SEMA4D-223	ENST00000540475	BLOC1S5	Q8TDH9	187 aa		12.87	□□□□□ -0.35
SEMA4D-223	ENST00000540475	KLHL6	Q8WZ60	621 aa		12.87	□□□□□ -0.35
SEMA4D-223	ENST00000540475	ZNF514	Q96K75	400 aa	Predicted RBP	12.87	□□□□□ -0.35
SEMA4D-223	ENST00000540475	LINC00615	Q96LM1	132 aa	Predicted RBP	12.87	□□□□□ -0.35
SEMA4D-223	ENST00000540475	ZCCHC2	Q9C0B9	1178 aa	Known RBP	12.87	□□□□□ -0.35
SEMA4D-223	ENST00000540475	OSGEPL1	Q9H4B0	414 aa		12.87	□□□□□ -0.35
SEMA4D-223	ENST00000540475	ZNF768	Q9H5H4	540 aa	Known RBP	12.87	□□□□□ -0.35
SEMA4D-223	ENST00000540475	C10orf88	Q9H8K7	445 aa		12.87	□□□□□ -0.35
SEMA4D-223	ENST00000540475	UGT1A7	Q9HAW7	530 aa		12.87	□□□□□ -0.35
SEMA4D-223	ENST00000540475	UGT1A10	Q9HAW8	530 aa		12.87	□□□□□ -0.35
SEMA4D-223	ENST00000540475	UGT1A8	Q9HAW9	530 aa		12.87	□□□□□ -0.35
SEMA4D-223	ENST00000540475	STARD5	Q9NSY2	213 aa		12.87	□□□□□ -0.35
SEMA4D-223	ENST00000540475	DNAJC16	Q9Y2G8	782 aa		12.87	□□□□□ -0.35
SEMA4D-223	ENST00000540475	PKP3	Q9Y446	797 aa		12.87	□□□□□ -0.35
SEMA4D-223	ENST00000540475	ASH1L	Q9NR48	2969 aa	Known RBP	12.87	□□□□□ -0.35
SEMA4D-223	ENST00000540475	SPEN	Q96T58	3664 aa	Known RBP	12.86	□□□□□ -0.35
SEMA4D-223	ENST00000540475	GRID2IP	A4D2P6	1211 aa		12.86	□□□□□ -0.35
SEMA4D-223	ENST00000540475	OR52A4P	A6NMU1	304 aa		12.86	□□□□□ -0.35
SEMA4D-223	ENST00000540475	PDZK1P1	A8MUH7	402 aa		12.86	□□□□□ -0.35
SEMA4D-223	ENST00000540475		H7C0C1	242 aa		12.86	□□□□□ -0.35
SEMA4D-223	ENST00000540475	SGTA	O43765	313 aa		12.86	□□□□□ -0.35
SEMA4D-223	ENST00000540475	POP7	O75817	140 aa	Known RBP	12.86	□□□□□ -0.35
SEMA4D-223	ENST00000540475	TJP3	O95049	919 aa		12.86	□□□□□ -0.35
SEMA4D-223	ENST00000540475	DLGAP3	O95886	979 aa		12.86	□□□□□ -0.35
SEMA4D-223	ENST00000540475	RBP3	P10745	1247 aa		12.86	□□□□□ -0.35
SEMA4D-223	ENST00000540475	PYGM	P11217	842 aa		12.86	□□□□□ -0.35
SEMA4D-223	ENST00000540475	SFTPC	P11686	197 aa		12.86	□□□□□ -0.35
SEMA4D-223	ENST00000540475	LPO	P22079	712 aa	Predicted RBP	12.86	□□□□□ -0.35
SEMA4D-223	ENST00000540475	RPL10	P27635	214 aa	Known RBP	12.86	□□□□□ -0.35
SEMA4D-223	ENST00000540475	CAPZB	P47756	277 aa		12.86	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms