RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 KIAA1328Q86T90 577 aa16.5■□□□□ 0.23
DDB1-215ENST00000539712 DDHD1Q8NEL9 900 aa16.5■□□□□ 0.23
DDB1-215ENST00000539712 TAAR9Q96RI9 348 aa16.5■□□□□ 0.23
DDB1-215ENST00000539712 FSD1LQ9BXM9 530 aa16.5■□□□□ 0.23
DDB1-215ENST00000539712 OSGEPL1Q9H4B0 414 aa16.5■□□□□ 0.23
DDB1-215ENST00000539712 WASH6PQ9NQA3 447 aa16.5■□□□□ 0.23
DDB1-215ENST00000539712 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.5■□□□□ 0.23
DDB1-215ENST00000539712 IMPACTQ9P2X3 320 aa16.5■□□□□ 0.23
DDB1-215ENST00000539712 WDR37Q9Y2I8 494 aa16.5■□□□□ 0.23
DDB1-215ENST00000539712 R3HDM2Q9Y2K5 976 aaKnown RBP16.5■□□□□ 0.23
DDB1-215ENST00000539712 B3GALT1Q9Y5Z6 326 aa16.5■□□□□ 0.23
DDB1-215ENST00000539712 BSNQ9UPA5 3926 aa16.49■□□□□ 0.23
DDB1-215ENST00000539712 LILRA5A6NI73 299 aa16.49■□□□□ 0.23
DDB1-215ENST00000539712 B4E171 279 aa16.49■□□□□ 0.23
DDB1-215ENST00000539712 ERVH48-1M5A8F1 160 aa16.49■□□□□ 0.23
DDB1-215ENST00000539712 FTCDO95954 541 aa16.49■□□□□ 0.23
DDB1-215ENST00000539712 RPL10P27635 214 aaKnown RBP16.49■□□□□ 0.23
DDB1-215ENST00000539712 TSPAN7P41732 249 aa16.49■□□□□ 0.23
DDB1-215ENST00000539712 XIAPP98170 497 aa16.49■□□□□ 0.23
DDB1-215ENST00000539712 RHDQ02161 417 aa16.49■□□□□ 0.23
DDB1-215ENST00000539712 CLCA4Q14CN2 919 aa16.49■□□□□ 0.23
DDB1-215ENST00000539712 KIAA1614Q5VZ46 1190 aa16.49■□□□□ 0.23
DDB1-215ENST00000539712 XKR5Q6UX68 686 aa16.49■□□□□ 0.23
DDB1-215ENST00000539712 FAM83HQ6ZRV2 1179 aaPredicted RBP16.49■□□□□ 0.23
DDB1-215ENST00000539712 TMEM26Q6ZUK4 368 aa16.49■□□□□ 0.23
DDB1-215ENST00000539712 PEX26Q7Z412 305 aa16.49■□□□□ 0.23
DDB1-215ENST00000539712 SPC24Q8NBT2 197 aa16.49■□□□□ 0.23
DDB1-215ENST00000539712 BRSK1Q8TDC3 778 aa16.49■□□□□ 0.23
DDB1-215ENST00000539712 NCSTNQ92542 709 aa16.49■□□□□ 0.23
DDB1-215ENST00000539712 ART4Q93070 314 aa16.49■□□□□ 0.23
DDB1-215ENST00000539712 WBP1Q96G27 269 aa16.49■□□□□ 0.23
DDB1-215ENST00000539712 AHCYL2Q96HN2 611 aaKnown RBP16.49■□□□□ 0.23
DDB1-215ENST00000539712 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.49■□□□□ 0.23
DDB1-215ENST00000539712 SPRY4Q9C004 299 aa16.49■□□□□ 0.23
DDB1-215ENST00000539712 ARNT2Q9HBZ2 717 aa16.49■□□□□ 0.23
DDB1-215ENST00000539712 SLC40A1Q9NP59 571 aa16.49■□□□□ 0.23
DDB1-215ENST00000539712 SMOXQ9NWM0 555 aa16.49■□□□□ 0.23
DDB1-215ENST00000539712 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.49■□□□□ 0.23
DDB1-215ENST00000539712 AKAP7Q9P0M2 348 aaPredicted RBP16.49■□□□□ 0.23
DDB1-215ENST00000539712 AMFRQ9UKV5 643 aa16.49■□□□□ 0.23
DDB1-215ENST00000539712 AAR2Q9Y312 384 aaKnown RBP16.49■□□□□ 0.23
DDB1-215ENST00000539712 PKP3Q9Y446 797 aa16.49■□□□□ 0.23
DDB1-215ENST00000539712 CAPN6Q9Y6Q1 641 aa16.49■□□□□ 0.23
DDB1-215ENST00000539712 C5orf60A6NFR6 353 aa16.48■□□□□ 0.23
DDB1-215ENST00000539712 OR52A4PA6NMU1 304 aa16.48■□□□□ 0.23
DDB1-215ENST00000539712 AGAP14A8MT82 685 aa16.48■□□□□ 0.23
DDB1-215ENST00000539712 A8MU76 341 aa16.48■□□□□ 0.23
DDB1-215ENST00000539712 SGTAO43765 313 aa16.48■□□□□ 0.23
DDB1-215ENST00000539712 LPOP22079 712 aaPredicted RBP16.48■□□□□ 0.23
DDB1-215ENST00000539712 CD82P27701 267 aa16.48■□□□□ 0.23
DDB1-215ENST00000539712 CSTF2P33240 577 aaKnown RBP eCLIP16.48■□□□□ 0.23
DDB1-215ENST00000539712 TNNT3P45378 269 aaPredicted RBP16.48■□□□□ 0.23
DDB1-215ENST00000539712 DRG2P55039 364 aaKnown RBP16.48■□□□□ 0.23
DDB1-215ENST00000539712 DMPKQ09013 629 aa16.48■□□□□ 0.23
DDB1-215ENST00000539712 KIF5AQ12840 1032 aa16.48■□□□□ 0.23
DDB1-215ENST00000539712 SPARCL1Q14515 664 aa16.48■□□□□ 0.23
DDB1-215ENST00000539712 TAF1AQ15573 450 aaPredicted RBP16.48■□□□□ 0.23
DDB1-215ENST00000539712 SEPT7Q16181 437 aaKnown RBP16.48■□□□□ 0.23
DDB1-215ENST00000539712 LDLRAP1Q5SW96 308 aa16.48■□□□□ 0.23
DDB1-215ENST00000539712 KCTD11Q693B1 232 aa16.48■□□□□ 0.23
DDB1-215ENST00000539712 VASH2Q86V25 355 aa16.48■□□□□ 0.23
DDB1-215ENST00000539712 TRAPPC5Q8IUR0 188 aa16.48■□□□□ 0.23
DDB1-215ENST00000539712 OR4K2Q8NGD2 314 aa16.48■□□□□ 0.23
DDB1-215ENST00000539712 GDAP1Q8TB36 358 aa16.48■□□□□ 0.23
DDB1-215ENST00000539712 SLC35B2Q8TB61 432 aa16.48■□□□□ 0.23
DDB1-215ENST00000539712 ZNF398Q8TD17 642 aa16.48■□□□□ 0.23
DDB1-215ENST00000539712 HES6Q96HZ4 224 aa16.48■□□□□ 0.23
DDB1-215ENST00000539712 DDA1Q9BW61 102 aa16.48■□□□□ 0.23
DDB1-215ENST00000539712 MN1Q10571 1320 aaPredicted RBP16.47■□□□□ 0.23
DDB1-215ENST00000539712 EFCAB7A8K855 629 aa16.47■□□□□ 0.23
DDB1-215ENST00000539712 PDZK1P1A8MUH7 402 aa16.47■□□□□ 0.23
DDB1-215ENST00000539712 MIF4GDA9UHW6 222 aaKnown RBP16.47■□□□□ 0.23
DDB1-215ENST00000539712 STX7O15400 261 aaKnown RBP16.47■□□□□ 0.23
DDB1-215ENST00000539712 POP7O75817 140 aaKnown RBP16.47■□□□□ 0.23
DDB1-215ENST00000539712 METTL18O95568 372 aa16.47■□□□□ 0.23
DDB1-215ENST00000539712 C9P02748 559 aa16.47■□□□□ 0.23
DDB1-215ENST00000539712 IDSP22304 550 aa16.47■□□□□ 0.23
DDB1-215ENST00000539712 MAPK9P45984 424 aa16.47■□□□□ 0.23
DDB1-215ENST00000539712 GFERP55789 205 aa16.47■□□□□ 0.23
DDB1-215ENST00000539712 MC2RQ01718 297 aa16.47■□□□□ 0.23
DDB1-215ENST00000539712 SNAP47Q5SQN1 464 aa16.47■□□□□ 0.23
DDB1-215ENST00000539712 TMEM164Q5U3C3 297 aa16.47■□□□□ 0.23
DDB1-215ENST00000539712 TMEM220Q6QAJ8 160 aa16.47■□□□□ 0.23
DDB1-215ENST00000539712 MICALCLQ6ZW33 695 aa16.47■□□□□ 0.23
DDB1-215ENST00000539712 AMZ2Q86W34 360 aa16.47■□□□□ 0.23
DDB1-215ENST00000539712 ZNF843Q8N446 348 aa16.47■□□□□ 0.23
DDB1-215ENST00000539712 FAM71DQ8N9W8 422 aa16.47■□□□□ 0.23
DDB1-215ENST00000539712 AVL9Q8NBF6 648 aa16.47■□□□□ 0.23
DDB1-215ENST00000539712 NAT14Q8WUY8 206 aa16.47■□□□□ 0.23
DDB1-215ENST00000539712 NKD1Q969G9 470 aa16.47■□□□□ 0.23
DDB1-215ENST00000539712 SEMA4CQ9C0C4 833 aa16.47■□□□□ 0.23
DDB1-215ENST00000539712 EPB41L1Q9H4G0 881 aa16.47■□□□□ 0.23
DDB1-215ENST00000539712 STN1Q9H668 368 aaKnown RBP16.47■□□□□ 0.23
DDB1-215ENST00000539712 SLC39A1Q9NY26 324 aa16.47■□□□□ 0.23
DDB1-215ENST00000539712 FKBPLQ9UIM3 349 aa16.47■□□□□ 0.23
DDB1-215ENST00000539712 ZNF106Q9H2Y7 1883 aaKnown RBP16.47■□□□□ 0.23
DDB1-215ENST00000539712 COL6A6A6NMZ7 2263 aa16.47■□□□□ 0.23
DDB1-215ENST00000539712 TLN1Q9Y490 2541 aaKnown RBP16.46■□□□□ 0.23
DDB1-215ENST00000539712 LDB2O43679 373 aa16.46■□□□□ 0.23
DDB1-215ENST00000539712 KCNJ13O60928 360 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms