RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 LRRK1Q38SD2 2015 aa13.94□□□□□ -0.18
ACTN1-205ENST00000538545 PIP5K1BO14986 540 aa13.94□□□□□ -0.18
ACTN1-205ENST00000538545 PEX11AO75192 247 aa13.94□□□□□ -0.18
ACTN1-205ENST00000538545 KATNA1O75449 491 aa13.94□□□□□ -0.18
ACTN1-205ENST00000538545 SOX9P48436 509 aa13.94□□□□□ -0.18
ACTN1-205ENST00000538545 PIK3CGP48736 1102 aa13.94□□□□□ -0.18
ACTN1-205ENST00000538545 ATXN3P54252 364 aaPredicted RBP13.94□□□□□ -0.18
ACTN1-205ENST00000538545 SESN3P58005 492 aa13.94□□□□□ -0.18
ACTN1-205ENST00000538545 HSPA14Q0VDF9 509 aa13.94□□□□□ -0.18
ACTN1-205ENST00000538545 UGT3A2Q3SY77 523 aa13.94□□□□□ -0.18
ACTN1-205ENST00000538545 GRAMD4Q6IC98 578 aa13.94□□□□□ -0.18
ACTN1-205ENST00000538545 PARS2Q7L3T8 475 aaKnown RBP13.94□□□□□ -0.18
ACTN1-205ENST00000538545 KIAA0907Q7Z7F0 614 aaPredicted RBP13.94□□□□□ -0.18
ACTN1-205ENST00000538545 TRIM74Q86UV6 250 aa13.94□□□□□ -0.18
ACTN1-205ENST00000538545 TMPRSS6Q8IU80 811 aa13.94□□□□□ -0.18
ACTN1-205ENST00000538545 ETFBKMTQ8IXQ9 262 aa13.94□□□□□ -0.18
ACTN1-205ENST00000538545 DEFB107AQ8IZN7 70 aa13.94□□□□□ -0.18
ACTN1-205ENST00000538545 HIPK4Q8NE63 616 aa13.94□□□□□ -0.18
ACTN1-205ENST00000538545 SKA2Q8WVK7 121 aaPredicted RBP13.94□□□□□ -0.18
ACTN1-205ENST00000538545 LYSMD1Q96S90 227 aa13.94□□□□□ -0.18
ACTN1-205ENST00000538545 LATS2Q9NRM7 1088 aa13.94□□□□□ -0.18
ACTN1-205ENST00000538545 CCDC167Q9P0B6 97 aa13.94□□□□□ -0.18
ACTN1-205ENST00000538545 IL36AQ9UHA7 158 aa13.94□□□□□ -0.18
ACTN1-205ENST00000538545 SLC7A8Q9UHI5 535 aa13.94□□□□□ -0.18
ACTN1-205ENST00000538545 COL6A3P12111 3177 aa13.94□□□□□ -0.18
ACTN1-205ENST00000538545 TRBV5-4A0A0C4DH59 114 aa13.94□□□□□ -0.18
ACTN1-205ENST00000538545 TMEM202A6NGA9 273 aa13.94□□□□□ -0.18
ACTN1-205ENST00000538545 C16orf96A6NNT2 1141 aa13.94□□□□□ -0.18
ACTN1-205ENST00000538545 STX16-NPEPL1H3BU86 382 aa13.94□□□□□ -0.18
ACTN1-205ENST00000538545 PFDN6O15212 129 aa13.94□□□□□ -0.18
ACTN1-205ENST00000538545 INPP4BO15327 924 aa13.94□□□□□ -0.18
ACTN1-205ENST00000538545 AKT1P31749 480 aa13.94□□□□□ -0.18
ACTN1-205ENST00000538545 GRB7Q14451 532 aa13.94□□□□□ -0.18
ACTN1-205ENST00000538545 FNDC3BQ53EP0 1204 aaKnown RBP13.94□□□□□ -0.18
ACTN1-205ENST00000538545 SYCE2Q6PIF2 218 aa13.94□□□□□ -0.18
ACTN1-205ENST00000538545 VITQ6UXI7 678 aa13.94□□□□□ -0.18
ACTN1-205ENST00000538545 LILRA3Q8N6C8 439 aaPredicted RBP13.94□□□□□ -0.18
ACTN1-205ENST00000538545 CHFRQ96EP1 664 aa13.94□□□□□ -0.18
ACTN1-205ENST00000538545 TUBGCP5Q96RT8 1024 aa13.94□□□□□ -0.18
ACTN1-205ENST00000538545 NPAS2Q99743 824 aa13.94□□□□□ -0.18
ACTN1-205ENST00000538545 CEP44Q9C0F1 390 aa13.94□□□□□ -0.18
ACTN1-205ENST00000538545 FBXO10Q9UK96 956 aa13.94□□□□□ -0.18
ACTN1-205ENST00000538545 VPS9D1Q9Y2B5 631 aa13.94□□□□□ -0.18
ACTN1-205ENST00000538545 NUP210Q8TEM1 1887 aaPredicted RBP13.94□□□□□ -0.18
ACTN1-205ENST00000538545 FADS2P1A8MWK0 482 aa13.93□□□□□ -0.18
ACTN1-205ENST00000538545 KRT36O76013 467 aa13.93□□□□□ -0.18
ACTN1-205ENST00000538545 ITGAXP20702 1163 aa13.93□□□□□ -0.18
ACTN1-205ENST00000538545 FCARP24071 287 aa13.93□□□□□ -0.18
ACTN1-205ENST00000538545 CCR7P32248 378 aa13.93□□□□□ -0.18
ACTN1-205ENST00000538545 HSPA7P48741 367 aa13.93□□□□□ -0.18
ACTN1-205ENST00000538545 NUDT2P50583 147 aa13.93□□□□□ -0.18
ACTN1-205ENST00000538545 NFKB2Q00653 900 aa13.93□□□□□ -0.18
ACTN1-205ENST00000538545 BOP1Q14137 746 aaKnown RBP13.93□□□□□ -0.18
ACTN1-205ENST00000538545 PLA2G4EQ3MJ16 856 aa13.93□□□□□ -0.18
ACTN1-205ENST00000538545 GPRC6AQ5T6X5 926 aa13.93□□□□□ -0.18
ACTN1-205ENST00000538545 CERS6Q6ZMG9 384 aa13.93□□□□□ -0.18
ACTN1-205ENST00000538545 FRA10AC1Q70Z53 315 aa13.93□□□□□ -0.18
ACTN1-205ENST00000538545 SYVN1Q86TM6 617 aa13.93□□□□□ -0.18
ACTN1-205ENST00000538545 METTL3Q86U44 580 aaKnown RBP13.93□□□□□ -0.18
ACTN1-205ENST00000538545 ULK2Q8IYT8 1036 aa13.93□□□□□ -0.18
ACTN1-205ENST00000538545 RCN3Q96D15 328 aa13.93□□□□□ -0.18
ACTN1-205ENST00000538545 ZNF641Q96N77 438 aaPredicted RBP13.93□□□□□ -0.18
ACTN1-205ENST00000538545 RIOK2Q9BVS4 552 aaKnown RBP13.93□□□□□ -0.18
ACTN1-205ENST00000538545 EML4Q9HC35 981 aaKnown RBP13.93□□□□□ -0.18
ACTN1-205ENST00000538545 GON4LQ3T8J9 2241 aa13.93□□□□□ -0.18
ACTN1-205ENST00000538545 KNL1Q8NG31 2342 aa13.93□□□□□ -0.18
ACTN1-205ENST00000538545 ZNF106Q9H2Y7 1883 aaKnown RBP13.93□□□□□ -0.18
ACTN1-205ENST00000538545 TRIOBPQ9H2D6 2365 aa13.93□□□□□ -0.18
ACTN1-205ENST00000538545 A0A088AWK7 358 aa13.93□□□□□ -0.18
ACTN1-205ENST00000538545 SLC9A3R1O14745 358 aaPredicted RBP13.93□□□□□ -0.18
ACTN1-205ENST00000538545 SNX2O60749 519 aa13.93□□□□□ -0.18
ACTN1-205ENST00000538545 ALDOCP09972 364 aaKnown RBP13.93□□□□□ -0.18
ACTN1-205ENST00000538545 HOXB8P17481 243 aaPredicted RBP13.93□□□□□ -0.18
ACTN1-205ENST00000538545 ATP6V0D1P61421 351 aa13.93□□□□□ -0.18
ACTN1-205ENST00000538545 RBBP7Q16576 425 aa13.93□□□□□ -0.18
ACTN1-205ENST00000538545 RAB44Q7Z6P3 723 aaPredicted RBP13.93□□□□□ -0.18
ACTN1-205ENST00000538545 NUDT8Q8WV74 236 aa13.93□□□□□ -0.18
ACTN1-205ENST00000538545 TWIST2Q8WVJ9 160 aa13.93□□□□□ -0.18
ACTN1-205ENST00000538545 FGF14Q92915 247 aa13.93□□□□□ -0.18
ACTN1-205ENST00000538545 MAELQ96JY0 434 aaKnown RBP13.93□□□□□ -0.18
ACTN1-205ENST00000538545 COPS8Q99627 209 aa13.93□□□□□ -0.18
ACTN1-205ENST00000538545 FAM83CQ9BQN1 747 aa13.93□□□□□ -0.18
ACTN1-205ENST00000538545 TUBB6Q9BUF5 446 aa13.93□□□□□ -0.18
ACTN1-205ENST00000538545 SFXN1Q9H9B4 322 aa13.93□□□□□ -0.18
ACTN1-205ENST00000538545 CACNA2D2Q9NY47 1150 aa13.93□□□□□ -0.18
ACTN1-205ENST00000538545 GNPTGQ9UJJ9 305 aa13.93□□□□□ -0.18
ACTN1-205ENST00000538545 PCTPQ9UKL6 214 aa13.93□□□□□ -0.18
ACTN1-205ENST00000538545 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.93□□□□□ -0.18
ACTN1-205ENST00000538545 TBC1D3BA6NDS4 549 aa13.92□□□□□ -0.18
ACTN1-205ENST00000538545 CFLARO15519 480 aa13.92□□□□□ -0.18
ACTN1-205ENST00000538545 OR4F21O95013 312 aa13.92□□□□□ -0.18
ACTN1-205ENST00000538545 ADH1CP00326 375 aa13.92□□□□□ -0.18
ACTN1-205ENST00000538545 PPARGP37231 505 aaPredicted RBP13.92□□□□□ -0.18
ACTN1-205ENST00000538545 ANKS6Q68DC2 871 aa13.92□□□□□ -0.18
ACTN1-205ENST00000538545 HPS6Q86YV9 775 aa13.92□□□□□ -0.18
ACTN1-205ENST00000538545 SCUBE1Q8IWY4 988 aa13.92□□□□□ -0.18
ACTN1-205ENST00000538545 CDYL2Q8N8U2 506 aa13.92□□□□□ -0.18
ACTN1-205ENST00000538545 OTUB2Q96DC9 234 aa13.92□□□□□ -0.18
ACTN1-205ENST00000538545 C19orf60Q96EN9 201 aa13.92□□□□□ -0.18
ACTN1-205ENST00000538545 MYADMQ96S97 322 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms