RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 CALML5Q9NZT1 146 aa16.66■□□□□ 0.26
SCARB1-205ENST00000538291 FBXW2Q9UKT8 454 aa16.66■□□□□ 0.26
SCARB1-205ENST00000538291 KRT36O76013 467 aa16.66■□□□□ 0.26
SCARB1-205ENST00000538291 AVPR1BP47901 424 aa16.66■□□□□ 0.26
SCARB1-205ENST00000538291 ARHGDIBP52566 201 aa16.66■□□□□ 0.26
SCARB1-205ENST00000538291 CHIT1Q13231 466 aa16.66■□□□□ 0.26
SCARB1-205ENST00000538291 AAGABQ6PD74 315 aa16.66■□□□□ 0.26
SCARB1-205ENST00000538291 PPM1MQ96MI6 270 aa16.66■□□□□ 0.26
SCARB1-205ENST00000538291 TRMT13Q9NUP7 481 aaKnown RBP16.66■□□□□ 0.26
SCARB1-205ENST00000538291 ALKBH4Q9NXW9 302 aa16.66■□□□□ 0.26
SCARB1-205ENST00000538291 PRODHO43272 600 aa16.66■□□□□ 0.26
SCARB1-205ENST00000538291 GMFGO60234 142 aa16.66■□□□□ 0.26
SCARB1-205ENST00000538291 UGT2B11O75310 529 aa16.66■□□□□ 0.26
SCARB1-205ENST00000538291 PDX1P52945 283 aa16.66■□□□□ 0.26
SCARB1-205ENST00000538291 OLR1P78380 273 aa16.66■□□□□ 0.26
SCARB1-205ENST00000538291 PRR5P85299 388 aa16.66■□□□□ 0.26
SCARB1-205ENST00000538291 DCTN2Q13561 401 aaKnown RBP16.66■□□□□ 0.26
SCARB1-205ENST00000538291 HNRNPDQ14103 355 aaKnown RBP16.66■□□□□ 0.26
SCARB1-205ENST00000538291 GK5Q6ZS86 529 aa16.66■□□□□ 0.26
SCARB1-205ENST00000538291 ZMIZ2Q8NF64 920 aa16.66■□□□□ 0.26
SCARB1-205ENST00000538291 ZCCHC10Q8TBK6 192 aa16.66■□□□□ 0.26
SCARB1-205ENST00000538291 CCDC28BQ9BUN5 200 aa16.66■□□□□ 0.26
SCARB1-205ENST00000538291 IKZF4Q9H2S9 585 aa16.66■□□□□ 0.26
SCARB1-205ENST00000538291 WDR55Q9H6Y2 383 aaPredicted RBP16.66■□□□□ 0.26
SCARB1-205ENST00000538291 MAP4K5Q9Y4K4 846 aa16.66■□□□□ 0.26
SCARB1-205ENST00000538291 ASB3Q9Y575 518 aa16.66■□□□□ 0.26
SCARB1-205ENST00000538291 MAP2P11137 1827 aaKnown RBP16.66■□□□□ 0.26
SCARB1-205ENST00000538291 SOWAHBA6NEL2 793 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 MAP2K7O14733 419 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 PCSK2P16519 638 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 CBX5P45973 191 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 HKDC1Q2TB90 917 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 SULT1C3Q6IMI6 304 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 GALNT7Q86SF2 657 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 BRSK1Q8TDC3 778 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 DSN1Q9H410 356 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 TIMM22Q9Y584 194 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 MYBPHLA2RUH7 354 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 KERAO60938 352 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 KCNA5P22460 613 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 ACLYP53396 1101 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 DAOAP59103 153 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 LCP2Q13094 533 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 GTF2H2Q13888 395 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 TSTD2Q5T7W7 516 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 IL23RQ5VWK5 629 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 GLYATQ6IB77 296 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 GTF2H2CQ6P1K8 395 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 FUBP3Q96I24 572 aaKnown RBP eCLIP16.65■□□□□ 0.26
SCARB1-205ENST00000538291 CDH7Q9ULB5 785 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 A0A0G2JLL6 359 aaPredicted RBP16.65■□□□□ 0.26
SCARB1-205ENST00000538291 CCDC162PA2VCL2 907 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 IFNW1P05000 195 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 C8GP07360 202 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 CDKN2BP42772 138 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 CLCQ05315 142 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 KCTD21Q4G0X4 260 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 LDLRAP1Q5SW96 308 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 PRRT2Q7Z6L0 340 aaPredicted RBP16.65■□□□□ 0.26
SCARB1-205ENST00000538291 LDB1Q86U70 411 aaPredicted RBP16.65■□□□□ 0.26
SCARB1-205ENST00000538291 CIR1Q86X95 450 aaPredicted RBP16.65■□□□□ 0.26
SCARB1-205ENST00000538291 SAMD14Q8IZD0 417 aaPredicted RBP16.65■□□□□ 0.26
SCARB1-205ENST00000538291 C4orf32Q8N8J7 132 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 RIT1Q92963 219 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 NKD2Q969F2 451 aaPredicted RBP16.65■□□□□ 0.26
SCARB1-205ENST00000538291 SLC38A4Q969I6 547 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 CIDEBQ9UHD4 219 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 COL3A1P02461 1466 aaPredicted RBP16.65■□□□□ 0.26
SCARB1-205ENST00000538291 TCEA3O75764 348 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 ESR1P03372 595 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 IL12BP29460 328 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 PTDSS1P48651 473 aaKnown RBP16.65■□□□□ 0.26
SCARB1-205ENST00000538291 FPGSQ05932 587 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 SNAPC1Q16533 368 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 TPGS2Q68CL5 300 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 DENND5AQ6IQ26 1287 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 YTHDF3Q7Z739 585 aaKnown RBP16.65■□□□□ 0.26
SCARB1-205ENST00000538291 RASSF5Q8WWW0 418 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 ATRNO75882 1429 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 RIIAD1A6NNX1 92 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 FAUP35544 74 aaKnown RBP16.65■□□□□ 0.26
SCARB1-205ENST00000538291 CCT3P49368 545 aaKnown RBP16.65■□□□□ 0.26
SCARB1-205ENST00000538291 PCDH1Q08174 1060 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 CDH24Q86UP0 819 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 HDDC3Q8N4P3 179 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 SPATA22Q8NHS9 363 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 JSRP1Q96MG2 331 aaPredicted RBP16.65■□□□□ 0.26
SCARB1-205ENST00000538291 C1QTNF1Q9BXJ1 281 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 PLGRKTQ9HBL7 147 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 U3KQV3 271 aa16.65■□□□□ 0.26
SCARB1-205ENST00000538291 CHST10O43529 356 aa16.64■□□□□ 0.25
SCARB1-205ENST00000538291 ENTPD5O75356 428 aa16.64■□□□□ 0.25
SCARB1-205ENST00000538291 ACRP10323 421 aa16.64■□□□□ 0.25
SCARB1-205ENST00000538291 PTGER3P43115 390 aa16.64■□□□□ 0.25
SCARB1-205ENST00000538291 RBBP4Q09028 425 aa16.64■□□□□ 0.25
SCARB1-205ENST00000538291 HEPACAMQ14CZ8 416 aa16.64■□□□□ 0.25
SCARB1-205ENST00000538291 CRYBG2Q8N1P7 616 aa16.64■□□□□ 0.25
SCARB1-205ENST00000538291 MTMR14Q8NCE2 650 aa16.64■□□□□ 0.25
SCARB1-205ENST00000538291 RNF31Q96EP0 1072 aa16.64■□□□□ 0.25
SCARB1-205ENST00000538291 FCRL4Q96PJ5 515 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms