RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 E2F5Q15329 346 aa13.23□□□□□ -0.29
BEST1-208ENST00000534553 ATP13A5Q4VNC0 1218 aa13.23□□□□□ -0.29
BEST1-208ENST00000534553 ARSIQ5FYB1 569 aa13.23□□□□□ -0.29
BEST1-208ENST00000534553 PPP2R2DQ66LE6 453 aa13.23□□□□□ -0.29
BEST1-208ENST00000534553 TMEM184AQ6ZMB5 413 aa13.23□□□□□ -0.29
BEST1-208ENST00000534553 DPPA4Q7L190 304 aa13.23□□□□□ -0.29
BEST1-208ENST00000534553 ULK2Q8IYT8 1036 aa13.23□□□□□ -0.29
BEST1-208ENST00000534553 TRAM1L1Q8N609 369 aa13.23□□□□□ -0.29
BEST1-208ENST00000534553 ENDOVQ8N8Q3 282 aaKnown RBP13.23□□□□□ -0.29
BEST1-208ENST00000534553 STMN2Q93045 179 aa13.23□□□□□ -0.29
BEST1-208ENST00000534553 FAM161BQ96MY7 647 aa13.23□□□□□ -0.29
BEST1-208ENST00000534553 LRRC3BQ96PB8 259 aa13.23□□□□□ -0.29
BEST1-208ENST00000534553 BOCQ9BWV1 1114 aa13.23□□□□□ -0.29
BEST1-208ENST00000534553 FAM83DQ9H4H8 585 aa13.23□□□□□ -0.29
BEST1-208ENST00000534553 PRPF19Q9UMS4 504 aaKnown RBP13.23□□□□□ -0.29
BEST1-208ENST00000534553 COPG1Q9Y678 874 aaKnown RBP13.23□□□□□ -0.29
BEST1-208ENST00000534553 DOCK6Q96HP0 2047 aa13.22□□□□□ -0.29
BEST1-208ENST00000534553 EDDM13A0A1B0GTR0 161 aa13.22□□□□□ -0.29
BEST1-208ENST00000534553 IQCF5A8MTL0 148 aa13.22□□□□□ -0.29
BEST1-208ENST00000534553 TRIM16O95361 564 aa13.22□□□□□ -0.29
BEST1-208ENST00000534553 ENO2P09104 434 aaPredicted RBP13.22□□□□□ -0.29
BEST1-208ENST00000534553 UROSP10746 265 aa13.22□□□□□ -0.29
BEST1-208ENST00000534553 VIPR2P41587 438 aa13.22□□□□□ -0.29
BEST1-208ENST00000534553 ACADVLP49748 655 aa13.22□□□□□ -0.29
BEST1-208ENST00000534553 CDH13P55290 713 aa13.22□□□□□ -0.29
BEST1-208ENST00000534553 STX5Q13190 355 aa13.22□□□□□ -0.29
BEST1-208ENST00000534553 CUL3Q13618 768 aa13.22□□□□□ -0.29
BEST1-208ENST00000534553 UGT3A2Q3SY77 523 aa13.22□□□□□ -0.29
BEST1-208ENST00000534553 SBSNQ6UWP8 590 aa13.22□□□□□ -0.29
BEST1-208ENST00000534553 LARP4Q71RC2 724 aaKnown RBP eCLIP13.22□□□□□ -0.29
BEST1-208ENST00000534553 NRSN1Q8IZ57 195 aa13.22□□□□□ -0.29
BEST1-208ENST00000534553 CPA6Q8N4T0 437 aa13.22□□□□□ -0.29
BEST1-208ENST00000534553 POU5F2Q8N7G0 328 aa13.22□□□□□ -0.29
BEST1-208ENST00000534553 C12orf76Q8N812 135 aaPredicted RBP13.22□□□□□ -0.29
BEST1-208ENST00000534553 TMIEQ8NEW7 156 aa13.22□□□□□ -0.29
BEST1-208ENST00000534553 TRPC4APQ8TEL6 797 aa13.22□□□□□ -0.29
BEST1-208ENST00000534553 UCMAQ8WVF2 138 aa13.22□□□□□ -0.29
BEST1-208ENST00000534553 TWIST2Q8WVJ9 160 aa13.22□□□□□ -0.29
BEST1-208ENST00000534553 DCUN1D1Q96GG9 259 aa13.22□□□□□ -0.29
BEST1-208ENST00000534553 PPP1R36Q96LQ0 422 aa13.22□□□□□ -0.29
BEST1-208ENST00000534553 CATSPER2Q96P56 530 aa13.22□□□□□ -0.29
BEST1-208ENST00000534553 ZNF382Q96SR6 550 aa13.22□□□□□ -0.29
BEST1-208ENST00000534553 SERPINI1Q99574 410 aa13.22□□□□□ -0.29
BEST1-208ENST00000534553 FAM83CQ9BQN1 747 aa13.22□□□□□ -0.29
BEST1-208ENST00000534553 HGH1Q9BTY7 390 aa13.22□□□□□ -0.29
BEST1-208ENST00000534553 THTPAQ9BU02 230 aa13.22□□□□□ -0.29
BEST1-208ENST00000534553 FIS1Q9Y3D6 152 aa13.22□□□□□ -0.29
BEST1-208ENST00000534553 DNAJC15Q9Y5T4 150 aa13.22□□□□□ -0.29
BEST1-208ENST00000534553 LAMA2P24043 3122 aaKnown RBP13.21□□□□□ -0.29
BEST1-208ENST00000534553 LOC100653049A0A140TA62 436 aa13.21□□□□□ -0.29
BEST1-208ENST00000534553 HEPACAM2A8MVW5 462 aa13.21□□□□□ -0.29
BEST1-208ENST00000534553 A8MX80 341 aa13.21□□□□□ -0.29
BEST1-208ENST00000534553 FFAR2O15552 330 aa13.21□□□□□ -0.29
BEST1-208ENST00000534553 CCNT2O60583 730 aaKnown RBP13.21□□□□□ -0.29
BEST1-208ENST00000534553 KRT34O76011 436 aa13.21□□□□□ -0.29
BEST1-208ENST00000534553 VCLP18206 1134 aa13.21□□□□□ -0.29
BEST1-208ENST00000534553 EIF2DP41214 584 aaKnown RBP13.21□□□□□ -0.29
BEST1-208ENST00000534553 MAGEA10P43363 369 aaPredicted RBP13.21□□□□□ -0.29
BEST1-208ENST00000534553 ELP6Q0PNE2 266 aa13.21□□□□□ -0.29
BEST1-208ENST00000534553 ELAVL3Q14576 367 aaKnown RBP13.21□□□□□ -0.29
BEST1-208ENST00000534553 PPP1R3AQ16821 1122 aa13.21□□□□□ -0.29
BEST1-208ENST00000534553 ZNF284Q2VY69 593 aa13.21□□□□□ -0.29
BEST1-208ENST00000534553 SULT1C3Q6IMI6 304 aa13.21□□□□□ -0.29
BEST1-208ENST00000534553 CLDN19Q8N6F1 224 aa13.21□□□□□ -0.29
BEST1-208ENST00000534553 KYQ8NBH2 561 aa13.21□□□□□ -0.29
BEST1-208ENST00000534553 OR8D1Q8WZ84 308 aa13.21□□□□□ -0.29
BEST1-208ENST00000534553 RSPRY1Q96DX4 576 aa13.21□□□□□ -0.29
BEST1-208ENST00000534553 PPP1R16AQ96I34 528 aa13.21□□□□□ -0.29
BEST1-208ENST00000534553 VPS35Q96QK1 796 aa13.21□□□□□ -0.29
BEST1-208ENST00000534553 SPATA16Q9BXB7 569 aa13.21□□□□□ -0.29
BEST1-208ENST00000534553 PBX4Q9BYU1 374 aa13.21□□□□□ -0.29
BEST1-208ENST00000534553 EFCAB1Q9HAE3 211 aa13.21□□□□□ -0.29
BEST1-208ENST00000534553 ZFP14Q9HCL3 533 aa13.21□□□□□ -0.29
BEST1-208ENST00000534553 PCDH12Q9NPG4 1184 aa13.21□□□□□ -0.29
BEST1-208ENST00000534553 NOP53Q9NZM5 478 aaKnown RBP13.21□□□□□ -0.29
BEST1-208ENST00000534553 IKZF3Q9UKT9 509 aa13.21□□□□□ -0.29
BEST1-208ENST00000534553 PRSS21Q9Y6M0 314 aa13.21□□□□□ -0.29
BEST1-208ENST00000534553 C16orf96A6NNT2 1141 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 E2F3O00716 465 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 TRIM24O15164 1050 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 PEX11AO75192 247 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 ATP1B2P14415 290 aaPredicted RBP13.2□□□□□ -0.3
BEST1-208ENST00000534553 TIMP2P16035 220 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 MMP12P39900 470 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 MAPK9P45984 424 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 PIK3CGP48736 1102 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 HK3P52790 923 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 FCHO2Q0JRZ9 810 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 HNRNPA1L2Q32P51 320 aaKnown RBP13.2□□□□□ -0.3
BEST1-208ENST00000534553 TCEAL5Q5H9L2 206 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 LDLRAP1Q5SW96 308 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 PLEKHS1Q5SXH7 462 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 TRIM68Q6AZZ1 485 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 CLEC6AQ6EIG7 209 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 GPRIN3Q6ZVF9 776 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 NUDT18Q6ZVK8 323 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 GET4Q7L5D6 327 aaPredicted RBP13.2□□□□□ -0.3
BEST1-208ENST00000534553 DSG4Q86SJ6 1040 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 SNX32Q86XE0 403 aa13.2□□□□□ -0.3
BEST1-208ENST00000534553 DDHD1Q8NEL9 900 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms