RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 EML2O95834 649 aa11.8□□□□□ -0.52
SSBP3-214ENST00000533209 RALBP11234 206 aa11.8□□□□□ -0.52
SSBP3-214ENST00000533209 ATP1B2P14415 290 aaPredicted RBP11.8□□□□□ -0.52
SSBP3-214ENST00000533209 ARCN1P48444 511 aaKnown RBP11.8□□□□□ -0.52
SSBP3-214ENST00000533209 RPIAP49247 311 aa11.8□□□□□ -0.52
SSBP3-214ENST00000533209 PRLHRP49683 370 aa11.8□□□□□ -0.52
SSBP3-214ENST00000533209 HLTFQ14527 1009 aaKnown RBP eCLIP11.8□□□□□ -0.52
SSBP3-214ENST00000533209 INSCQ1MX18 579 aa11.8□□□□□ -0.52
SSBP3-214ENST00000533209 ANKRD20A4Q4UJ75 823 aa11.8□□□□□ -0.52
SSBP3-214ENST00000533209 FASTKD1Q53R41 847 aaKnown RBP11.8□□□□□ -0.52
SSBP3-214ENST00000533209 KIAA0930Q6ICG6 404 aaPredicted RBP11.8□□□□□ -0.52
SSBP3-214ENST00000533209 ERMP1Q7Z2K6 904 aa11.8□□□□□ -0.52
SSBP3-214ENST00000533209 TMEM135Q86UB9 458 aa11.8□□□□□ -0.52
SSBP3-214ENST00000533209 BEND7Q8N7W2 519 aaPredicted RBP11.8□□□□□ -0.52
SSBP3-214ENST00000533209 PATE1Q8WXA2 126 aa11.8□□□□□ -0.52
SSBP3-214ENST00000533209 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.8□□□□□ -0.52
SSBP3-214ENST00000533209 FCRL3Q96P31 734 aaPredicted RBP11.8□□□□□ -0.52
SSBP3-214ENST00000533209 DPH5Q9H2P9 285 aa11.8□□□□□ -0.52
SSBP3-214ENST00000533209 GRHL1Q9NZI5 618 aa11.8□□□□□ -0.52
SSBP3-214ENST00000533209 DNAJC16Q9Y2G8 782 aa11.8□□□□□ -0.52
SSBP3-214ENST00000533209 MAD1L1Q9Y6D9 718 aa11.8□□□□□ -0.52
SSBP3-214ENST00000533209 PRSS21Q9Y6M0 314 aa11.8□□□□□ -0.52
SSBP3-214ENST00000533209 GOLGA4Q13439 2230 aaKnown RBP11.8□□□□□ -0.52
SSBP3-214ENST00000533209 PLXNB3Q9ULL4 1909 aa11.8□□□□□ -0.52
SSBP3-214ENST00000533209 NDC80O14777 642 aa11.79□□□□□ -0.52
SSBP3-214ENST00000533209 CD3EAPO15446 510 aaKnown RBP11.79□□□□□ -0.52
SSBP3-214ENST00000533209 OR1I1O60431 355 aa11.79□□□□□ -0.52
SSBP3-214ENST00000533209 USP1O94782 785 aa11.79□□□□□ -0.52
SSBP3-214ENST00000533209 GP1BAP07359 652 aa11.79□□□□□ -0.52
SSBP3-214ENST00000533209 MAZP56270 477 aaKnown RBP11.79□□□□□ -0.52
SSBP3-214ENST00000533209 DHX9Q08211 1270 aaKnown RBP11.79□□□□□ -0.52
SSBP3-214ENST00000533209 DMPKQ09013 629 aa11.79□□□□□ -0.52
SSBP3-214ENST00000533209 ILKQ13418 452 aa11.79□□□□□ -0.52
SSBP3-214ENST00000533209 ITIH4Q14624 930 aa11.79□□□□□ -0.52
SSBP3-214ENST00000533209 BBS9Q3SYG4 887 aa11.79□□□□□ -0.52
SSBP3-214ENST00000533209 C14orf28Q4W4Y0 310 aa11.79□□□□□ -0.52
SSBP3-214ENST00000533209 CCDC157Q569K6 752 aa11.79□□□□□ -0.52
SSBP3-214ENST00000533209 DNAJC21Q5F1R6 531 aaKnown RBP11.79□□□□□ -0.52
SSBP3-214ENST00000533209 PERM1Q5SV97 790 aa11.79□□□□□ -0.52
SSBP3-214ENST00000533209 LYPLAL1Q5VWZ2 237 aa11.79□□□□□ -0.52
SSBP3-214ENST00000533209 XKR5Q6UX68 686 aa11.79□□□□□ -0.52
SSBP3-214ENST00000533209 PACS1Q6VY07 963 aa11.79□□□□□ -0.52
SSBP3-214ENST00000533209 CERS6Q6ZMG9 384 aa11.79□□□□□ -0.52
SSBP3-214ENST00000533209 EFL1Q7Z2Z2 1120 aaKnown RBP11.79□□□□□ -0.52
SSBP3-214ENST00000533209 LDB1Q86U70 411 aaPredicted RBP11.79□□□□□ -0.52
SSBP3-214ENST00000533209 AMZ2Q86W34 360 aa11.79□□□□□ -0.52
SSBP3-214ENST00000533209 IGDCC3Q8IVU1 814 aa11.79□□□□□ -0.52
SSBP3-214ENST00000533209 PDIK1LQ8N165 341 aa11.79□□□□□ -0.52
SSBP3-214ENST00000533209 MMGT1Q8N4V1 131 aa11.79□□□□□ -0.52
SSBP3-214ENST00000533209 CLDN19Q8N6F1 224 aa11.79□□□□□ -0.52
SSBP3-214ENST00000533209 BBOF1Q8ND07 529 aa11.79□□□□□ -0.52
SSBP3-214ENST00000533209 MNS1Q8NEH6 495 aa11.79□□□□□ -0.52
SSBP3-214ENST00000533209 IFI44Q8TCB0 444 aa11.79□□□□□ -0.52
SSBP3-214ENST00000533209 ADAMTS14Q8WXS8 1223 aa11.79□□□□□ -0.52
SSBP3-214ENST00000533209 ZNF669Q96BR6 464 aaPredicted RBP11.79□□□□□ -0.52
SSBP3-214ENST00000533209 STAMBPL1Q96FJ0 436 aa11.79□□□□□ -0.52
SSBP3-214ENST00000533209 LINC00615Q96LM1 132 aaPredicted RBP11.79□□□□□ -0.52
SSBP3-214ENST00000533209 EBNA1BP2Q99848 306 aaKnown RBP11.79□□□□□ -0.52
SSBP3-214ENST00000533209 WDR83Q9BRX9 315 aaKnown RBP11.79□□□□□ -0.52
SSBP3-214ENST00000533209 LRRC1Q9BTT6 524 aa11.79□□□□□ -0.52
SSBP3-214ENST00000533209 OSGEPL1Q9H4B0 414 aa11.79□□□□□ -0.52
SSBP3-214ENST00000533209 PRDM8Q9NQV8 689 aa11.79□□□□□ -0.52
SSBP3-214ENST00000533209 CATSPERZQ9NTU4 200 aa11.79□□□□□ -0.52
SSBP3-214ENST00000533209 EVA1BQ9NVM1 165 aa11.79□□□□□ -0.52
SSBP3-214ENST00000533209 WHRNQ9P202 907 aa11.79□□□□□ -0.52
SSBP3-214ENST00000533209 UTP11Q9Y3A2 253 aaKnown RBP11.79□□□□□ -0.52
SSBP3-214ENST00000533209 RPS6KL1Q9Y6S9 549 aa11.79□□□□□ -0.52
SSBP3-214ENST00000533209 SPEGQ15772 3267 aa11.78□□□□□ -0.52
SSBP3-214ENST00000533209 MED19A0JLT2 244 aaPredicted RBP11.78□□□□□ -0.52
SSBP3-214ENST00000533209 CTAGE15A4D2H0 777 aa11.78□□□□□ -0.52
SSBP3-214ENST00000533209 MGAT4DA6NG13 374 aa11.78□□□□□ -0.52
SSBP3-214ENST00000533209 SNX2O60749 519 aa11.78□□□□□ -0.52
SSBP3-214ENST00000533209 KCNJ13O60928 360 aa11.78□□□□□ -0.52
SSBP3-214ENST00000533209 AP2A2O94973 939 aa11.78□□□□□ -0.52
SSBP3-214ENST00000533209 CTAGE8P0CG41 777 aa11.78□□□□□ -0.52
SSBP3-214ENST00000533209 F3P13726 295 aa11.78□□□□□ -0.52
SSBP3-214ENST00000533209 VCLP18206 1134 aa11.78□□□□□ -0.52
SSBP3-214ENST00000533209 PGAM1P18669 254 aa11.78□□□□□ -0.52
SSBP3-214ENST00000533209 PAMP19021 973 aa11.78□□□□□ -0.52
SSBP3-214ENST00000533209 PBLDP30039 288 aaPredicted RBP11.78□□□□□ -0.52
SSBP3-214ENST00000533209 NSG1P42857 185 aa11.78□□□□□ -0.52
SSBP3-214ENST00000533209 ARL4CP56559 192 aa11.78□□□□□ -0.52
SSBP3-214ENST00000533209 SLC7A5Q01650 507 aa11.78□□□□□ -0.52
SSBP3-214ENST00000533209 CBLBQ13191 982 aa11.78□□□□□ -0.52
SSBP3-214ENST00000533209 NFE2L1Q14494 772 aa11.78□□□□□ -0.52
SSBP3-214ENST00000533209 TRADDQ15628 312 aa11.78□□□□□ -0.52
SSBP3-214ENST00000533209 SMAD1Q15797 465 aaKnown RBP11.78□□□□□ -0.52
SSBP3-214ENST00000533209 HIF1AQ16665 826 aa11.78□□□□□ -0.52
SSBP3-214ENST00000533209 ZNF658BQ4V348 819 aaPredicted RBP11.78□□□□□ -0.52
SSBP3-214ENST00000533209 AARS2Q5JTZ9 985 aaKnown RBP11.78□□□□□ -0.52
SSBP3-214ENST00000533209 C8orf74Q6P047 294 aa11.78□□□□□ -0.52
SSBP3-214ENST00000533209 IYDQ6PHW0 289 aa11.78□□□□□ -0.52
SSBP3-214ENST00000533209 DHRS13Q6UX07 377 aa11.78□□□□□ -0.52
SSBP3-214ENST00000533209 WASH2PQ6VEQ5 465 aa11.78□□□□□ -0.52
SSBP3-214ENST00000533209 FAM83HQ6ZRV2 1179 aaPredicted RBP11.78□□□□□ -0.52
SSBP3-214ENST00000533209 RAB44Q7Z6P3 723 aaPredicted RBP11.78□□□□□ -0.52
SSBP3-214ENST00000533209 CTAGE6Q86UF2 777 aa11.78□□□□□ -0.52
SSBP3-214ENST00000533209 CTAGE4Q8IX94 777 aa11.78□□□□□ -0.52
SSBP3-214ENST00000533209 SFRP1Q8N474 314 aa11.78□□□□□ -0.52
SSBP3-214ENST00000533209 ARL14Q8N4G2 192 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms