RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 PRORYQ9H606 182 aa29.81■■■□□ 2.36
SSSCA1-207ENST00000533115 LRRC40Q9H9A6 602 aa29.81■■■□□ 2.36
SSSCA1-207ENST00000533115 PDZK1P1A8MUH7 402 aa29.8■■■□□ 2.36
SSSCA1-207ENST00000533115 KLK10O43240 276 aa29.8■■■□□ 2.36
SSSCA1-207ENST00000533115 LIASO43766 372 aa29.8■■■□□ 2.36
SSSCA1-207ENST00000533115 KCNJ13O60928 360 aa29.8■■■□□ 2.36
SSSCA1-207ENST00000533115 SRP72O76094 671 aaKnown RBP29.8■■■□□ 2.36
SSSCA1-207ENST00000533115 IDSP22304 550 aa29.8■■■□□ 2.36
SSSCA1-207ENST00000533115 STIP1P31948 543 aaKnown RBP29.8■■■□□ 2.36
SSSCA1-207ENST00000533115 CTSCP53634 463 aa29.8■■■□□ 2.36
SSSCA1-207ENST00000533115 EPHA4P54764 986 aa29.8■■■□□ 2.36
SSSCA1-207ENST00000533115 SEPT7Q16181 437 aaKnown RBP29.8■■■□□ 2.36
SSSCA1-207ENST00000533115 BROXQ5VW32 411 aa29.8■■■□□ 2.36
SSSCA1-207ENST00000533115 OR13C4Q8NGS5 318 aa29.8■■■□□ 2.36
SSSCA1-207ENST00000533115 C19orf43Q9BQ61 176 aa29.8■■■□□ 2.36
SSSCA1-207ENST00000533115 ASB8Q9H765 288 aa29.8■■■□□ 2.36
SSSCA1-207ENST00000533115 TMEM9Q9P0T7 183 aa29.8■■■□□ 2.36
SSSCA1-207ENST00000533115 PSMD3O43242 534 aa29.79■■■□□ 2.36
SSSCA1-207ENST00000533115 THRAP10827 490 aa29.79■■■□□ 2.36
SSSCA1-207ENST00000533115 MPSTP25325 297 aa29.79■■■□□ 2.36
SSSCA1-207ENST00000533115 ETV5P41161 510 aa29.79■■■□□ 2.36
SSSCA1-207ENST00000533115 ZNF140P52738 457 aaPredicted RBP29.79■■■□□ 2.36
SSSCA1-207ENST00000533115 CCZ1BP86790 482 aa29.79■■■□□ 2.36
SSSCA1-207ENST00000533115 CCZ1P86791 482 aaPredicted RBP29.79■■■□□ 2.36
SSSCA1-207ENST00000533115 XIAPP98170 497 aa29.79■■■□□ 2.36
SSSCA1-207ENST00000533115 OASLQ15646 514 aaKnown RBP29.79■■■□□ 2.36
SSSCA1-207ENST00000533115 TMEM220Q6QAJ8 160 aa29.79■■■□□ 2.36
SSSCA1-207ENST00000533115 ABRAXAS1Q6UWZ7 409 aa29.79■■■□□ 2.36
SSSCA1-207ENST00000533115 WASH2PQ6VEQ5 465 aa29.79■■■□□ 2.36
SSSCA1-207ENST00000533115 WASH6PQ9NQA3 447 aa29.79■■■□□ 2.36
SSSCA1-207ENST00000533115 DNMT3AQ9Y6K1 912 aaPredicted RBP29.79■■■□□ 2.36
SSSCA1-207ENST00000533115 NVLO15381 856 aaKnown RBP29.78■■■□□ 2.36
SSSCA1-207ENST00000533115 POP7O75817 140 aaKnown RBP29.78■■■□□ 2.36
SSSCA1-207ENST00000533115 AP2A1O95782 977 aa29.78■■■□□ 2.36
SSSCA1-207ENST00000533115 BRAFP15056 766 aa29.78■■■□□ 2.36
SSSCA1-207ENST00000533115 MSH3P20585 1137 aa29.78■■■□□ 2.36
SSSCA1-207ENST00000533115 RPL10P27635 214 aaKnown RBP29.78■■■□□ 2.36
SSSCA1-207ENST00000533115 AKT1P31749 480 aa29.78■■■□□ 2.36
SSSCA1-207ENST00000533115 HADHAP40939 763 aa29.78■■■□□ 2.36
SSSCA1-207ENST00000533115 MAPK10P53779 464 aa29.78■■■□□ 2.36
SSSCA1-207ENST00000533115 AGAP9Q5VTM2 703 aa29.78■■■□□ 2.36
SSSCA1-207ENST00000533115 WDR74Q6RFH5 385 aaPredicted RBP29.78■■■□□ 2.36
SSSCA1-207ENST00000533115 AMZ2Q86W34 360 aa29.78■■■□□ 2.36
SSSCA1-207ENST00000533115 TRIM48Q8IWZ4 208 aa29.78■■■□□ 2.36
SSSCA1-207ENST00000533115 UCK1Q9HA47 277 aa29.78■■■□□ 2.36
SSSCA1-207ENST00000533115 ZNF624Q9P2J8 865 aaPredicted RBP29.78■■■□□ 2.36
SSSCA1-207ENST00000533115 PDP2Q9P2J9 529 aa29.78■■■□□ 2.36
SSSCA1-207ENST00000533115 ACSL6Q9UKU0 697 aa29.78■■■□□ 2.36
SSSCA1-207ENST00000533115 LILRA5A6NI73 299 aa29.77■■■□□ 2.36
SSSCA1-207ENST00000533115 OR2AG2A6NM03 316 aa29.77■■■□□ 2.36
SSSCA1-207ENST00000533115 LDB2O43679 373 aa29.77■■■□□ 2.36
SSSCA1-207ENST00000533115 VIPP01282 170 aa29.77■■■□□ 2.36
SSSCA1-207ENST00000533115 SLC19A1P41440 591 aa29.77■■■□□ 2.36
SSSCA1-207ENST00000533115 DRG2P55039 364 aaKnown RBP29.77■■■□□ 2.36
SSSCA1-207ENST00000533115 UCNP55089 124 aa29.77■■■□□ 2.36
SSSCA1-207ENST00000533115 TMPRSS15P98073 1019 aa29.77■■■□□ 2.36
SSSCA1-207ENST00000533115 DMPKQ09013 629 aa29.77■■■□□ 2.36
SSSCA1-207ENST00000533115 TAB3Q8N5C8 712 aaPredicted RBP29.77■■■□□ 2.36
SSSCA1-207ENST00000533115 C1orf54Q8WWF1 131 aa29.77■■■□□ 2.36
SSSCA1-207ENST00000533115 USP7Q93009 1102 aa29.77■■■□□ 2.36
SSSCA1-207ENST00000533115 ZNF514Q96K75 400 aaPredicted RBP29.77■■■□□ 2.36
SSSCA1-207ENST00000533115 FCRL3Q96P31 734 aaPredicted RBP29.77■■■□□ 2.36
SSSCA1-207ENST00000533115 TBC1D10AQ9BXI6 508 aa29.77■■■□□ 2.36
SSSCA1-207ENST00000533115 EPB41L1Q9H4G0 881 aa29.77■■■□□ 2.36
SSSCA1-207ENST00000533115 IGSF10Q6WRI0 2623 aa29.76■■■□□ 2.36
SSSCA1-207ENST00000533115 NRDCO43847 1150 aa29.76■■■□□ 2.35
SSSCA1-207ENST00000533115 CCL4P13236 92 aa29.76■■■□□ 2.35
SSSCA1-207ENST00000533115 TPH1P17752 444 aa29.76■■■□□ 2.35
SSSCA1-207ENST00000533115 MAPK9P45984 424 aa29.76■■■□□ 2.35
SSSCA1-207ENST00000533115 LONRF2Q1L5Z9 754 aa29.76■■■□□ 2.35
SSSCA1-207ENST00000533115 AGBL5Q8NDL9 886 aa29.76■■■□□ 2.35
SSSCA1-207ENST00000533115 NCSTNQ92542 709 aa29.76■■■□□ 2.35
SSSCA1-207ENST00000533115 EIF2AK3Q9NZJ5 1116 aaKnown RBP29.76■■■□□ 2.35
SSSCA1-207ENST00000533115 ZNF148Q9UQR1 794 aa29.76■■■□□ 2.35
SSSCA1-207ENST00000533115 SSUH2Q9Y2M2 353 aa29.76■■■□□ 2.35
SSSCA1-207ENST00000533115 PRAMEF33A0A0G2JMD5 474 aa29.75■■■□□ 2.35
SSSCA1-207ENST00000533115 AGAP14A8MT82 685 aa29.75■■■□□ 2.35
SSSCA1-207ENST00000533115 PRAMEF10O60809 474 aa29.75■■■□□ 2.35
SSSCA1-207ENST00000533115 TMPRSS3P57727 454 aa29.75■■■□□ 2.35
SSSCA1-207ENST00000533115 CXADRP78310 365 aa29.75■■■□□ 2.35
SSSCA1-207ENST00000533115 CLN3Q13286 438 aa29.75■■■□□ 2.35
SSSCA1-207ENST00000533115 TMEM26Q6ZUK4 368 aa29.75■■■□□ 2.35
SSSCA1-207ENST00000533115 ULK4Q96C45 1275 aa29.75■■■□□ 2.35
SSSCA1-207ENST00000533115 B3GNT4Q9C0J1 378 aa29.75■■■□□ 2.35
SSSCA1-207ENST00000533115 POT1Q9NUX5 634 aa29.75■■■□□ 2.35
SSSCA1-207ENST00000533115 CRLS1Q9UJA2 301 aa29.75■■■□□ 2.35
SSSCA1-207ENST00000533115 OR52A4PA6NMU1 304 aa29.74■■■□□ 2.35
SSSCA1-207ENST00000533115 IFNB1P01574 187 aa29.74■■■□□ 2.35
SSSCA1-207ENST00000533115 CSTF2P33240 577 aaKnown RBP eCLIP29.74■■■□□ 2.35
SSSCA1-207ENST00000533115 SNX1Q13596 522 aa29.74■■■□□ 2.35
SSSCA1-207ENST00000533115 FNBP1LQ5T0N5 605 aa29.74■■■□□ 2.35
SSSCA1-207ENST00000533115 DET1Q7L5Y6 550 aa29.74■■■□□ 2.35
SSSCA1-207ENST00000533115 SNX20Q7Z614 316 aa29.74■■■□□ 2.35
SSSCA1-207ENST00000533115 LINC00523Q86TU6 105 aa29.74■■■□□ 2.35
SSSCA1-207ENST00000533115 TRIM58Q8NG06 486 aa29.74■■■□□ 2.35
SSSCA1-207ENST00000533115 SGF29Q96ES7 293 aa29.74■■■□□ 2.35
SSSCA1-207ENST00000533115 DNAJC1Q96KC8 554 aaKnown RBP29.74■■■□□ 2.35
SSSCA1-207ENST00000533115 WDR37Q9Y2I8 494 aa29.74■■■□□ 2.35
SSSCA1-207ENST00000533115 CACNA1GO43497 2377 aa29.73■■■□□ 2.35
SSSCA1-207ENST00000533115 ERI2A8K979 691 aaKnown RBP29.73■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms