RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 DTX3LQ8TDB6 740 aa18.65■□□□□ 0.58
SSH3-209ENST00000532600 BLOC1S5Q8TDH9 187 aa18.65■□□□□ 0.58
SSH3-209ENST00000532600 ART4Q93070 314 aa18.65■□□□□ 0.58
SSH3-209ENST00000532600 WBP1Q96G27 269 aa18.65■□□□□ 0.58
SSH3-209ENST00000532600 TAAR9Q96RI9 348 aa18.65■□□□□ 0.58
SSH3-209ENST00000532600 TIMM29Q9BSF4 260 aa18.65■□□□□ 0.58
SSH3-209ENST00000532600 GBA3Q9H227 469 aa18.65■□□□□ 0.58
SSH3-209ENST00000532600 OSGEPL1Q9H4B0 414 aa18.65■□□□□ 0.58
SSH3-209ENST00000532600 TRABDQ9H4I3 376 aa18.65■□□□□ 0.58
SSH3-209ENST00000532600 UGT1A7Q9HAW7 530 aa18.65■□□□□ 0.58
SSH3-209ENST00000532600 UGT1A10Q9HAW8 530 aa18.65■□□□□ 0.58
SSH3-209ENST00000532600 UGT1A8Q9HAW9 530 aa18.65■□□□□ 0.58
SSH3-209ENST00000532600 TRHDEQ9UKU6 1024 aa18.65■□□□□ 0.58
SSH3-209ENST00000532600 DNAJC16Q9Y2G8 782 aa18.65■□□□□ 0.58
SSH3-209ENST00000532600 B3GALT1Q9Y5Z6 326 aa18.65■□□□□ 0.58
SSH3-209ENST00000532600 SLC30A1Q9Y6M5 507 aa18.65■□□□□ 0.58
SSH3-209ENST00000532600 ZNF462Q96JM2 2506 aa18.65■□□□□ 0.58
SSH3-209ENST00000532600 GOLGA6L9A6NEM1 432 aa18.64■□□□□ 0.57
SSH3-209ENST00000532600 OR5K4A6NMS3 321 aa18.64■□□□□ 0.57
SSH3-209ENST00000532600 H7C0C1 242 aa18.64■□□□□ 0.57
SSH3-209ENST00000532600 CDK14O94921 469 aa18.64■□□□□ 0.57
SSH3-209ENST00000532600 XRCC1P18887 633 aaPredicted RBP18.64■□□□□ 0.57
SSH3-209ENST00000532600 HLA-DPA1P20036 260 aa18.64■□□□□ 0.57
SSH3-209ENST00000532600 CXCR5P32302 372 aa18.64■□□□□ 0.57
SSH3-209ENST00000532600 ATP5OP48047 213 aa18.64■□□□□ 0.57
SSH3-209ENST00000532600 CTSCP53634 463 aa18.64■□□□□ 0.57
SSH3-209ENST00000532600 EPHA4P54764 986 aa18.64■□□□□ 0.57
SSH3-209ENST00000532600 TMEM115Q12893 351 aaPredicted RBP18.64■□□□□ 0.57
SSH3-209ENST00000532600 INSCQ1MX18 579 aa18.64■□□□□ 0.57
SSH3-209ENST00000532600 SNAP47Q5SQN1 464 aa18.64■□□□□ 0.57
SSH3-209ENST00000532600 FAM151BQ6UXP7 276 aa18.64■□□□□ 0.57
SSH3-209ENST00000532600 UBE2Q2Q8WVN8 375 aa18.64■□□□□ 0.57
SSH3-209ENST00000532600 JPH3Q8WXH2 748 aaPredicted RBP18.64■□□□□ 0.57
SSH3-209ENST00000532600 NCSTNQ92542 709 aa18.64■□□□□ 0.57
SSH3-209ENST00000532600 AHCYL2Q96HN2 611 aaKnown RBP18.64■□□□□ 0.57
SSH3-209ENST00000532600 WDR70Q9NW82 654 aa18.64■□□□□ 0.57
SSH3-209ENST00000532600 AKAP7Q9P0M2 348 aaPredicted RBP18.64■□□□□ 0.57
SSH3-209ENST00000532600 WDR37Q9Y2I8 494 aa18.64■□□□□ 0.57
SSH3-209ENST00000532600 R3HDM2Q9Y2K5 976 aaKnown RBP18.64■□□□□ 0.57
SSH3-209ENST00000532600 JRKLQ9Y4A0 524 aa18.64■□□□□ 0.57
SSH3-209ENST00000532600 LILRA5A6NI73 299 aa18.63■□□□□ 0.57
SSH3-209ENST00000532600 EFCAB7A8K855 629 aa18.63■□□□□ 0.57
SSH3-209ENST00000532600 A8MU76 341 aa18.63■□□□□ 0.57
SSH3-209ENST00000532600 B4E171 279 aa18.63■□□□□ 0.57
SSH3-209ENST00000532600 SLC2A4P14672 509 aa18.63■□□□□ 0.57
SSH3-209ENST00000532600 RPL10P27635 214 aaKnown RBP18.63■□□□□ 0.57
SSH3-209ENST00000532600 CD82P27701 267 aa18.63■□□□□ 0.57
SSH3-209ENST00000532600 CSTF2P33240 577 aaKnown RBP eCLIP18.63■□□□□ 0.57
SSH3-209ENST00000532600 SPAM1P38567 509 aa18.63■□□□□ 0.57
SSH3-209ENST00000532600 TSPAN7P41732 249 aa18.63■□□□□ 0.57
SSH3-209ENST00000532600 MAPK9P45984 424 aa18.63■□□□□ 0.57
SSH3-209ENST00000532600 DRG2P55039 364 aaKnown RBP18.63■□□□□ 0.57
SSH3-209ENST00000532600 SEPT7Q16181 437 aaKnown RBP18.63■□□□□ 0.57
SSH3-209ENST00000532600 TAF1BQ53T94 588 aaPredicted RBP18.63■□□□□ 0.57
SSH3-209ENST00000532600 ABRAXAS1Q6UWZ7 409 aa18.63■□□□□ 0.57
SSH3-209ENST00000532600 RANBP10Q6VN20 620 aa18.63■□□□□ 0.57
SSH3-209ENST00000532600 RASGEF1AQ8N9B8 481 aa18.63■□□□□ 0.57
SSH3-209ENST00000532600 NKD1Q969G9 470 aa18.63■□□□□ 0.57
SSH3-209ENST00000532600 SH3KBP1Q96B97 665 aa18.63■□□□□ 0.57
SSH3-209ENST00000532600 FICDQ9BVA6 458 aa18.63■□□□□ 0.57
SSH3-209ENST00000532600 DDA1Q9BW61 102 aa18.63■□□□□ 0.57
SSH3-209ENST00000532600 SPRY4Q9C004 299 aa18.63■□□□□ 0.57
SSH3-209ENST00000532600 UCK1Q9HA47 277 aa18.63■□□□□ 0.57
SSH3-209ENST00000532600 HACD3Q9P035 362 aa18.63■□□□□ 0.57
SSH3-209ENST00000532600 KCTD3Q9Y597 815 aa18.63■□□□□ 0.57
SSH3-209ENST00000532600 ARL5AQ9Y689 179 aa18.63■□□□□ 0.57
SSH3-209ENST00000532600 OR52A4PA6NMU1 304 aa18.62■□□□□ 0.57
SSH3-209ENST00000532600 RBP3P10745 1247 aa18.62■□□□□ 0.57
SSH3-209ENST00000532600 PSMB4P28070 264 aa18.62■□□□□ 0.57
SSH3-209ENST00000532600 GFERP55789 205 aa18.62■□□□□ 0.57
SSH3-209ENST00000532600 EIF3EP60228 445 aaKnown RBP18.62■□□□□ 0.57
SSH3-209ENST00000532600 C19orf57Q0VDD7 668 aa18.62■□□□□ 0.57
SSH3-209ENST00000532600 CLCA4Q14CN2 919 aa18.62■□□□□ 0.57
SSH3-209ENST00000532600 LINC00303Q3SY05 128 aa18.62■□□□□ 0.57
SSH3-209ENST00000532600 ANKRD20A2Q5SQ80 823 aa18.62■□□□□ 0.57
SSH3-209ENST00000532600 ANKRD20A1Q5TYW2 823 aa18.62■□□□□ 0.57
SSH3-209ENST00000532600 ANKRD20A3Q5VUR7 823 aa18.62■□□□□ 0.57
SSH3-209ENST00000532600 ANKS6Q68DC2 871 aa18.62■□□□□ 0.57
SSH3-209ENST00000532600 XKR5Q6UX68 686 aa18.62■□□□□ 0.57
SSH3-209ENST00000532600 FAM83HQ6ZRV2 1179 aaPredicted RBP18.62■□□□□ 0.57
SSH3-209ENST00000532600 TMEM26Q6ZUK4 368 aa18.62■□□□□ 0.57
SSH3-209ENST00000532600 MICALCLQ6ZW33 695 aa18.62■□□□□ 0.57
SSH3-209ENST00000532600 GLT6D1Q7Z4J2 308 aa18.62■□□□□ 0.57
SSH3-209ENST00000532600 SLC13A5Q86YT5 568 aaPredicted RBP18.62■□□□□ 0.57
SSH3-209ENST00000532600 DDHD1Q8NEL9 900 aa18.62■□□□□ 0.57
SSH3-209ENST00000532600 NAT14Q8WUY8 206 aa18.62■□□□□ 0.57
SSH3-209ENST00000532600 APOL2Q9BQE5 337 aa18.62■□□□□ 0.57
SSH3-209ENST00000532600 SLC39A1Q9NY26 324 aa18.62■□□□□ 0.57
SSH3-209ENST00000532600 PCDHGA4Q9Y5G9 962 aa18.62■□□□□ 0.57
SSH3-209ENST00000532600 MN1Q10571 1320 aaPredicted RBP18.62■□□□□ 0.57
SSH3-209ENST00000532600 GLYATL1P3A0A0U1RQE8 302 aa18.61■□□□□ 0.57
SSH3-209ENST00000532600 STMND1H3BQB6 276 aa18.61■□□□□ 0.57
SSH3-209ENST00000532600 TJP3O95049 919 aa18.61■□□□□ 0.57
SSH3-209ENST00000532600 GEMP55040 296 aa18.61■□□□□ 0.57
SSH3-209ENST00000532600 GNG11P61952 73 aa18.61■□□□□ 0.57
SSH3-209ENST00000532600 SIX1Q15475 284 aaPredicted RBP18.61■□□□□ 0.57
SSH3-209ENST00000532600 MANEAQ5SRI9 462 aa18.61■□□□□ 0.57
SSH3-209ENST00000532600 GPRC6AQ5T6X5 926 aa18.61■□□□□ 0.57
SSH3-209ENST00000532600 TMEM164Q5U3C3 297 aa18.61■□□□□ 0.57
SSH3-209ENST00000532600 AGAP9Q5VTM2 703 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms