RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.27□□□□□ -0.77
PRPF40B-204ENST00000527253 R3HDM2Q9Y2K5 976 aaKnown RBP10.27□□□□□ -0.77
PRPF40B-204ENST00000527253 PCDHGA3Q9Y5H0 932 aa10.27□□□□□ -0.77
PRPF40B-204ENST00000527253 B3GALT1Q9Y5Z6 326 aa10.27□□□□□ -0.77
PRPF40B-204ENST00000527253 KALRNO60229 2985 aa10.27□□□□□ -0.77
PRPF40B-204ENST00000527253 COL6A6A6NMZ7 2263 aa10.27□□□□□ -0.77
PRPF40B-204ENST00000527253 MACROD2A1Z1Q3 448 aa10.26□□□□□ -0.77
PRPF40B-204ENST00000527253 LILRA5A6NI73 299 aa10.26□□□□□ -0.77
PRPF40B-204ENST00000527253 OR5K4A6NMS3 321 aa10.26□□□□□ -0.77
PRPF40B-204ENST00000527253 OR52A4PA6NMU1 304 aa10.26□□□□□ -0.77
PRPF40B-204ENST00000527253 EFCAB7A8K855 629 aa10.26□□□□□ -0.77
PRPF40B-204ENST00000527253 B4E171 279 aa10.26□□□□□ -0.77
PRPF40B-204ENST00000527253 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.26□□□□□ -0.77
PRPF40B-204ENST00000527253 POP7O75817 140 aaKnown RBP10.26□□□□□ -0.77
PRPF40B-204ENST00000527253 ANXA9O76027 345 aa10.26□□□□□ -0.77
PRPF40B-204ENST00000527253 FTCDO95954 541 aa10.26□□□□□ -0.77
PRPF40B-204ENST00000527253 SLC2A4P14672 509 aa10.26□□□□□ -0.77
PRPF40B-204ENST00000527253 TYRP1P17643 537 aa10.26□□□□□ -0.77
PRPF40B-204ENST00000527253 CSTF2P33240 577 aaKnown RBP eCLIP10.26□□□□□ -0.77
PRPF40B-204ENST00000527253 TSPAN7P41732 249 aa10.26□□□□□ -0.77
PRPF40B-204ENST00000527253 EPHA4P54764 986 aa10.26□□□□□ -0.77
PRPF40B-204ENST00000527253 GFERP55789 205 aa10.26□□□□□ -0.77
PRPF40B-204ENST00000527253 XIAPP98170 497 aa10.26□□□□□ -0.77
PRPF40B-204ENST00000527253 LY6DQ14210 128 aa10.26□□□□□ -0.77
PRPF40B-204ENST00000527253 CLCA4Q14CN2 919 aa10.26□□□□□ -0.77
PRPF40B-204ENST00000527253 LINC00303Q3SY05 128 aa10.26□□□□□ -0.77
PRPF40B-204ENST00000527253 GPRC6AQ5T6X5 926 aa10.26□□□□□ -0.77
PRPF40B-204ENST00000527253 AGAP9Q5VTM2 703 aa10.26□□□□□ -0.77
PRPF40B-204ENST00000527253 ANKS6Q68DC2 871 aa10.26□□□□□ -0.77
PRPF40B-204ENST00000527253 ITPRIPL1Q6GPH6 555 aa10.26□□□□□ -0.77
PRPF40B-204ENST00000527253 WASH2PQ6VEQ5 465 aa10.26□□□□□ -0.77
PRPF40B-204ENST00000527253 TMEM26Q6ZUK4 368 aa10.26□□□□□ -0.77
PRPF40B-204ENST00000527253 KIAA1328Q86T90 577 aa10.26□□□□□ -0.77
PRPF40B-204ENST00000527253 KLHDC8BQ8IXV7 354 aa10.26□□□□□ -0.77
PRPF40B-204ENST00000527253 ZNF843Q8N446 348 aa10.26□□□□□ -0.77
PRPF40B-204ENST00000527253 DDHD1Q8NEL9 900 aa10.26□□□□□ -0.77
PRPF40B-204ENST00000527253 GDAP1Q8TB36 358 aa10.26□□□□□ -0.77
PRPF40B-204ENST00000527253 SH3KBP1Q96B97 665 aa10.26□□□□□ -0.77
PRPF40B-204ENST00000527253 SPATA13Q96N96 652 aa10.26□□□□□ -0.77
PRPF40B-204ENST00000527253 CTRCQ99895 268 aa10.26□□□□□ -0.77
PRPF40B-204ENST00000527253 FSD1LQ9BXM9 530 aa10.26□□□□□ -0.77
PRPF40B-204ENST00000527253 SPRY4Q9C004 299 aa10.26□□□□□ -0.77
PRPF40B-204ENST00000527253 UCK1Q9HA47 277 aa10.26□□□□□ -0.77
PRPF40B-204ENST00000527253 WASH6PQ9NQA3 447 aa10.26□□□□□ -0.77
PRPF40B-204ENST00000527253 SLC39A1Q9NY26 324 aa10.26□□□□□ -0.77
PRPF40B-204ENST00000527253 AKAP7Q9P0M2 348 aaPredicted RBP10.26□□□□□ -0.77
PRPF40B-204ENST00000527253 KLHL3Q9UH77 587 aa10.26□□□□□ -0.77
PRPF40B-204ENST00000527253 FKBPLQ9UIM3 349 aa10.26□□□□□ -0.77
PRPF40B-204ENST00000527253 GCN1Q92616 2671 aaKnown RBP10.25□□□□□ -0.77
PRPF40B-204ENST00000527253 C5orf60A6NFR6 353 aa10.25□□□□□ -0.77
PRPF40B-204ENST00000527253 OR2AG2A6NM03 316 aa10.25□□□□□ -0.77
PRPF40B-204ENST00000527253 EIF4E1BA6NMX2 242 aaKnown RBP10.25□□□□□ -0.77
PRPF40B-204ENST00000527253 PDZK1P1A8MUH7 402 aa10.25□□□□□ -0.77
PRPF40B-204ENST00000527253 CCL22O00626 93 aa10.25□□□□□ -0.77
PRPF40B-204ENST00000527253 STX7O15400 261 aaKnown RBP10.25□□□□□ -0.77
PRPF40B-204ENST00000527253 SGTAO43765 313 aa10.25□□□□□ -0.77
PRPF40B-204ENST00000527253 KIF1CO43896 1103 aaKnown RBP10.25□□□□□ -0.77
PRPF40B-204ENST00000527253 TJP3O95049 919 aa10.25□□□□□ -0.77
PRPF40B-204ENST00000527253 IPO7O95373 1038 aaKnown RBP10.25□□□□□ -0.77
PRPF40B-204ENST00000527253 METTL18O95568 372 aa10.25□□□□□ -0.77
PRPF40B-204ENST00000527253 VIPP01282 170 aa10.25□□□□□ -0.77
PRPF40B-204ENST00000527253 LPOP22079 712 aaPredicted RBP10.25□□□□□ -0.77
PRPF40B-204ENST00000527253 IDSP22304 550 aa10.25□□□□□ -0.77
PRPF40B-204ENST00000527253 CD82P27701 267 aa10.25□□□□□ -0.77
PRPF40B-204ENST00000527253 CDC25BP30305 580 aa10.25□□□□□ -0.77
PRPF40B-204ENST00000527253 LEPRP48357 1165 aaKnown RBP10.25□□□□□ -0.77
PRPF40B-204ENST00000527253 GDF10P55107 478 aa10.25□□□□□ -0.77
PRPF40B-204ENST00000527253 MC2RQ01718 297 aa10.25□□□□□ -0.77
PRPF40B-204ENST00000527253 KLF1Q13351 362 aaPredicted RBP10.25□□□□□ -0.77
PRPF40B-204ENST00000527253 TAF1AQ15573 450 aaPredicted RBP10.25□□□□□ -0.77
PRPF40B-204ENST00000527253 ZDHHC20Q5W0Z9 365 aa10.25□□□□□ -0.77
PRPF40B-204ENST00000527253 KCTD11Q693B1 232 aa10.25□□□□□ -0.77
PRPF40B-204ENST00000527253 TMEM220Q6QAJ8 160 aa10.25□□□□□ -0.77
PRPF40B-204ENST00000527253 PEX26Q7Z412 305 aa10.25□□□□□ -0.77
PRPF40B-204ENST00000527253 FAM129CQ86XR2 697 aa10.25□□□□□ -0.77
PRPF40B-204ENST00000527253 TRAPPC5Q8IUR0 188 aa10.25□□□□□ -0.77
PRPF40B-204ENST00000527253 BEND7Q8N7W2 519 aaPredicted RBP10.25□□□□□ -0.77
PRPF40B-204ENST00000527253 OR4K2Q8NGD2 314 aa10.25□□□□□ -0.77
PRPF40B-204ENST00000527253 OR13C4Q8NGS5 318 aa10.25□□□□□ -0.77
PRPF40B-204ENST00000527253 ZNF398Q8TD17 642 aa10.25□□□□□ -0.77
PRPF40B-204ENST00000527253 BRSK1Q8TDC3 778 aa10.25□□□□□ -0.77
PRPF40B-204ENST00000527253 NKD1Q969G9 470 aa10.25□□□□□ -0.77
PRPF40B-204ENST00000527253 SGF29Q96ES7 293 aa10.25□□□□□ -0.77
PRPF40B-204ENST00000527253 WBP1Q96G27 269 aa10.25□□□□□ -0.77
PRPF40B-204ENST00000527253 HES6Q96HZ4 224 aa10.25□□□□□ -0.77
PRPF40B-204ENST00000527253 DDA1Q9BW61 102 aa10.25□□□□□ -0.77
PRPF40B-204ENST00000527253 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.25□□□□□ -0.77
PRPF40B-204ENST00000527253 STN1Q9H668 368 aaKnown RBP10.25□□□□□ -0.77
PRPF40B-204ENST00000527253 APMAPQ9HDC9 416 aa10.25□□□□□ -0.77
PRPF40B-204ENST00000527253 SLC40A1Q9NP59 571 aa10.25□□□□□ -0.77
PRPF40B-204ENST00000527253 SMOXQ9NWM0 555 aa10.25□□□□□ -0.77
PRPF40B-204ENST00000527253 AMFRQ9UKV5 643 aa10.25□□□□□ -0.77
PRPF40B-204ENST00000527253 PKP3Q9Y446 797 aa10.25□□□□□ -0.77
PRPF40B-204ENST00000527253 CAPN6Q9Y6Q1 641 aa10.25□□□□□ -0.77
PRPF40B-204ENST00000527253 ATMQ13315 3056 aa10.25□□□□□ -0.77
PRPF40B-204ENST00000527253 MN1Q10571 1320 aaPredicted RBP10.25□□□□□ -0.77
PRPF40B-204ENST00000527253 AGAP14A8MT82 685 aa10.24□□□□□ -0.77
PRPF40B-204ENST00000527253 LDB2O43679 373 aa10.24□□□□□ -0.77
PRPF40B-204ENST00000527253 PPFIA2O75334 1257 aa10.24□□□□□ -0.77
PRPF40B-204ENST00000527253 SRP72O76094 671 aaKnown RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms