RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 DEC1Q9P2X7 70 aa16.64■□□□□ 0.25
SREK1-212ENST00000522912 DKK3Q9UBP4 350 aa16.64■□□□□ 0.25
SREK1-212ENST00000522912 IGLV3-16A0A075B6K0 115 aa16.63■□□□□ 0.25
SREK1-212ENST00000522912 FGF4P08620 206 aa16.63■□□□□ 0.25
SREK1-212ENST00000522912 HLA-EP13747 358 aa16.63■□□□□ 0.25
SREK1-212ENST00000522912 GM2AP17900 193 aa16.63■□□□□ 0.25
SREK1-212ENST00000522912 PIK3R1P27986 724 aa16.63■□□□□ 0.25
SREK1-212ENST00000522912 COPAP53621 1224 aa16.63■□□□□ 0.25
SREK1-212ENST00000522912 MXRA7P84157 204 aa16.63■□□□□ 0.25
SREK1-212ENST00000522912 RALGDSQ12967 914 aa16.63■□□□□ 0.25
SREK1-212ENST00000522912 SBSNQ6UWP8 590 aa16.63■□□□□ 0.25
SREK1-212ENST00000522912 CLYBLQ8N0X4 340 aa16.63■□□□□ 0.25
SREK1-212ENST00000522912 ZBTB2Q8N680 514 aa16.63■□□□□ 0.25
SREK1-212ENST00000522912 SCAMP4Q969E2 229 aa16.63■□□□□ 0.25
SREK1-212ENST00000522912 ESAMQ96AP7 390 aa16.63■□□□□ 0.25
SREK1-212ENST00000522912 MRPL38Q96DV4 380 aaKnown RBP16.63■□□□□ 0.25
SREK1-212ENST00000522912 LRIG1Q96JA1 1093 aa16.63■□□□□ 0.25
SREK1-212ENST00000522912 COPS8Q99627 209 aa16.63■□□□□ 0.25
SREK1-212ENST00000522912 ZBTB26Q9HCK0 441 aa16.63■□□□□ 0.25
SREK1-212ENST00000522912 UTP6Q9NYH9 597 aaKnown RBP16.63■□□□□ 0.25
SREK1-212ENST00000522912 MBD1Q9UIS9 605 aaPredicted RBP16.63■□□□□ 0.25
SREK1-212ENST00000522912 SARDHQ9UL12 918 aa16.63■□□□□ 0.25
SREK1-212ENST00000522912 ASB1Q9Y576 335 aa16.63■□□□□ 0.25
SREK1-212ENST00000522912 FOXA1P55317 472 aa16.63■□□□□ 0.25
SREK1-212ENST00000522912 SLC25A3Q00325 362 aa16.63■□□□□ 0.25
SREK1-212ENST00000522912 HYAL1Q12794 435 aa16.63■□□□□ 0.25
SREK1-212ENST00000522912 RAB30Q15771 203 aa16.63■□□□□ 0.25
SREK1-212ENST00000522912 PPP1R3AQ16821 1122 aa16.63■□□□□ 0.25
SREK1-212ENST00000522912 TXNDC11Q6PKC3 985 aa16.63■□□□□ 0.25
SREK1-212ENST00000522912 Q6ZVL8 140 aa16.63■□□□□ 0.25
SREK1-212ENST00000522912 KIRREL3Q8IZU9 778 aa16.63■□□□□ 0.25
SREK1-212ENST00000522912 PELI3Q8N2H9 469 aa16.63■□□□□ 0.25
SREK1-212ENST00000522912 AGAP11Q8TF27 550 aa16.63■□□□□ 0.25
SREK1-212ENST00000522912 ZNF483Q8TF39 744 aaPredicted RBP16.63■□□□□ 0.25
SREK1-212ENST00000522912 ULK4Q96C45 1275 aa16.63■□□□□ 0.25
SREK1-212ENST00000522912 SPATA16Q9BXB7 569 aa16.63■□□□□ 0.25
SREK1-212ENST00000522912 MMADHCQ9H3L0 296 aaPredicted RBP16.63■□□□□ 0.25
SREK1-212ENST00000522912 SEMA4BQ9NPR2 832 aaPredicted RBP16.63■□□□□ 0.25
SREK1-212ENST00000522912 LATS2Q9NRM7 1088 aa16.63■□□□□ 0.25
SREK1-212ENST00000522912 SPATS2LQ9NUQ6 558 aaKnown RBP16.63■□□□□ 0.25
SREK1-212ENST00000522912 PCTPQ9UKL6 214 aa16.63■□□□□ 0.25
SREK1-212ENST00000522912 TMCO1Q9UM00 188 aa16.63■□□□□ 0.25
SREK1-212ENST00000522912 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.63■□□□□ 0.25
SREK1-212ENST00000522912 SNX2O60749 519 aa16.62■□□□□ 0.25
SREK1-212ENST00000522912 DGKAP23743 735 aa16.62■□□□□ 0.25
SREK1-212ENST00000522912 ETV3P41162 512 aa16.62■□□□□ 0.25
SREK1-212ENST00000522912 RGS4P49798 205 aa16.62■□□□□ 0.25
SREK1-212ENST00000522912 MNAT1P51948 309 aa16.62■□□□□ 0.25
SREK1-212ENST00000522912 METAP1P53582 386 aa16.62■□□□□ 0.25
SREK1-212ENST00000522912 LCP2Q13094 533 aa16.62■□□□□ 0.25
SREK1-212ENST00000522912 PDGFRLQ15198 375 aa16.62■□□□□ 0.25
SREK1-212ENST00000522912 DNAL1Q4LDG9 190 aa16.62■□□□□ 0.25
SREK1-212ENST00000522912 FNDC3BQ53EP0 1204 aaKnown RBP16.62■□□□□ 0.25
SREK1-212ENST00000522912 TMEM184AQ6ZMB5 413 aa16.62■□□□□ 0.25
SREK1-212ENST00000522912 CHSY3Q70JA7 882 aa16.62■□□□□ 0.25
SREK1-212ENST00000522912 DPPA4Q7L190 304 aa16.62■□□□□ 0.25
SREK1-212ENST00000522912 PARS2Q7L3T8 475 aaKnown RBP16.62■□□□□ 0.25
SREK1-212ENST00000522912 ADAMTSL2Q86TH1 951 aa16.62■□□□□ 0.25
SREK1-212ENST00000522912 HCAR2Q8TDS4 363 aa16.62■□□□□ 0.25
SREK1-212ENST00000522912 C3orf30Q96M34 536 aa16.62■□□□□ 0.25
SREK1-212ENST00000522912 KCNA7Q96RP8 456 aa16.62■□□□□ 0.25
SREK1-212ENST00000522912 PLA2G2FQ9BZM2 168 aa16.62■□□□□ 0.25
SREK1-212ENST00000522912 FAM83DQ9H4H8 585 aa16.62■□□□□ 0.25
SREK1-212ENST00000522912 ZFP14Q9HCL3 533 aa16.62■□□□□ 0.25
SREK1-212ENST00000522912 THG1LQ9NWX6 298 aaKnown RBP16.62■□□□□ 0.25
SREK1-212ENST00000522912 NUDT4Q9NZJ9 180 aa16.62■□□□□ 0.25
SREK1-212ENST00000522912 ADAMTS6Q9UKP5 1117 aa16.62■□□□□ 0.25
SREK1-212ENST00000522912 DNAJC15Q9Y5T4 150 aa16.62■□□□□ 0.25
SREK1-212ENST00000522912 COPG1Q9Y678 874 aaKnown RBP16.62■□□□□ 0.25
SREK1-212ENST00000522912 LRRK1Q38SD2 2015 aa16.62■□□□□ 0.25
SREK1-212ENST00000522912 AZIN1O14977 448 aa16.62■□□□□ 0.25
SREK1-212ENST00000522912 MAGEC1O60732 1142 aa16.62■□□□□ 0.25
SREK1-212ENST00000522912 WFS1O76024 890 aa16.62■□□□□ 0.25
SREK1-212ENST00000522912 WASHC2DQ5SRD0 308 aa16.62■□□□□ 0.25
SREK1-212ENST00000522912 C9orf64Q5T6V5 341 aa16.62■□□□□ 0.25
SREK1-212ENST00000522912 KANK2Q63ZY3 851 aa16.62■□□□□ 0.25
SREK1-212ENST00000522912 ANKRD54Q6NXT1 300 aa16.62■□□□□ 0.25
SREK1-212ENST00000522912 CLPTM1LQ96KA5 538 aa16.62■□□□□ 0.25
SREK1-212ENST00000522912 EIF2B4Q9UI10 523 aaKnown RBP16.62■□□□□ 0.25
SREK1-212ENST00000522912 CDH7Q9ULB5 785 aa16.62■□□□□ 0.25
SREK1-212ENST00000522912 ANTXRLA6NF34 631 aa16.61■□□□□ 0.25
SREK1-212ENST00000522912 SLC22A2O15244 555 aa16.61■□□□□ 0.25
SREK1-212ENST00000522912 XPAP23025 273 aaPredicted RBP16.61■□□□□ 0.25
SREK1-212ENST00000522912 PRDX3P30048 256 aaKnown RBP16.61■□□□□ 0.25
SREK1-212ENST00000522912 MMP12P39900 470 aa16.61■□□□□ 0.25
SREK1-212ENST00000522912 DCDC1P59894 354 aa16.61■□□□□ 0.25
SREK1-212ENST00000522912 C18orf21Q32NC0 220 aaPredicted RBP16.61■□□□□ 0.25
SREK1-212ENST00000522912 MYO1HQ8N1T3 1032 aa16.61■□□□□ 0.25
SREK1-212ENST00000522912 THTPAQ9BU02 230 aa16.61■□□□□ 0.25
SREK1-212ENST00000522912 ZNF225Q9UK10 706 aa16.61■□□□□ 0.25
SREK1-212ENST00000522912 PTGDR2Q9Y5Y4 395 aa16.61■□□□□ 0.25
SREK1-212ENST00000522912 RGSL1A5PLK6 1076 aa16.6■□□□□ 0.25
SREK1-212ENST00000522912 KPNA3O00505 521 aaPredicted RBP16.6■□□□□ 0.25
SREK1-212ENST00000522912 E2F3O00716 465 aa16.6■□□□□ 0.25
SREK1-212ENST00000522912 TM7SF2O76062 418 aa16.6■□□□□ 0.25
SREK1-212ENST00000522912 ADSLP30566 484 aaPredicted RBP16.6■□□□□ 0.25
SREK1-212ENST00000522912 OPRD1P41143 372 aa16.6■□□□□ 0.25
SREK1-212ENST00000522912 RAP1GDS1P52306 607 aa16.6■□□□□ 0.25
SREK1-212ENST00000522912 FCHO2Q0JRZ9 810 aa16.6■□□□□ 0.25
SREK1-212ENST00000522912 GRM2Q14416 872 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms