RNA–Protein interactions for RNA: ENST00000515343.1

AC025539.1-201, humanhuman

TSL 2 BASIC

Gene AC025539.1, Length 4,019 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025539.1-201ENST00000515343 ATXN2Q99700 1313 aaKnown RBP1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 ADAM20O43506 726 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 RGS14O43566 566 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 BUD23O43709 281 aaKnown RBP1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 GFPT2O94808 682 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 QDPRP09417 244 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 GP1BBP13224 206 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 KRTAP5-9P26371 169 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 APOBEC1P41238 236 aaKnown RBP1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 ABATP80404 500 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 MC1RQ01726 317 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 GRIK3Q13003 919 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 EFNB3Q15768 340 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 ZNF284Q2VY69 593 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 PDLIM3Q53GG5 364 aaPredicted RBP1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 TDRD12Q587J7 1177 aaKnown RBP1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 DHRS7BQ6IAN0 325 aaPredicted RBP1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 GSTA5Q7RTV2 222 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 ZNF367Q7RTV3 350 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 TRAPPC11Q7Z392 1133 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 SCML4Q8N228 414 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 TTC39CQ8N584 583 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 ZBTB2Q8N680 514 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 EME1Q96AY2 570 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 TMCO6Q96DC7 493 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 TRIM44Q96DX7 344 aaPredicted RBP1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 NCAPGQ9BPX3 1015 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 MIS18AQ9NYP9 233 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 EPS15L1Q9UBC2 864 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 FBXL17Q9UF56 701 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 FAM96BQ9Y3D0 163 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 CLIC4Q9Y696 253 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 NSD2O96028 1365 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 CCDC7Q96M83 1385 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 OR10H2O60403 315 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 ZC3H11AO75152 810 aaKnown RBP eCLIP1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 VNN2O95498 520 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 PPP1R3DO95685 299 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 SRPRAP08240 638 aaKnown RBP1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 GM2AP17900 193 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 PBX3P40426 434 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 PPP3CCP48454 512 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 GNAQP50148 359 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 ALDH3A2P51648 485 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 GPR143P51810 404 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 ZNF41P51814 821 aaPredicted RBP1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 LRMPQ12912 555 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 GPS2Q13227 327 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 GRAPQ13588 217 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 RBMS2Q15434 407 aaKnown RBP1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 NAB2Q15742 525 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 C2orf68Q2NKX9 166 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 ALDH1L2Q3SY69 923 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 AMZ1Q400G9 498 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 DCST1Q5T197 706 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 GPAT4Q86UL3 456 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 GLCCI1Q86VQ1 547 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 CHD1LQ86WJ1 897 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 FAM217AQ8IXS0 508 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 OR8H2Q8N162 312 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 IL17RCQ8NAC3 791 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 CEP76Q8TAP6 659 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 DENND1AQ8TEH3 1009 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 SMARCE1Q969G3 411 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 HARBI1Q96MB7 349 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 ZNF48Q96MX3 618 aaPredicted RBP1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 GFI1Q99684 422 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 BTBD10Q9BSF8 475 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 ALDH8A1Q9H2A2 487 aaPredicted RBP1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 GAREM1Q9H706 876 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 ERVMER34-1Q9H9K5 563 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 C2orf42Q9NWW7 574 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 C1RLQ9NZP8 487 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 OGFRQ9NZT2 677 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 SUN2Q9UH99 717 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 SPENQ96T58 3664 aaKnown RBP1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 FEZF1A0PJY2 475 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 PRR32B1ATL7 298 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 STMND1H3BQB6 276 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 ATP2A1O14983 1001 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 ASAP2O43150 1006 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 TIPRLO75663 272 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 CHRNB1P11230 501 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 PRCPP42785 496 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 PTH2RP49190 550 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 IFI35P80217 286 aaPredicted RBP1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 TRAF1Q13077 416 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 TNFAIP1Q13829 316 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 Q4G0T1 1027 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 MTX3Q5HYI7 312 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 WDR78Q5VTH9 848 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 SLC22A25Q6T423 547 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 Q6ZSV7 163 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 SLC35F3Q8IY50 421 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 TTC30BQ8N4P2 665 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 ANKZF1Q9H8Y5 726 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 HINT3Q9NQE9 182 aaKnown RBP1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 SMARCAL1Q9NZC9 954 aa1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 RCC2Q9P258 522 aaKnown RBP1.68□□□□□ -2.14
AC025539.1-201ENST00000515343 CNOT8Q9UFF9 292 aaKnown RBP1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms