RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 PCYT1BQ9Y5K3 369 aaPredicted RBP13.38□□□□□ -0.27
CCHCR1-227ENST00000508852 hCG_1818297A0A087WSY0 165 aa13.37□□□□□ -0.27
CCHCR1-227ENST00000508852 GLYATL1P3A0A0U1RQE8 302 aa13.37□□□□□ -0.27
CCHCR1-227ENST00000508852 PRR19A6NJB7 356 aa13.37□□□□□ -0.27
CCHCR1-227ENST00000508852 C2orf81A6NN90 581 aa13.37□□□□□ -0.27
CCHCR1-227ENST00000508852 APOC4-APOC2K7ER74 178 aa13.37□□□□□ -0.27
CCHCR1-227ENST00000508852 APOC2P02655 101 aa13.37□□□□□ -0.27
CCHCR1-227ENST00000508852 MT-ND3P03897 115 aa13.37□□□□□ -0.27
CCHCR1-227ENST00000508852 LIFP15018 202 aa13.37□□□□□ -0.27
CCHCR1-227ENST00000508852 NFKB1P19838 968 aa13.37□□□□□ -0.27
CCHCR1-227ENST00000508852 SLC19A1P41440 591 aa13.37□□□□□ -0.27
CCHCR1-227ENST00000508852 ARSDP51689 593 aa13.37□□□□□ -0.27
CCHCR1-227ENST00000508852 KCNC4Q03721 635 aa13.37□□□□□ -0.27
CCHCR1-227ENST00000508852 NFATC3Q12968 1075 aa13.37□□□□□ -0.27
CCHCR1-227ENST00000508852 PRPSAP1Q14558 356 aa13.37□□□□□ -0.27
CCHCR1-227ENST00000508852 LONRF2Q1L5Z9 754 aa13.37□□□□□ -0.27
CCHCR1-227ENST00000508852 ATP13A5Q4VNC0 1218 aa13.37□□□□□ -0.27
CCHCR1-227ENST00000508852 KDELC1Q6UW63 502 aa13.37□□□□□ -0.27
CCHCR1-227ENST00000508852 ATG14Q6ZNE5 492 aa13.37□□□□□ -0.27
CCHCR1-227ENST00000508852 PRSS42Q7Z5A4 293 aa13.37□□□□□ -0.27
CCHCR1-227ENST00000508852 DAAM2Q86T65 1068 aa13.37□□□□□ -0.27
CCHCR1-227ENST00000508852 ZC3H18Q86VM9 953 aaKnown RBP13.37□□□□□ -0.27
CCHCR1-227ENST00000508852 ZNF567Q8N184 647 aa13.37□□□□□ -0.27
CCHCR1-227ENST00000508852 TXLNBQ8N3L3 684 aa13.37□□□□□ -0.27
CCHCR1-227ENST00000508852 HEXDCQ8WVB3 486 aa13.37□□□□□ -0.27
CCHCR1-227ENST00000508852 ZFPM2Q8WW38 1151 aa13.37□□□□□ -0.27
CCHCR1-227ENST00000508852 TBC1D10AQ9BXI6 508 aa13.37□□□□□ -0.27
CCHCR1-227ENST00000508852 SLC25A18Q9H1K4 315 aa13.37□□□□□ -0.27
CCHCR1-227ENST00000508852 ZNF768Q9H5H4 540 aaKnown RBP13.37□□□□□ -0.27
CCHCR1-227ENST00000508852 SLC40A1Q9NP59 571 aa13.37□□□□□ -0.27
CCHCR1-227ENST00000508852 IL26Q9NPH9 171 aa13.37□□□□□ -0.27
CCHCR1-227ENST00000508852 SMOXQ9NWM0 555 aa13.37□□□□□ -0.27
CCHCR1-227ENST00000508852 UBP1Q9NZI7 540 aa13.37□□□□□ -0.27
CCHCR1-227ENST00000508852 IL17CQ9P0M4 197 aa13.37□□□□□ -0.27
CCHCR1-227ENST00000508852 SLC23A2Q9UGH3 650 aa13.37□□□□□ -0.27
CCHCR1-227ENST00000508852 RSPH14Q9UHP6 348 aa13.37□□□□□ -0.27
CCHCR1-227ENST00000508852 FEZ2Q9UHY8 353 aaPredicted RBP13.37□□□□□ -0.27
CCHCR1-227ENST00000508852 PCDHB3Q9Y5E6 796 aa13.37□□□□□ -0.27
CCHCR1-227ENST00000508852 PCDHA13Q9Y5I0 950 aa13.37□□□□□ -0.27
CCHCR1-227ENST00000508852 ZNF106Q9H2Y7 1883 aaKnown RBP13.36□□□□□ -0.27
CCHCR1-227ENST00000508852 C5orf60A6NFR6 353 aa13.36□□□□□ -0.27
CCHCR1-227ENST00000508852 STX7O15400 261 aaKnown RBP13.36□□□□□ -0.27
CCHCR1-227ENST00000508852 RASSF9O75901 435 aa13.36□□□□□ -0.27
CCHCR1-227ENST00000508852 STK17BO94768 372 aa13.36□□□□□ -0.27
CCHCR1-227ENST00000508852 CTNNA2P26232 953 aa13.36□□□□□ -0.27
CCHCR1-227ENST00000508852 CD68P34810 354 aaPredicted RBP13.36□□□□□ -0.27
CCHCR1-227ENST00000508852 CAPZBP47756 277 aa13.36□□□□□ -0.27
CCHCR1-227ENST00000508852 SRSF6Q13247 344 aaKnown RBP13.36□□□□□ -0.27
CCHCR1-227ENST00000508852 BBS12Q6ZW61 710 aa13.36□□□□□ -0.27
CCHCR1-227ENST00000508852 PRICKLE2Q7Z3G6 844 aa13.36□□□□□ -0.27
CCHCR1-227ENST00000508852 ZNF547Q8IVP9 402 aa13.36□□□□□ -0.27
CCHCR1-227ENST00000508852 CDKL3Q8IVW4 592 aaPredicted RBP13.36□□□□□ -0.27
CCHCR1-227ENST00000508852 CARFQ8N187 725 aa13.36□□□□□ -0.27
CCHCR1-227ENST00000508852 TTC30BQ8N4P2 665 aa13.36□□□□□ -0.27
CCHCR1-227ENST00000508852 RNF214Q8ND24 703 aa13.36□□□□□ -0.27
CCHCR1-227ENST00000508852 DDHD1Q8NEL9 900 aa13.36□□□□□ -0.27
CCHCR1-227ENST00000508852 BLOC1S5Q8TDH9 187 aa13.36□□□□□ -0.27
CCHCR1-227ENST00000508852 JPH3Q8WXH2 748 aaPredicted RBP13.36□□□□□ -0.27
CCHCR1-227ENST00000508852 SEC14L1Q92503 715 aa13.36□□□□□ -0.27
CCHCR1-227ENST00000508852 UBXN4Q92575 508 aa13.36□□□□□ -0.27
CCHCR1-227ENST00000508852 MRGPRX2Q96LB1 330 aa13.36□□□□□ -0.27
CCHCR1-227ENST00000508852 FCRL4Q96PJ5 515 aa13.36□□□□□ -0.27
CCHCR1-227ENST00000508852 CLMPQ9H6B4 373 aa13.36□□□□□ -0.27
CCHCR1-227ENST00000508852 BPIFA1Q9NP55 256 aa13.36□□□□□ -0.27
CCHCR1-227ENST00000508852 ARFGAP3Q9NP61 516 aa13.36□□□□□ -0.27
CCHCR1-227ENST00000508852 ZNF624Q9P2J8 865 aaPredicted RBP13.36□□□□□ -0.27
CCHCR1-227ENST00000508852 SAE1Q9UBE0 346 aaPredicted RBP13.36□□□□□ -0.27
CCHCR1-227ENST00000508852 KLHL3Q9UH77 587 aa13.36□□□□□ -0.27
CCHCR1-227ENST00000508852 KCND3Q9UK17 655 aa13.36□□□□□ -0.27
CCHCR1-227ENST00000508852 ACSL5Q9ULC5 683 aa13.36□□□□□ -0.27
CCHCR1-227ENST00000508852 DNAJC16Q9Y2G8 782 aa13.36□□□□□ -0.27
CCHCR1-227ENST00000508852 HYOU1Q9Y4L1 999 aa13.36□□□□□ -0.27
CCHCR1-227ENST00000508852 SPO11Q9Y5K1 396 aa13.36□□□□□ -0.27
CCHCR1-227ENST00000508852 CCDC66A2RUB6 948 aa13.35□□□□□ -0.27
CCHCR1-227ENST00000508852 H7C0C1 242 aa13.35□□□□□ -0.27
CCHCR1-227ENST00000508852 WISP1O95388 367 aa13.35□□□□□ -0.27
CCHCR1-227ENST00000508852 CRTAMO95727 393 aa13.35□□□□□ -0.27
CCHCR1-227ENST00000508852 DLGAP3O95886 979 aa13.35□□□□□ -0.27
CCHCR1-227ENST00000508852 RECKO95980 971 aa13.35□□□□□ -0.27
CCHCR1-227ENST00000508852 FAM87AP0C7U9 286 aa13.35□□□□□ -0.27
CCHCR1-227ENST00000508852 CCNYL3P0C7X3 344 aa13.35□□□□□ -0.27
CCHCR1-227ENST00000508852 RALBP11234 206 aa13.35□□□□□ -0.27
CCHCR1-227ENST00000508852 PECAM1P16284 738 aaPredicted RBP13.35□□□□□ -0.27
CCHCR1-227ENST00000508852 MSH3P20585 1137 aa13.35□□□□□ -0.27
CCHCR1-227ENST00000508852 LPOP22079 712 aaPredicted RBP13.35□□□□□ -0.27
CCHCR1-227ENST00000508852 PTPN7P35236 360 aa13.35□□□□□ -0.27
CCHCR1-227ENST00000508852 ATP5OP48047 213 aa13.35□□□□□ -0.27
CCHCR1-227ENST00000508852 CSRP3P50461 194 aa13.35□□□□□ -0.27
CCHCR1-227ENST00000508852 FOXM1Q08050 763 aa13.35□□□□□ -0.27
CCHCR1-227ENST00000508852 SEPT6Q14141 434 aa13.35□□□□□ -0.27
CCHCR1-227ENST00000508852 TAF1AQ15573 450 aaPredicted RBP13.35□□□□□ -0.27
CCHCR1-227ENST00000508852 SEPT7Q16181 437 aaKnown RBP13.35□□□□□ -0.27
CCHCR1-227ENST00000508852 PLA2G4EQ3MJ16 856 aa13.35□□□□□ -0.27
CCHCR1-227ENST00000508852 ZNF648Q5T619 568 aaPredicted RBP13.35□□□□□ -0.27
CCHCR1-227ENST00000508852 C11orf96Q7Z7L8 435 aa13.35□□□□□ -0.27
CCHCR1-227ENST00000508852 KMT5CQ86Y97 462 aa13.35□□□□□ -0.27
CCHCR1-227ENST00000508852 TMTC1Q8IUR5 882 aa13.35□□□□□ -0.27
CCHCR1-227ENST00000508852 SLC25A41Q8N5S1 370 aa13.35□□□□□ -0.27
CCHCR1-227ENST00000508852 TC2NQ8N9U0 490 aa13.35□□□□□ -0.27
CCHCR1-227ENST00000508852 IPMKQ8NFU5 416 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms