RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 ATP6V0D1P61421 351 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 RHOAP61586 193 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 KCTD21Q4G0X4 260 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 ERMP1Q7Z2K6 904 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 EFL1Q7Z2Z2 1120 aaKnown RBP10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 ISCA2Q86U28 154 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 TDHQ8IZJ6 230 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 EFHBQ8N7U6 833 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 DCAF4L2Q8NA75 395 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 TNIP2Q8NFZ5 429 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 OR4K2Q8NGD2 314 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 GPR150Q8NGU9 434 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 B4GALNT2Q8NHY0 566 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 HMGCLL1Q8TB92 370 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 SP7Q8TDD2 431 aaPredicted RBP10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 C19orf60Q96EN9 201 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 RMND5BQ96G75 393 aaPredicted RBP10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 SLC45A3Q96JT2 553 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 GPATCH1Q9BRR8 931 aaKnown RBP10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 TMEM79Q9BSE2 394 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 PCDHAC1Q9H158 963 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 CLK4Q9HAZ1 481 aaKnown RBP10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 CYP4F12Q9HCS2 524 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 ABCD2Q9UBJ2 740 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 RSL24D1Q9UHA3 163 aaKnown RBP10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 FNDC3AQ9Y2H6 1198 aaKnown RBP10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 CEPT1Q9Y6K0 416 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 C7orf72A4D263 438 aa10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 NEMP2A6NFY4 417 aa10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 ANKRD66B4E2M5 251 aa10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 TRMUO75648 421 aaKnown RBP10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 MYOGP15173 224 aa10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 CDH2P19022 906 aaPredicted RBP10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 CD70P32970 193 aa10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 ESRRGP62508 458 aa10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 INO80DQ53TQ3 878 aaPredicted RBP10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 MRNIPQ6NTE8 343 aa10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 CMTM8Q8IZV2 173 aa10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 MIER2Q8N344 545 aa10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 OR4L1Q8NH43 312 aa10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 ANKRD49Q8WVL7 239 aa10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 SLCO4A1Q96BD0 722 aa10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 PPWD1Q96BP3 646 aaKnown RBP10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 CDKN2AIPNLQ96HQ2 116 aa10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 BIRC8Q96P09 236 aa10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 C9orf16Q9BUW7 83 aa10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 TFB2MQ9H5Q4 396 aaKnown RBP10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 TLR9Q9NR96 1032 aa10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 DNMT3BQ9UBC3 853 aaKnown RBP10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 FIS1Q9Y3D6 152 aa10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 ARIH1Q9Y4X5 557 aaPredicted RBP10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 A0A087WXM4 84 aa10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 LINC01553A4QN01 128 aa10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 ANGPT2O15123 496 aa10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 HTRA2O43464 458 aaPredicted RBP10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 GPX3P22352 226 aa10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 FDXRP22570 491 aa10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 GKP32189 559 aa10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 TTKP33981 857 aa10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 SUOXP51687 545 aa10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 LMAN2Q12907 356 aa10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 CAMK1Q14012 370 aa10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 NRF1Q16656 503 aa10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 UGT3A2Q3SY77 523 aa10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 UNC50Q53HI1 259 aa10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 C6orf10Q5SRN2 563 aa10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 GPR158Q5T848 1215 aa10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 ZNF549Q6P9A3 640 aa10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 PSRC1Q6PGN9 363 aaPredicted RBP10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 NCEH1Q6PIU2 408 aa10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 TMEM207Q6UWW9 146 aa10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 FAM156AQ8NDB6 213 aa10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 SPPL3Q8TCT6 385 aa10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 ADAMTS16Q8TE57 1224 aa10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 PPP1R14BQ96C90 147 aa10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 PHF21BQ96EK2 531 aa10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 C2orf49Q9BVC5 232 aaPredicted RBP10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 SYTL2Q9HCH5 934 aa10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 CD320Q9NPF0 282 aa10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 CATSPERZQ9NTU4 200 aa10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 NLE1Q9NVX2 485 aaPredicted RBP10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 RNF11Q9Y3C5 154 aa10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 PCDHB9Q9Y5E1 797 aa10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 GMEB1Q9Y692 573 aa10.91□□□□□ -0.66
SH3RF1-203ENST00000508685 AZIN1O14977 448 aa10.9□□□□□ -0.66
SH3RF1-203ENST00000508685 GPR39O43194 453 aa10.9□□□□□ -0.66
SH3RF1-203ENST00000508685 PRAMEF12O95522 483 aa10.9□□□□□ -0.66
SH3RF1-203ENST00000508685 GPIP06744 558 aa10.9□□□□□ -0.66
SH3RF1-203ENST00000508685 UMPSP11172 480 aa10.9□□□□□ -0.66
SH3RF1-203ENST00000508685 IDO1P14902 403 aa10.9□□□□□ -0.66
SH3RF1-203ENST00000508685 EPCAMP16422 314 aa10.9□□□□□ -0.66
SH3RF1-203ENST00000508685 LBPP18428 481 aa10.9□□□□□ -0.66
SH3RF1-203ENST00000508685 OGNP20774 298 aaKnown RBP10.9□□□□□ -0.66
SH3RF1-203ENST00000508685 KCNA5P22460 613 aa10.9□□□□□ -0.66
SH3RF1-203ENST00000508685 FASP25445 335 aa10.9□□□□□ -0.66
SH3RF1-203ENST00000508685 PSMA4P25789 261 aaKnown RBP10.9□□□□□ -0.66
SH3RF1-203ENST00000508685 CDKN1CP49918 316 aaPredicted RBP10.9□□□□□ -0.66
SH3RF1-203ENST00000508685 SLC7A2P52569 658 aa10.9□□□□□ -0.66
SH3RF1-203ENST00000508685 STC1P52823 247 aa10.9□□□□□ -0.66
SH3RF1-203ENST00000508685 ATXN3P54252 364 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms