RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 Q75L30 129 aa3.9□□□□□ -1.79
TOPBP1-204ENST00000505804 ZNF771Q7L3S4 317 aaPredicted RBP3.9□□□□□ -1.79
TOPBP1-204ENST00000505804 KBTBD6Q86V97 674 aa3.9□□□□□ -1.79
TOPBP1-204ENST00000505804 EXOC3L1Q86VI1 746 aa3.9□□□□□ -1.79
TOPBP1-204ENST00000505804 LINC00346Q8IVM7 164 aa3.9□□□□□ -1.79
TOPBP1-204ENST00000505804 MCEMP1Q8IX19 187 aa3.9□□□□□ -1.79
TOPBP1-204ENST00000505804 MUC20Q8N307 709 aaPredicted RBP3.9□□□□□ -1.79
TOPBP1-204ENST00000505804 MAB21L3Q8N8X9 362 aa3.9□□□□□ -1.79
TOPBP1-204ENST00000505804 OR52I2Q8NH67 350 aa3.9□□□□□ -1.79
TOPBP1-204ENST00000505804 PHF21AQ96BD5 680 aa3.9□□□□□ -1.79
TOPBP1-204ENST00000505804 CCDC34Q96HJ3 373 aa3.9□□□□□ -1.79
TOPBP1-204ENST00000505804 FEM1CQ96JP0 617 aa3.9□□□□□ -1.79
TOPBP1-204ENST00000505804 CEP295NLQ96MC4 621 aa3.9□□□□□ -1.79
TOPBP1-204ENST00000505804 PAFAH2Q99487 392 aa3.9□□□□□ -1.79
TOPBP1-204ENST00000505804 NEURL2Q9BR09 285 aa3.9□□□□□ -1.79
TOPBP1-204ENST00000505804 NUDT16L1Q9BRJ7 211 aaKnown RBP3.9□□□□□ -1.79
TOPBP1-204ENST00000505804 HGH1Q9BTY7 390 aa3.9□□□□□ -1.79
TOPBP1-204ENST00000505804 SEMA6AQ9H2E6 1030 aa3.9□□□□□ -1.79
TOPBP1-204ENST00000505804 ZNF556Q9HAH1 456 aa3.9□□□□□ -1.79
TOPBP1-204ENST00000505804 PDE7BQ9NP56 450 aa3.9□□□□□ -1.79
TOPBP1-204ENST00000505804 PLSCR4Q9NRQ2 329 aa3.9□□□□□ -1.79
TOPBP1-204ENST00000505804 DONSONQ9NYP3 566 aa3.9□□□□□ -1.79
TOPBP1-204ENST00000505804 WSB2Q9NYS7 404 aaPredicted RBP3.9□□□□□ -1.79
TOPBP1-204ENST00000505804 DLGAP4Q9Y2H0 992 aa3.9□□□□□ -1.79
TOPBP1-204ENST00000505804 TMEM178BH3BS89 294 aa3.89□□□□□ -1.79
TOPBP1-204ENST00000505804 PLK4O00444 970 aa3.89□□□□□ -1.79
TOPBP1-204ENST00000505804 ADAMDEC1O15204 470 aa3.89□□□□□ -1.79
TOPBP1-204ENST00000505804 EIF3DO15371 548 aaKnown RBP eCLIP3.89□□□□□ -1.79
TOPBP1-204ENST00000505804 BUB3O43684 328 aa3.89□□□□□ -1.79
TOPBP1-204ENST00000505804 PGM3O95394 542 aa3.89□□□□□ -1.79
TOPBP1-204ENST00000505804 PRLRP16471 622 aa3.89□□□□□ -1.79
TOPBP1-204ENST00000505804 ITGB6P18564 788 aa3.89□□□□□ -1.79
TOPBP1-204ENST00000505804 DGKAP23743 735 aa3.89□□□□□ -1.79
TOPBP1-204ENST00000505804 CTSCP53634 463 aa3.89□□□□□ -1.79
TOPBP1-204ENST00000505804 PNLIPRP2P54317 469 aa3.89□□□□□ -1.79
TOPBP1-204ENST00000505804 GAS1P54826 345 aa3.89□□□□□ -1.79
TOPBP1-204ENST00000505804 POU3F1Q03052 451 aaPredicted RBP3.89□□□□□ -1.79
TOPBP1-204ENST00000505804 PCLAFQ15004 111 aa3.89□□□□□ -1.79
TOPBP1-204ENST00000505804 TOMM20Q15388 145 aa3.89□□□□□ -1.79
TOPBP1-204ENST00000505804 CFAP58Q5T655 872 aa3.89□□□□□ -1.79
TOPBP1-204ENST00000505804 WBP2NLQ6ICG8 309 aa3.89□□□□□ -1.79
TOPBP1-204ENST00000505804 C9orf139Q6ZV77 190 aa3.89□□□□□ -1.79
TOPBP1-204ENST00000505804 ENOSF1Q7L5Y1 443 aa3.89□□□□□ -1.79
TOPBP1-204ENST00000505804 GALNT13Q8IUC8 556 aa3.89□□□□□ -1.79
TOPBP1-204ENST00000505804 SCML4Q8N228 414 aa3.89□□□□□ -1.79
TOPBP1-204ENST00000505804 GBGT1Q8N5D6 347 aa3.89□□□□□ -1.79
TOPBP1-204ENST00000505804 KBTBD3Q8NAB2 608 aa3.89□□□□□ -1.79
TOPBP1-204ENST00000505804 TBC1D16Q8TBP0 767 aa3.89□□□□□ -1.79
TOPBP1-204ENST00000505804 SLC22A18Q96BI1 424 aa3.89□□□□□ -1.79
TOPBP1-204ENST00000505804 LINGO1Q96FE5 620 aa3.89□□□□□ -1.79
TOPBP1-204ENST00000505804 NAF1Q96HR8 494 aaKnown RBP3.89□□□□□ -1.79
TOPBP1-204ENST00000505804 DACH2Q96NX9 599 aa3.89□□□□□ -1.79
TOPBP1-204ENST00000505804 POLR3CQ9BUI4 534 aaPredicted RBP3.89□□□□□ -1.79
TOPBP1-204ENST00000505804 TEX12Q9BXU0 123 aa3.89□□□□□ -1.79
TOPBP1-204ENST00000505804 PPIL3Q9H2H8 161 aaKnown RBP3.89□□□□□ -1.79
TOPBP1-204ENST00000505804 OSGEPL1Q9H4B0 414 aa3.89□□□□□ -1.79
TOPBP1-204ENST00000505804 WWOXQ9NZC7 414 aa3.89□□□□□ -1.79
TOPBP1-204ENST00000505804 RCC2Q9P258 522 aaKnown RBP3.89□□□□□ -1.79
TOPBP1-204ENST00000505804 SNX8Q9Y5X2 465 aa3.89□□□□□ -1.79
TOPBP1-204ENST00000505804 GREB1LQ9C091 1923 aaPredicted RBP3.89□□□□□ -1.79
TOPBP1-204ENST00000505804 SCN5AQ14524 2016 aa3.88□□□□□ -1.79
TOPBP1-204ENST00000505804 A0A1W2PS18 150 aa3.88□□□□□ -1.79
TOPBP1-204ENST00000505804 LNP1A1A4G5 178 aa3.88□□□□□ -1.79
TOPBP1-204ENST00000505804 OR2M5A3KFT3 312 aa3.88□□□□□ -1.79
TOPBP1-204ENST00000505804 C5orf60A6NFR6 353 aa3.88□□□□□ -1.79
TOPBP1-204ENST00000505804 KRTAP29-1A8MX34 341 aaPredicted RBP3.88□□□□□ -1.79
TOPBP1-204ENST00000505804 PRSS44E7EML9 344 aa3.88□□□□□ -1.79
TOPBP1-204ENST00000505804 C16orf97H3BN30 126 aa3.88□□□□□ -1.79
TOPBP1-204ENST00000505804 AVILO75366 819 aa3.88□□□□□ -1.79
TOPBP1-204ENST00000505804 ZWINTO95229 277 aa3.88□□□□□ -1.79
TOPBP1-204ENST00000505804 STARD3NLO95772 234 aa3.88□□□□□ -1.79
TOPBP1-204ENST00000505804 F7P08709 466 aaPredicted RBP3.88□□□□□ -1.79
TOPBP1-204ENST00000505804 KRT19P08727 400 aa3.88□□□□□ -1.79
TOPBP1-204ENST00000505804 GM2AP17900 193 aa3.88□□□□□ -1.79
TOPBP1-204ENST00000505804 TRIM21P19474 475 aaKnown RBP3.88□□□□□ -1.79
TOPBP1-204ENST00000505804 IFI35P80217 286 aaPredicted RBP3.88□□□□□ -1.79
TOPBP1-204ENST00000505804 CXCL9Q07325 125 aa3.88□□□□□ -1.79
TOPBP1-204ENST00000505804 TROAPQ12815 778 aa3.88□□□□□ -1.79
TOPBP1-204ENST00000505804 KRT33BQ14525 404 aa3.88□□□□□ -1.79
TOPBP1-204ENST00000505804 ZNF718Q3SXZ3 478 aa3.88□□□□□ -1.79
TOPBP1-204ENST00000505804 ZNF672Q499Z4 452 aaPredicted RBP3.88□□□□□ -1.79
TOPBP1-204ENST00000505804 RAB6CQ53S08 254 aa3.88□□□□□ -1.79
TOPBP1-204ENST00000505804 FAM76BQ5HYJ3 339 aa3.88□□□□□ -1.79
TOPBP1-204ENST00000505804 C16orf54Q6UWD8 224 aa3.88□□□□□ -1.79
TOPBP1-204ENST00000505804 FOXL2NBQ6ZUU3 175 aa3.88□□□□□ -1.79
TOPBP1-204ENST00000505804 KCTD8Q6ZWB6 473 aa3.88□□□□□ -1.79
TOPBP1-204ENST00000505804 C1orf52Q8N6N3 182 aaKnown RBP3.88□□□□□ -1.79
TOPBP1-204ENST00000505804 RBM15BQ8NDT2 890 aaKnown RBP3.88□□□□□ -1.79
TOPBP1-204ENST00000505804 OR13A1Q8NGR1 328 aa3.88□□□□□ -1.79
TOPBP1-204ENST00000505804 PPP4R1Q8TF05 950 aa3.88□□□□□ -1.79
TOPBP1-204ENST00000505804 TMEM255BQ8WV15 326 aa3.88□□□□□ -1.79
TOPBP1-204ENST00000505804 OXNAD1Q96HP4 312 aaPredicted RBP3.88□□□□□ -1.79
TOPBP1-204ENST00000505804 KIFC3Q9BVG8 833 aa3.88□□□□□ -1.79
TOPBP1-204ENST00000505804 RTN4RQ9BZR6 473 aa3.88□□□□□ -1.79
TOPBP1-204ENST00000505804 RAB6CQ9H0N0 254 aa3.88□□□□□ -1.79
TOPBP1-204ENST00000505804 GIMAP4Q9NUV9 329 aa3.88□□□□□ -1.79
TOPBP1-204ENST00000505804 TAS2R14Q9NYV8 317 aa3.88□□□□□ -1.79
TOPBP1-204ENST00000505804 MARCH4Q9P2E8 410 aaPredicted RBP3.88□□□□□ -1.79
TOPBP1-204ENST00000505804 SWAP70Q9UH65 585 aa3.88□□□□□ -1.79
TOPBP1-204ENST00000505804 HACL1Q9UJ83 578 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms