RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 BLACEA4D250 179 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 FBLL1A6NHQ2 334 aaKnown RBP6.2□□□□□ -1.42
CLCN3-204ENST00000504131 B2RBV5 119 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 FANCGO15287 622 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 LPXNO60711 386 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 ADAM11O75078 769 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 NDUFA10O95299 355 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 ALDH1A1P00352 501 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 LDLRP01130 860 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 CYP2A7P20853 494 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 BUD31P41223 144 aaPredicted RBP6.2□□□□□ -1.42
CLCN3-204ENST00000504131 PTPN12Q05209 780 aaKnown RBP6.2□□□□□ -1.42
CLCN3-204ENST00000504131 TRAF3Q13114 568 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 ALCAMQ13740 583 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 TSTQ16762 297 aaKnown RBP6.2□□□□□ -1.42
CLCN3-204ENST00000504131 DUSP6Q16828 381 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 LRRTM4Q86VH4 590 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 NEK7Q8TDX7 302 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 KLHL5Q96PQ7 755 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 SPATA9Q9BWV2 254 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 NIF3L1Q9GZT8 377 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 CCNB1IP1Q9NPC3 277 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 AAASQ9NRG9 546 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 C14orf105Q9NVL8 296 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 FAM120CQ9NX05 1096 aaKnown RBP6.2□□□□□ -1.42
CLCN3-204ENST00000504131 PCDHB11Q9Y5F2 797 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 WIF1Q9Y5W5 379 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 UBE4BO95155 1302 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 ADAM10O14672 748 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 SLITRK5O94991 958 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 MYL2P10916 166 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 BMP2P12643 396 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 CDC25AP30304 524 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 HMGCLP35914 325 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 ASIC1P78348 528 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 MBTD1Q05BQ5 628 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 ELP6Q0PNE2 266 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 CHI3L2Q15782 390 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 CHRNA2Q15822 529 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 AAK1Q2M2I8 961 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 SLC36A3Q495N2 470 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 C9orf152Q5JTZ5 239 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 BTBD8Q5XKL5 378 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 GPR153Q6NV75 609 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 IL27RAQ6UWB1 636 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.2□□□□□ -1.42
CLCN3-204ENST00000504131 MCUQ8NE86 351 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 OR10H5Q8NGA6 315 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 STK35Q8TDR2 534 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 P2RX5Q93086 422 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 BIRC8Q96P09 236 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 CSPG4P5Q96PW8 444 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 UBXN6Q9BZV1 441 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 RIMS4Q9H426 269 aaPredicted RBP6.2□□□□□ -1.42
CLCN3-204ENST00000504131 EBF3Q9H4W6 596 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 DHX33Q9H6R0 707 aaKnown RBP6.2□□□□□ -1.42
CLCN3-204ENST00000504131 NHEJ1Q9H9Q4 299 aaPredicted RBP6.2□□□□□ -1.42
CLCN3-204ENST00000504131 TUBG2Q9NRH3 451 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 SMLR1H3BR10 107 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 AIPO00170 330 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 PODXLO00592 558 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 RNF13O43567 381 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 TLL1O43897 1013 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 PAPSS2O95340 614 aaPredicted RBP6.2□□□□□ -1.42
CLCN3-204ENST00000504131 SERPING1P05155 500 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 MPOP05164 745 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 PCCAP05165 728 aaPredicted RBP6.2□□□□□ -1.42
CLCN3-204ENST00000504131 CYP2D6P10635 497 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 CKMT1AP12532 417 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 EPHA5P54756 1037 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 RPL19P84098 196 aaKnown RBP6.2□□□□□ -1.42
CLCN3-204ENST00000504131 SEL1L3Q68CR1 1132 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 XKR5Q6UX68 686 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 ADAMTSL2Q86TH1 951 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 ZNF514Q96K75 400 aaPredicted RBP6.2□□□□□ -1.42
CLCN3-204ENST00000504131 RNF145Q96MT1 663 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 WFIKKN1Q96NZ8 548 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 DMRTA2Q96SC8 542 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 S100A13Q99584 98 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 MEIS3Q99687 375 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 MGAT4CQ9UBM8 478 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 DKKL1Q9UK85 242 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 CDY2AQ9Y6F7 541 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 WASF2Q9Y6W5 498 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 COL17A1Q9UMD9 1497 aaPredicted RBP6.2□□□□□ -1.42
CLCN3-204ENST00000504131 ARHGEF12Q9NZN5 1544 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 TET3O43151 1660 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 ABHD14A-ACY1A0A1B0GW23 586 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 SMAD7O15105 426 aaKnown RBP6.2□□□□□ -1.42
CLCN3-204ENST00000504131 TSPAN3O60637 253 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 AK1P00568 194 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 TUBB3Q13509 450 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 IL18Q14116 193 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 KRTCAP3Q53RY4 240 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 SLC9C2Q5TAH2 1124 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 FAXCQ5TGI0 409 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 LCN1P1Q5VSP4 162 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 IRAK1BP1Q5VVH5 260 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 HPS6Q86YV9 775 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 ETFBKMTQ8IXQ9 262 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms