RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 FTH1P19P0C7X4 201 aa24.73■■□□□ 1.55
LSM6-202ENST00000502781 CTAGE8P0CG41 777 aa24.73■■□□□ 1.55
LSM6-202ENST00000502781 MYF5P13349 255 aa24.73■■□□□ 1.55
LSM6-202ENST00000502781 ATP1B2P14415 290 aaPredicted RBP24.73■■□□□ 1.55
LSM6-202ENST00000502781 DRG2P55039 364 aaKnown RBP24.73■■□□□ 1.55
LSM6-202ENST00000502781 FASTKD1Q53R41 847 aaKnown RBP24.73■■□□□ 1.55
LSM6-202ENST00000502781 LYPLAL1Q5VWZ2 237 aa24.73■■□□□ 1.55
LSM6-202ENST00000502781 C8orf74Q6P047 294 aa24.73■■□□□ 1.55
LSM6-202ENST00000502781 CTAGE6Q86UF2 777 aa24.73■■□□□ 1.55
LSM6-202ENST00000502781 CTAGE4Q8IX94 777 aa24.73■■□□□ 1.55
LSM6-202ENST00000502781 PNPLA1Q8N8W4 532 aa24.73■■□□□ 1.55
LSM6-202ENST00000502781 NOA1Q8NC60 698 aaKnown RBP24.73■■□□□ 1.55
LSM6-202ENST00000502781 STAMBPL1Q96FJ0 436 aa24.73■■□□□ 1.55
LSM6-202ENST00000502781 DCUN1D1Q96GG9 259 aa24.73■■□□□ 1.55
LSM6-202ENST00000502781 PWWP2AQ96N64 755 aa24.73■■□□□ 1.55
LSM6-202ENST00000502781 LRRC1Q9BTT6 524 aa24.73■■□□□ 1.55
LSM6-202ENST00000502781 KLC4Q9NSK0 619 aa24.73■■□□□ 1.55
LSM6-202ENST00000502781 CATSPERZQ9NTU4 200 aa24.73■■□□□ 1.55
LSM6-202ENST00000502781 MAD1L1Q9Y6D9 718 aa24.73■■□□□ 1.55
LSM6-202ENST00000502781 RPS6KL1Q9Y6S9 549 aa24.73■■□□□ 1.55
LSM6-202ENST00000502781 ZNF500O60304 480 aaPredicted RBP24.72■■□□□ 1.55
LSM6-202ENST00000502781 BANF1O75531 89 aa24.72■■□□□ 1.55
LSM6-202ENST00000502781 POP7O75817 140 aaKnown RBP24.72■■□□□ 1.55
LSM6-202ENST00000502781 RPIAP49247 311 aa24.72■■□□□ 1.55
LSM6-202ENST00000502781 PRLHRP49683 370 aa24.72■■□□□ 1.55
LSM6-202ENST00000502781 DUSP3P51452 185 aaPredicted RBP24.72■■□□□ 1.55
LSM6-202ENST00000502781 DMPKQ09013 629 aa24.72■■□□□ 1.55
LSM6-202ENST00000502781 NR0B2Q15466 257 aa24.72■■□□□ 1.55
LSM6-202ENST00000502781 HIF1AQ16665 826 aa24.72■■□□□ 1.55
LSM6-202ENST00000502781 INSCQ1MX18 579 aa24.72■■□□□ 1.55
LSM6-202ENST00000502781 DET1Q7L5Y6 550 aa24.72■■□□□ 1.55
LSM6-202ENST00000502781 NAGSQ8N159 534 aa24.72■■□□□ 1.55
LSM6-202ENST00000502781 ZDHHC1Q8WTX9 485 aa24.72■■□□□ 1.55
LSM6-202ENST00000502781 NAT14Q8WUY8 206 aa24.72■■□□□ 1.55
LSM6-202ENST00000502781 SEC14L1Q92503 715 aa24.72■■□□□ 1.55
LSM6-202ENST00000502781 LRRC39Q96DD0 335 aa24.72■■□□□ 1.55
LSM6-202ENST00000502781 EBNA1BP2Q99848 306 aaKnown RBP24.72■■□□□ 1.55
LSM6-202ENST00000502781 WDR83Q9BRX9 315 aaKnown RBP24.72■■□□□ 1.55
LSM6-202ENST00000502781 SIRPGQ9P1W8 387 aa24.72■■□□□ 1.55
LSM6-202ENST00000502781 GULP1Q9UBP9 304 aa24.72■■□□□ 1.55
LSM6-202ENST00000502781 TBC1D29Q9UFV1 150 aa24.72■■□□□ 1.55
LSM6-202ENST00000502781 PADI4Q9UM07 663 aa24.72■■□□□ 1.55
LSM6-202ENST00000502781 BPTFQ12830 3046 aa24.72■■□□□ 1.55
LSM6-202ENST00000502781 BHMG1C9JSJ3 638 aaPredicted RBP24.71■■□□□ 1.55
LSM6-202ENST00000502781 E7ESA3 106 aa24.71■■□□□ 1.55
LSM6-202ENST00000502781 CD3EAPO15446 510 aaKnown RBP24.71■■□□□ 1.55
LSM6-202ENST00000502781 AP2A2O94973 939 aa24.71■■□□□ 1.55
LSM6-202ENST00000502781 PGAM1P18669 254 aa24.71■■□□□ 1.55
LSM6-202ENST00000502781 PAMP19021 973 aa24.71■■□□□ 1.55
LSM6-202ENST00000502781 NSG1P42857 185 aa24.71■■□□□ 1.55
LSM6-202ENST00000502781 DAB2P98082 770 aa24.71■■□□□ 1.55
LSM6-202ENST00000502781 CALCOCO2Q13137 446 aa24.71■■□□□ 1.55
LSM6-202ENST00000502781 ILKQ13418 452 aa24.71■■□□□ 1.55
LSM6-202ENST00000502781 HLTFQ14527 1009 aaKnown RBP eCLIP24.71■■□□□ 1.55
LSM6-202ENST00000502781 PLA2G4EQ3MJ16 856 aa24.71■■□□□ 1.55
LSM6-202ENST00000502781 BBS9Q3SYG4 887 aa24.71■■□□□ 1.55
LSM6-202ENST00000502781 AARS2Q5JTZ9 985 aaKnown RBP24.71■■□□□ 1.55
LSM6-202ENST00000502781 IGDCC3Q8IVU1 814 aa24.71■■□□□ 1.55
LSM6-202ENST00000502781 CEP112Q8N8E3 955 aa24.71■■□□□ 1.55
LSM6-202ENST00000502781 GPR150Q8NGU9 434 aa24.71■■□□□ 1.55
LSM6-202ENST00000502781 ZNF669Q96BR6 464 aaPredicted RBP24.71■■□□□ 1.55
LSM6-202ENST00000502781 NAT9Q9BTE0 207 aa24.71■■□□□ 1.55
LSM6-202ENST00000502781 EVA1BQ9NVM1 165 aa24.71■■□□□ 1.55
LSM6-202ENST00000502781 APOBEC2Q9Y235 224 aaKnown RBP24.71■■□□□ 1.55
LSM6-202ENST00000502781 FAM169AQ9Y6X4 670 aa24.71■■□□□ 1.55
LSM6-202ENST00000502781 KLHL33A6NCF5 533 aa24.7■■□□□ 1.55
LSM6-202ENST00000502781 B4DGG1 531 aa24.7■■□□□ 1.55
LSM6-202ENST00000502781 EML2O95834 649 aa24.7■■□□□ 1.55
LSM6-202ENST00000502781 ARL4CP56559 192 aa24.7■■□□□ 1.55
LSM6-202ENST00000502781 C14orf28Q4W4Y0 310 aa24.7■■□□□ 1.55
LSM6-202ENST00000502781 N4BP2L1Q5TBK1 243 aaPredicted RBP24.7■■□□□ 1.55
LSM6-202ENST00000502781 XKR5Q6UX68 686 aa24.7■■□□□ 1.55
LSM6-202ENST00000502781 AMZ2Q86W34 360 aa24.7■■□□□ 1.55
LSM6-202ENST00000502781 CLDN19Q8N6F1 224 aa24.7■■□□□ 1.55
LSM6-202ENST00000502781 BEND7Q8N7W2 519 aaPredicted RBP24.7■■□□□ 1.55
LSM6-202ENST00000502781 ART4Q93070 314 aa24.7■■□□□ 1.55
LSM6-202ENST00000502781 TTC1Q99614 292 aa24.7■■□□□ 1.55
LSM6-202ENST00000502781 TEX264Q9Y6I9 313 aa24.7■■□□□ 1.55
LSM6-202ENST00000502781 TTC4O95801 387 aa24.69■■□□□ 1.54
LSM6-202ENST00000502781 POLBP06746 335 aa24.69■■□□□ 1.54
LSM6-202ENST00000502781 GP1BAP07359 652 aa24.69■■□□□ 1.54
LSM6-202ENST00000502781 PPARGP37231 505 aaPredicted RBP24.69■■□□□ 1.54
LSM6-202ENST00000502781 TRADDQ15628 312 aa24.69■■□□□ 1.54
LSM6-202ENST00000502781 ZNF658BQ4V348 819 aaPredicted RBP24.69■■□□□ 1.54
LSM6-202ENST00000502781 GUSBP11Q6P575 273 aa24.69■■□□□ 1.54
LSM6-202ENST00000502781 WASH2PQ6VEQ5 465 aa24.69■■□□□ 1.54
LSM6-202ENST00000502781 CCNJLQ8IV13 435 aa24.69■■□□□ 1.54
LSM6-202ENST00000502781 SFRP1Q8N474 314 aa24.69■■□□□ 1.54
LSM6-202ENST00000502781 OR2L2Q8NH16 312 aa24.69■■□□□ 1.54
LSM6-202ENST00000502781 L2HGDHQ9H9P8 463 aa24.69■■□□□ 1.54
LSM6-202ENST00000502781 PLAC1Q9HBJ0 212 aa24.69■■□□□ 1.54
LSM6-202ENST00000502781 WASH6PQ9NQA3 447 aa24.69■■□□□ 1.54
LSM6-202ENST00000502781 PRSS21Q9Y6M0 314 aa24.69■■□□□ 1.54
LSM6-202ENST00000502781 ZFC3H1O60293 1989 aaKnown RBP24.69■■□□□ 1.54
LSM6-202ENST00000502781 ASXL3Q9C0F0 2248 aa24.69■■□□□ 1.54
LSM6-202ENST00000502781 MGAT4DA6NG13 374 aa24.68■■□□□ 1.54
LSM6-202ENST00000502781 OR1I1O60431 355 aa24.68■■□□□ 1.54
LSM6-202ENST00000502781 RFPL3O75679 317 aa24.68■■□□□ 1.54
LSM6-202ENST00000502781 F3P13726 295 aa24.68■■□□□ 1.54
LSM6-202ENST00000502781 VCLP18206 1134 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms