RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 TLE3Q04726 772 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 RBPJQ06330 500 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 KLF10Q13118 480 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 KCNC3Q14003 757 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 DPYSQ14117 519 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 GAMTQ14353 236 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 FAM187BQ17R55 369 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 SPDYE7PQ495Y7 208 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 KCTD21Q4G0X4 260 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 CXorf66Q5JRM2 361 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 KRT39Q6A163 491 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 OR6B2Q6IFH4 312 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 ACSM6Q6P461 480 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 GLB1LQ6UWU2 654 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 POLNQ7Z5Q5 900 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 TAF8Q7Z7C8 310 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 CLNKQ7Z7G1 428 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 FAM219AQ8IW50 185 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 SERPINA12Q8IW75 414 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 MFN1Q8IWA4 741 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 DDIASQ8IXT1 998 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 KDM8Q8N371 416 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 RASGEF1CQ8N431 466 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 FAM133AQ8N9E0 248 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 SETD9Q8NE22 299 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 SUPT20HQ8NEM7 779 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 OR52M1Q8NGK5 317 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 POC1BQ8TC44 478 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 EDC3Q96F86 508 aaKnown RBP4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 FAM89AQ96GI7 184 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 HES6Q96HZ4 224 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 ZNF560Q96MR9 790 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 TOX2Q96NM4 488 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 GNRHR2Q96P88 292 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 RBM14Q96PK6 669 aaKnown RBP4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 KRTAP4-12Q9BQ66 201 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 WDR83Q9BRX9 315 aaKnown RBP4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 WDR26Q9H7D7 661 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 ASAH2Q9NR71 780 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 DNAJC17Q9NVM6 304 aaKnown RBP4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 RBM28Q9NW13 759 aaKnown RBP4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 ERAP1Q9NZ08 941 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 ANKMY1Q9P2S6 941 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 ZMAT5Q9UDW3 170 aaKnown RBP4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 STEAP1Q9UHE8 339 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 SERTAD3Q9UJW9 196 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 ITGA11Q9UKX5 1188 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 SLC8A2Q9UPR5 921 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 SCN7AQ01118 1682 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 KIAA1217Q5T5P2 1943 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 RIC1Q4ADV7 1423 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 BCORQ6W2J9 1755 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 KIF16BQ96L93 1317 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 FAM237AA0A1B0GTK4 181 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 LRRIQ4A6NIV6 560 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 ZAR1LA6NP61 321 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 M0QX08 132 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 SLC30A4O14863 429 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 ANGPT2O15123 496 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 KIF1CO43896 1103 aaKnown RBP4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 SPAG6O75602 509 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 GPANK1O95872 356 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 RHOP08100 348 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 VIMP08670 466 aaKnown RBP4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 MMP10P09238 476 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 VCLP18206 1134 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 MYF6P23409 242 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 GCSHP23434 173 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 AZGP1P25311 298 aaKnown RBP4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 POU1F1P28069 291 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 CNR2P34972 360 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 NHLH2Q02577 135 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 MAP2K1Q02750 393 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 ACSM1Q08AH1 577 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 ACSM2AQ08AH3 577 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 OLIG2Q13516 323 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 RNPS1Q15287 305 aaKnown RBP4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 NAB2Q15742 525 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 CSRP2Q16527 193 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 CBWD6Q4V339 395 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 MDH1BQ5I0G3 518 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 CBWD3Q5JTY5 395 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 TEX35Q5T0J7 233 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 ACSM2BQ68CK6 577 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 TMEM211Q6ICI0 200 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 NEK5Q6P3R8 708 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 SLC36A4Q6YBV0 504 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 TRIM72Q6ZMU5 477 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 HAUS6Q7Z4H7 955 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 AMZ2Q86W34 360 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 CIR1Q86X95 450 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 TDRPQ86YL5 185 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 P3H2Q8IVL5 708 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 SCYL3Q8IZE3 742 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 LRRC43Q8N309 656 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 TSPAN14Q8NG11 270 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 OR56A1Q8NGH5 318 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 DNASE1L2Q92874 299 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 ST6GALNAC6Q969X2 333 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms