RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 FAM136AQ96C01 138 aa8.27□□□□□ -1.09
USP54-215ENST00000497106 ZNF778Q96MU6 729 aa8.27□□□□□ -1.09
USP54-215ENST00000497106 ERVK-6Q9BXR3 956 aa8.27□□□□□ -1.09
USP54-215ENST00000497106 WDR26Q9H7D7 661 aa8.27□□□□□ -1.09
USP54-215ENST00000497106 ACTR8Q9H981 624 aa8.27□□□□□ -1.09
USP54-215ENST00000497106 PPIL1Q9Y3C6 166 aa8.27□□□□□ -1.09
USP54-215ENST00000497106 NCF1BA6NI72 391 aaPredicted RBP8.27□□□□□ -1.09
USP54-215ENST00000497106 NCF1CA8MVU1 366 aaPredicted RBP8.27□□□□□ -1.09
USP54-215ENST00000497106 CCNDBP1O95273 360 aa8.27□□□□□ -1.09
USP54-215ENST00000497106 SERPINA6P08185 405 aa8.27□□□□□ -1.09
USP54-215ENST00000497106 SLC35G4P0C7Q5 338 aa8.27□□□□□ -1.09
USP54-215ENST00000497106 SLC35E2BP0CK96 405 aa8.27□□□□□ -1.09
USP54-215ENST00000497106 NCF1P14598 390 aaPredicted RBP8.27□□□□□ -1.09
USP54-215ENST00000497106 SP100P23497 879 aaPredicted RBP8.27□□□□□ -1.09
USP54-215ENST00000497106 GKP32189 559 aa8.27□□□□□ -1.09
USP54-215ENST00000497106 WASP42768 502 aa8.27□□□□□ -1.09
USP54-215ENST00000497106 PDCD2Q16342 344 aaPredicted RBP8.27□□□□□ -1.09
USP54-215ENST00000497106 TMEM52BQ4KMG9 183 aa8.27□□□□□ -1.09
USP54-215ENST00000497106 TECRLQ5HYJ1 363 aa8.27□□□□□ -1.09
USP54-215ENST00000497106 TRIM48Q8IWZ4 208 aa8.27□□□□□ -1.09
USP54-215ENST00000497106 HM13Q8TCT9 377 aa8.27□□□□□ -1.09
USP54-215ENST00000497106 TACO1Q9BSH4 297 aaKnown RBP8.27□□□□□ -1.09
USP54-215ENST00000497106 GATA5Q9BWX5 397 aaPredicted RBP8.27□□□□□ -1.09
USP54-215ENST00000497106 RMI1Q9H9A7 625 aa8.27□□□□□ -1.09
USP54-215ENST00000497106 PREBQ9HCU5 417 aa8.27□□□□□ -1.09
USP54-215ENST00000497106 FBXL12Q9NXK8 326 aa8.27□□□□□ -1.09
USP54-215ENST00000497106 CACNA2D2Q9NY47 1150 aa8.27□□□□□ -1.09
USP54-215ENST00000497106 MARCH4Q9P2E8 410 aaPredicted RBP8.27□□□□□ -1.09
USP54-215ENST00000497106 SNX6Q9UNH7 406 aa8.27□□□□□ -1.09
USP54-215ENST00000497106 DNMT3AQ9Y6K1 912 aaPredicted RBP8.27□□□□□ -1.09
USP54-215ENST00000497106 OAS3Q9Y6K5 1087 aaKnown RBP8.27□□□□□ -1.09
USP54-215ENST00000497106 NPIPB15A6NHN6 443 aaPredicted RBP8.27□□□□□ -1.09
USP54-215ENST00000497106 SLC28A1O00337 649 aa8.27□□□□□ -1.09
USP54-215ENST00000497106 AZIN1O14977 448 aa8.27□□□□□ -1.09
USP54-215ENST00000497106 RGS14O43566 566 aa8.27□□□□□ -1.09
USP54-215ENST00000497106 SLC6A11P48066 632 aa8.27□□□□□ -1.09
USP54-215ENST00000497106 PAQR3Q6TCH7 311 aa8.27□□□□□ -1.09
USP54-215ENST00000497106 DET1Q7L5Y6 550 aa8.27□□□□□ -1.09
USP54-215ENST00000497106 LRRC70Q7Z2Q7 622 aa8.27□□□□□ -1.09
USP54-215ENST00000497106 CPNE9Q8IYJ1 553 aa8.27□□□□□ -1.09
USP54-215ENST00000497106 TSTD1Q8NFU3 115 aa8.27□□□□□ -1.09
USP54-215ENST00000497106 MZB1Q8WU39 189 aa8.27□□□□□ -1.09
USP54-215ENST00000497106 BTN2A2Q8WVV5 523 aa8.27□□□□□ -1.09
USP54-215ENST00000497106 ECHDC3Q96DC8 303 aa8.27□□□□□ -1.09
USP54-215ENST00000497106 HIC2Q96JB3 615 aa8.27□□□□□ -1.09
USP54-215ENST00000497106 PCBD2Q9H0N5 130 aa8.27□□□□□ -1.09
USP54-215ENST00000497106 UBE2ZQ9H832 354 aaPredicted RBP8.27□□□□□ -1.09
USP54-215ENST00000497106 SMOXQ9NWM0 555 aa8.27□□□□□ -1.09
USP54-215ENST00000497106 UBDO15205 165 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 COPAP53621 1224 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 IRF9Q00978 393 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 CAMK1Q14012 370 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 NAA25Q14CX7 972 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 PCLAFQ15004 111 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 CYP2A13Q16696 494 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 KIAA0907Q7Z7F0 614 aaPredicted RBP8.26□□□□□ -1.09
USP54-215ENST00000497106 CUZD1Q86UP6 607 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 GALNT13Q8IUC8 556 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 AGR3Q8TD06 166 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 TUBGCP3Q96CW5 907 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 MRPL1Q9BYD6 325 aaKnown RBP8.26□□□□□ -1.09
USP54-215ENST00000497106 BTBD1Q9H0C5 482 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 ELOVL6Q9H5J4 265 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 CD84Q9UIB8 345 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 INPP4BO15327 924 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 NIPSNAP2O75323 286 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 CISD3P0C7P0 127 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 HNRNPLP14866 589 aaKnown RBP eCLIP8.26□□□□□ -1.09
USP54-215ENST00000497106 CD1DP15813 335 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 IDSP22304 550 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 GALK1P51570 392 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 GALNT1Q10472 559 aaPredicted RBP8.26□□□□□ -1.09
USP54-215ENST00000497106 PTK2BQ14289 1009 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 LRIT3Q3SXY7 679 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 SYCE2Q6PIF2 218 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 TMEM220Q6QAJ8 160 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 LRRTM4Q86VH4 590 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 AVL9Q8NBF6 648 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 PPFIBP2Q8ND30 876 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 FAM174AQ8TBP5 190 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 FAM3CQ92520 227 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 PDLIM5Q96HC4 596 aaKnown RBP8.26□□□□□ -1.09
USP54-215ENST00000497106 VPS35Q96QK1 796 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 MECRQ9BV79 373 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 VCX3BQ9H321 246 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 MMADHCQ9H3L0 296 aaPredicted RBP8.26□□□□□ -1.09
USP54-215ENST00000497106 SGK2Q9HBY8 427 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 DNAJC11Q9NVH1 559 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 GID8Q9NWU2 228 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 WASF2Q9Y6W5 498 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 TK2O00142 265 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 FCHO1O14526 889 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 ANGPT2O15123 496 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 AP1G1O43747 822 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 PRLP01236 227 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 PCCBP05166 539 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 UGT1A6P19224 532 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 UGT1A1P22309 533 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 UGT1A4P22310 534 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 UGT1A3P35503 534 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms