RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 LINC00271P0C7V0 271 aa4.33□□□□□ -1.72
SMC4-224ENST00000494612 ITGA2P17301 1181 aa4.33□□□□□ -1.72
SMC4-224ENST00000494612 S1PR1P21453 382 aa4.33□□□□□ -1.72
SMC4-224ENST00000494612 UGT1A1P22309 533 aa4.33□□□□□ -1.72
SMC4-224ENST00000494612 DNASE1P24855 282 aa4.33□□□□□ -1.72
SMC4-224ENST00000494612 GNL1P36915 607 aaPredicted RBP4.33□□□□□ -1.72
SMC4-224ENST00000494612 LMAN1P49257 510 aa4.33□□□□□ -1.72
SMC4-224ENST00000494612 PNLIPRP2P54317 469 aa4.33□□□□□ -1.72
SMC4-224ENST00000494612 DSCR9P59020 149 aa4.33□□□□□ -1.72
SMC4-224ENST00000494612 UBXN2AP68543 259 aa4.33□□□□□ -1.72
SMC4-224ENST00000494612 GRAPQ13588 217 aa4.33□□□□□ -1.72
SMC4-224ENST00000494612 TNFAIP1Q13829 316 aa4.33□□□□□ -1.72
SMC4-224ENST00000494612 KEAP1Q14145 624 aa4.33□□□□□ -1.72
SMC4-224ENST00000494612 FAM98BQ52LJ0 330 aaKnown RBP4.33□□□□□ -1.72
SMC4-224ENST00000494612 KRTCAP3Q53RY4 240 aa4.33□□□□□ -1.72
SMC4-224ENST00000494612 GARNL3Q5VVW2 1013 aa4.33□□□□□ -1.72
SMC4-224ENST00000494612 PAPD4Q6PIY7 484 aaKnown RBP4.33□□□□□ -1.72
SMC4-224ENST00000494612 ATG9AQ7Z3C6 839 aa4.33□□□□□ -1.72
SMC4-224ENST00000494612 RBM23Q86U06 439 aaKnown RBP4.33□□□□□ -1.72
SMC4-224ENST00000494612 SATL1Q86VE3 508 aa4.33□□□□□ -1.72
SMC4-224ENST00000494612 TMPRSS12Q86WS5 348 aa4.33□□□□□ -1.72
SMC4-224ENST00000494612 SPATA2LQ8IUW3 424 aaPredicted RBP4.33□□□□□ -1.72
SMC4-224ENST00000494612 FBXO39Q8N4B4 442 aa4.33□□□□□ -1.72
SMC4-224ENST00000494612 AVL9Q8NBF6 648 aa4.33□□□□□ -1.72
SMC4-224ENST00000494612 LILRB1Q8NHL6 650 aaPredicted RBP4.33□□□□□ -1.72
SMC4-224ENST00000494612 BBS10Q8TAM1 723 aa4.33□□□□□ -1.72
SMC4-224ENST00000494612 NR4A3Q92570 626 aa4.33□□□□□ -1.72
SMC4-224ENST00000494612 ABTB1Q969K4 478 aaPredicted RBP4.33□□□□□ -1.72
SMC4-224ENST00000494612 ADGRG7Q96K78 797 aa4.33□□□□□ -1.72
SMC4-224ENST00000494612 QRFPRQ96P65 431 aa4.33□□□□□ -1.72
SMC4-224ENST00000494612 GFI1Q99684 422 aa4.33□□□□□ -1.72
SMC4-224ENST00000494612 TMEM39BQ9GZU3 492 aa4.33□□□□□ -1.72
SMC4-224ENST00000494612 LRMDAQ9H2I8 198 aa4.33□□□□□ -1.72
SMC4-224ENST00000494612 GOLPH3LQ9H4A5 285 aa4.33□□□□□ -1.72
SMC4-224ENST00000494612 CHMP1AQ9HD42 196 aaPredicted RBP4.33□□□□□ -1.72
SMC4-224ENST00000494612 SMARCAL1Q9NZC9 954 aa4.33□□□□□ -1.72
SMC4-224ENST00000494612 KLHL9Q9P2J3 617 aa4.33□□□□□ -1.72
SMC4-224ENST00000494612 DNAJB4Q9UDY4 337 aa4.33□□□□□ -1.72
SMC4-224ENST00000494612 SIX4Q9UIU6 781 aa4.33□□□□□ -1.72
SMC4-224ENST00000494612 PPIEQ9UNP9 301 aaKnown RBP4.33□□□□□ -1.72
SMC4-224ENST00000494612 EXO1Q9UQ84 846 aaKnown RBP4.33□□□□□ -1.72
SMC4-224ENST00000494612 OR2W1Q9Y3N9 320 aa4.33□□□□□ -1.72
SMC4-224ENST00000494612 KAT6BQ8WYB5 2073 aa4.33□□□□□ -1.72
SMC4-224ENST00000494612 MROH2BQ7Z745 1585 aa4.32□□□□□ -1.72
SMC4-224ENST00000494612 PRAG1Q86YV5 1406 aa4.32□□□□□ -1.72
SMC4-224ENST00000494612 LNP1A1A4G5 178 aa4.32□□□□□ -1.72
SMC4-224ENST00000494612 TMEM8BA6NDV4 472 aa4.32□□□□□ -1.72
SMC4-224ENST00000494612 ACOT8O14734 319 aa4.32□□□□□ -1.72
SMC4-224ENST00000494612 TCERG1O14776 1098 aaKnown RBP4.32□□□□□ -1.72
SMC4-224ENST00000494612 CLGNO14967 610 aa4.32□□□□□ -1.72
SMC4-224ENST00000494612 PLOD3O60568 738 aa4.32□□□□□ -1.72
SMC4-224ENST00000494612 GAGE7O76087 117 aa4.32□□□□□ -1.72
SMC4-224ENST00000494612 KRT19P08727 400 aa4.32□□□□□ -1.72
SMC4-224ENST00000494612 GAGE12FP0CL80 117 aa4.32□□□□□ -1.72
SMC4-224ENST00000494612 GAGE12GP0CL81 117 aa4.32□□□□□ -1.72
SMC4-224ENST00000494612 GAGE12IP0CL82 117 aa4.32□□□□□ -1.72
SMC4-224ENST00000494612 NR2F1P10589 423 aa4.32□□□□□ -1.72
SMC4-224ENST00000494612 FGF3P11487 239 aaPredicted RBP4.32□□□□□ -1.72
SMC4-224ENST00000494612 RELQ04864 619 aaPredicted RBP4.32□□□□□ -1.72
SMC4-224ENST00000494612 EGR4Q05215 589 aa4.32□□□□□ -1.72
SMC4-224ENST00000494612 GAGE1Q13065 139 aa4.32□□□□□ -1.72
SMC4-224ENST00000494612 GAGE4Q13068 117 aa4.32□□□□□ -1.72
SMC4-224ENST00000494612 SYT16Q17RD7 645 aa4.32□□□□□ -1.72
SMC4-224ENST00000494612 C9orf50Q5SZB4 431 aa4.32□□□□□ -1.72
SMC4-224ENST00000494612 C6orf163Q5TEZ5 329 aa4.32□□□□□ -1.72
SMC4-224ENST00000494612 LCN10Q6JVE6 187 aa4.32□□□□□ -1.72
SMC4-224ENST00000494612 NAA16Q6N069 864 aaPredicted RBP4.32□□□□□ -1.72
SMC4-224ENST00000494612 LDB1Q86U70 411 aaPredicted RBP4.32□□□□□ -1.72
SMC4-224ENST00000494612 GALNT13Q8IUC8 556 aa4.32□□□□□ -1.72
SMC4-224ENST00000494612 RNF113BQ8IZP6 322 aaKnown RBP4.32□□□□□ -1.72
SMC4-224ENST00000494612 SLC5A8Q8N695 610 aa4.32□□□□□ -1.72
SMC4-224ENST00000494612 SYT2Q8N9I0 419 aaPredicted RBP4.32□□□□□ -1.72
SMC4-224ENST00000494612 TBC1D16Q8TBP0 767 aa4.32□□□□□ -1.72
SMC4-224ENST00000494612 DNASE2BQ8WZ79 361 aa4.32□□□□□ -1.72
SMC4-224ENST00000494612 PIGTQ969N2 578 aa4.32□□□□□ -1.72
SMC4-224ENST00000494612 TMCO6Q96DC7 493 aa4.32□□□□□ -1.72
SMC4-224ENST00000494612 RTP4Q96DX8 246 aa4.32□□□□□ -1.72
SMC4-224ENST00000494612 RTN4RQ9BZR6 473 aa4.32□□□□□ -1.72
SMC4-224ENST00000494612 TM6SF1Q9BZW5 370 aa4.32□□□□□ -1.72
SMC4-224ENST00000494612 PPIL3Q9H2H8 161 aaKnown RBP4.32□□□□□ -1.72
SMC4-224ENST00000494612 MAGIXQ9H6Y5 334 aa4.32□□□□□ -1.72
SMC4-224ENST00000494612 MCM9Q9NXL9 1143 aa4.32□□□□□ -1.72
SMC4-224ENST00000494612 TAB2Q9NYJ8 693 aa4.32□□□□□ -1.72
SMC4-224ENST00000494612 ZNF224Q9NZL3 707 aa4.32□□□□□ -1.72
SMC4-224ENST00000494612 UBA2Q9UBT2 640 aaPredicted RBP4.32□□□□□ -1.72
SMC4-224ENST00000494612 AMDHD2Q9Y303 409 aa4.32□□□□□ -1.72
SMC4-224ENST00000494612 TCF20Q9UGU0 1960 aaKnown RBP4.32□□□□□ -1.72
SMC4-224ENST00000494612 SAA2-SAA4A0A096LPE2 208 aa4.31□□□□□ -1.72
SMC4-224ENST00000494612 CLEC18AA5D8T8 446 aa4.31□□□□□ -1.72
SMC4-224ENST00000494612 GOLGA6L9A6NEM1 432 aa4.31□□□□□ -1.72
SMC4-224ENST00000494612 ZNF587BE7ETH6 402 aa4.31□□□□□ -1.72
SMC4-224ENST00000494612 TMEM178BH3BS89 294 aa4.31□□□□□ -1.72
SMC4-224ENST00000494612 PSMD10O75832 226 aa4.31□□□□□ -1.72
SMC4-224ENST00000494612 PRLRP16471 622 aa4.31□□□□□ -1.72
SMC4-224ENST00000494612 GABRA5P31644 462 aa4.31□□□□□ -1.72
SMC4-224ENST00000494612 LIG4P49917 911 aa4.31□□□□□ -1.72
SMC4-224ENST00000494612 CALD1Q05682 793 aaKnown RBP4.31□□□□□ -1.72
SMC4-224ENST00000494612 RASA2Q15283 850 aa4.31□□□□□ -1.72
SMC4-224ENST00000494612 TMEM35AQ53FP2 167 aa4.31□□□□□ -1.72
SMC4-224ENST00000494612 IRAK1BP1Q5VVH5 260 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms