RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 PRAMEF33A0A0G2JMD5 474 aa32.67■■■□□ 2.82
CBX4-203ENST00000494546 PRR19A6NJB7 356 aa32.67■■■□□ 2.82
CBX4-203ENST00000494546 OR2AG2A6NM03 316 aa32.67■■■□□ 2.82
CBX4-203ENST00000494546 PRAMEF10O60809 474 aa32.67■■■□□ 2.82
CBX4-203ENST00000494546 VIPP01282 170 aa32.67■■■□□ 2.82
CBX4-203ENST00000494546 CCL4P13236 92 aa32.67■■■□□ 2.82
CBX4-203ENST00000494546 XRCC1P18887 633 aaPredicted RBP32.67■■■□□ 2.82
CBX4-203ENST00000494546 AKT1P31749 480 aa32.67■■■□□ 2.82
CBX4-203ENST00000494546 DRG2P55039 364 aaKnown RBP32.67■■■□□ 2.82
CBX4-203ENST00000494546 UCNP55089 124 aa32.67■■■□□ 2.82
CBX4-203ENST00000494546 TMPRSS3P57727 454 aa32.67■■■□□ 2.82
CBX4-203ENST00000494546 UBE2IP63279 158 aaKnown RBP32.67■■■□□ 2.82
CBX4-203ENST00000494546 TMPRSS15P98073 1019 aa32.67■■■□□ 2.82
CBX4-203ENST00000494546 PDE1BQ01064 536 aa32.67■■■□□ 2.82
CBX4-203ENST00000494546 P3H1Q32P28 736 aa32.67■■■□□ 2.82
CBX4-203ENST00000494546 NCSTNQ92542 709 aa32.67■■■□□ 2.82
CBX4-203ENST00000494546 TBC1D10AQ9BXI6 508 aa32.67■■■□□ 2.82
CBX4-203ENST00000494546 ASB8Q9H765 288 aa32.67■■■□□ 2.82
CBX4-203ENST00000494546 ARNT2Q9HBZ2 717 aa32.67■■■□□ 2.82
CBX4-203ENST00000494546 CPNE5Q9HCH3 593 aa32.67■■■□□ 2.82
CBX4-203ENST00000494546 LZTFL1Q9NQ48 299 aa32.67■■■□□ 2.82
CBX4-203ENST00000494546 FEZ2Q9UHY8 353 aaPredicted RBP32.67■■■□□ 2.82
CBX4-203ENST00000494546 NVLO15381 856 aaKnown RBP32.66■■■□□ 2.82
CBX4-203ENST00000494546 SRP72O76094 671 aaKnown RBP32.66■■■□□ 2.82
CBX4-203ENST00000494546 CCDC175P0C221 793 aa32.66■■■□□ 2.82
CBX4-203ENST00000494546 MSH3P20585 1137 aa32.66■■■□□ 2.82
CBX4-203ENST00000494546 EPHA4P54764 986 aa32.66■■■□□ 2.82
CBX4-203ENST00000494546 CLN3Q13286 438 aa32.66■■■□□ 2.82
CBX4-203ENST00000494546 RPS6KA1Q15418 735 aa32.66■■■□□ 2.82
CBX4-203ENST00000494546 SNAP47Q5SQN1 464 aa32.66■■■□□ 2.82
CBX4-203ENST00000494546 KCTD11Q693B1 232 aa32.66■■■□□ 2.82
CBX4-203ENST00000494546 TMEM220Q6QAJ8 160 aa32.66■■■□□ 2.82
CBX4-203ENST00000494546 AMZ2Q86W34 360 aa32.66■■■□□ 2.82
CBX4-203ENST00000494546 LRRC8AQ8IWT6 810 aa32.66■■■□□ 2.82
CBX4-203ENST00000494546 UBE2Q2Q8WVN8 375 aa32.66■■■□□ 2.82
CBX4-203ENST00000494546 LRRC40Q9H9A6 602 aa32.66■■■□□ 2.82
CBX4-203ENST00000494546 ZNF624Q9P2J8 865 aaPredicted RBP32.66■■■□□ 2.82
CBX4-203ENST00000494546 POP7O75817 140 aaKnown RBP32.65■■■□□ 2.82
CBX4-203ENST00000494546 CSTF2P33240 577 aaKnown RBP eCLIP32.65■■■□□ 2.823e-7■□□□□ 10.7
CBX4-203ENST00000494546 SLC19A1P41440 591 aa32.65■■■□□ 2.82
CBX4-203ENST00000494546 ABRAXAS1Q6UWZ7 409 aa32.65■■■□□ 2.82
CBX4-203ENST00000494546 DET1Q7L5Y6 550 aa32.65■■■□□ 2.82
CBX4-203ENST00000494546 GPR155Q7Z3F1 870 aa32.65■■■□□ 2.82
CBX4-203ENST00000494546 SLC13A5Q86YT5 568 aaPredicted RBP32.65■■■□□ 2.82
CBX4-203ENST00000494546 AGBL5Q8NDL9 886 aa32.65■■■□□ 2.82
CBX4-203ENST00000494546 ALS2CR12Q96Q35 445 aa32.65■■■□□ 2.82
CBX4-203ENST00000494546 A8MU76 341 aa32.64■■■□□ 2.82
CBX4-203ENST00000494546 BRAFP15056 766 aa32.64■■■□□ 2.82
CBX4-203ENST00000494546 ZNF140P52738 457 aaPredicted RBP32.64■■■□□ 2.82
CBX4-203ENST00000494546 LONRF2Q1L5Z9 754 aa32.64■■■□□ 2.82
CBX4-203ENST00000494546 MEI1Q5TIA1 1274 aa32.64■■■□□ 2.82
CBX4-203ENST00000494546 WDR74Q6RFH5 385 aaPredicted RBP32.64■■■□□ 2.82
CBX4-203ENST00000494546 FOXJ2Q9P0K8 574 aa32.64■■■□□ 2.82
CBX4-203ENST00000494546 LILRA5A6NI73 299 aa32.63■■■□□ 2.81
CBX4-203ENST00000494546 OR52A4PA6NMU1 304 aa32.63■■■□□ 2.81
CBX4-203ENST00000494546 C9orf172C9J069 976 aa32.63■■■□□ 2.81
CBX4-203ENST00000494546 LIASO43766 372 aa32.63■■■□□ 2.81
CBX4-203ENST00000494546 KCNJ13O60928 360 aa32.63■■■□□ 2.81
CBX4-203ENST00000494546 FGF3P11487 239 aaPredicted RBP32.63■■■□□ 2.81
CBX4-203ENST00000494546 TPH1P17752 444 aa32.63■■■□□ 2.81
CBX4-203ENST00000494546 PBLDP30039 288 aaPredicted RBP32.63■■■□□ 2.81
CBX4-203ENST00000494546 XIAPP98170 497 aa32.63■■■□□ 2.81
CBX4-203ENST00000494546 FNBP1LQ5T0N5 605 aa32.63■■■□□ 2.81
CBX4-203ENST00000494546 TMEM164Q5U3C3 297 aa32.63■■■□□ 2.81
CBX4-203ENST00000494546 AGAP9Q5VTM2 703 aa32.63■■■□□ 2.81
CBX4-203ENST00000494546 WASH2PQ6VEQ5 465 aa32.63■■■□□ 2.81
CBX4-203ENST00000494546 TMEM26Q6ZUK4 368 aa32.63■■■□□ 2.81
CBX4-203ENST00000494546 C1orf54Q8WWF1 131 aa32.63■■■□□ 2.81
CBX4-203ENST00000494546 CXorf40BQ96DE9 158 aa32.63■■■□□ 2.81
CBX4-203ENST00000494546 WASH6PQ9NQA3 447 aa32.63■■■□□ 2.81
CBX4-203ENST00000494546 CRLS1Q9UJA2 301 aa32.63■■■□□ 2.81
CBX4-203ENST00000494546 ACSL6Q9UKU0 697 aa32.63■■■□□ 2.81
CBX4-203ENST00000494546 WDR37Q9Y2I8 494 aa32.63■■■□□ 2.81
CBX4-203ENST00000494546 CCL22O00626 93 aa32.62■■■□□ 2.81
CBX4-203ENST00000494546 PSMD3O43242 534 aa32.62■■■□□ 2.81
CBX4-203ENST00000494546 LDB2O43679 373 aa32.62■■■□□ 2.81
CBX4-203ENST00000494546 HADHAP40939 763 aa32.62■■■□□ 2.81
CBX4-203ENST00000494546 SOWAHCQ53LP3 525 aaPredicted RBP32.62■■■□□ 2.81
CBX4-203ENST00000494546 ARHGAP40Q5TG30 622 aa32.62■■■□□ 2.81
CBX4-203ENST00000494546 BEND7Q8N7W2 519 aaPredicted RBP32.62■■■□□ 2.81
CBX4-203ENST00000494546 SGF29Q96ES7 293 aa32.62■■■□□ 2.81
CBX4-203ENST00000494546 FRMD8P1Q9BZ68 369 aaPredicted RBP32.62■■■□□ 2.81
CBX4-203ENST00000494546 EPB41L1Q9H4G0 881 aa32.62■■■□□ 2.81
CBX4-203ENST00000494546 FAM96AQ9H5X1 160 aa32.62■■■□□ 2.81
CBX4-203ENST00000494546 UCK1Q9HA47 277 aa32.62■■■□□ 2.81
CBX4-203ENST00000494546 PIH1D1Q9NWS0 290 aaKnown RBP32.62■■■□□ 2.81
CBX4-203ENST00000494546 PDP2Q9P2J9 529 aa32.62■■■□□ 2.81
CBX4-203ENST00000494546 KLHL3Q9UH77 587 aa32.62■■■□□ 2.81
CBX4-203ENST00000494546 DNMT3AQ9Y6K1 912 aaPredicted RBP32.62■■■□□ 2.81
CBX4-203ENST00000494546 PTPRQQ9UMZ3 2332 aa32.62■■■□□ 2.81
CBX4-203ENST00000494546 AP2A1O95782 977 aa32.61■■■□□ 2.81
CBX4-203ENST00000494546 STIP1P31948 543 aaKnown RBP32.61■■■□□ 2.81
CBX4-203ENST00000494546 HALP42357 657 aa32.61■■■□□ 2.81
CBX4-203ENST00000494546 SEPT6Q14141 434 aa32.61■■■□□ 2.81
CBX4-203ENST00000494546 CLCA4Q14CN2 919 aa32.61■■■□□ 2.81
CBX4-203ENST00000494546 TGIF1Q15583 401 aa32.61■■■□□ 2.81
CBX4-203ENST00000494546 OASLQ15646 514 aaKnown RBP32.61■■■□□ 2.81
CBX4-203ENST00000494546 ZFAND4Q86XD8 727 aa32.61■■■□□ 2.81
CBX4-203ENST00000494546 FAM129CQ86XR2 697 aa32.61■■■□□ 2.81
CBX4-203ENST00000494546 NAT14Q8WUY8 206 aa32.61■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms