RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 LDB2O43679 373 aa12.4□□□□□ -0.42
HSPG2-212ENST00000493940 ANXA9O76027 345 aa12.4□□□□□ -0.42
HSPG2-212ENST00000493940 JMJD7P0C870 316 aa12.4□□□□□ -0.42
HSPG2-212ENST00000493940 PLA2G2AP14555 144 aa12.4□□□□□ -0.42
HSPG2-212ENST00000493940 ETS1P14921 441 aa12.4□□□□□ -0.42
HSPG2-212ENST00000493940 ZNF140P52738 457 aaPredicted RBP12.4□□□□□ -0.42
HSPG2-212ENST00000493940 TMPRSS15P98073 1019 aa12.4□□□□□ -0.42
HSPG2-212ENST00000493940 EIF3IQ13347 325 aaKnown RBP12.4□□□□□ -0.42
HSPG2-212ENST00000493940 TAF1AQ15573 450 aaPredicted RBP12.4□□□□□ -0.42
HSPG2-212ENST00000493940 INSCQ1MX18 579 aa12.4□□□□□ -0.42
HSPG2-212ENST00000493940 SNAP47Q5SQN1 464 aa12.4□□□□□ -0.42
HSPG2-212ENST00000493940 KIAA1614Q5VZ46 1190 aa12.4□□□□□ -0.42
HSPG2-212ENST00000493940 ABRAXAS1Q6UWZ7 409 aa12.4□□□□□ -0.42
HSPG2-212ENST00000493940 GPR155Q7Z3F1 870 aa12.4□□□□□ -0.42
HSPG2-212ENST00000493940 ARHGAP22Q7Z5H3 698 aa12.4□□□□□ -0.42
HSPG2-212ENST00000493940 DTX1Q86Y01 620 aa12.4□□□□□ -0.42
HSPG2-212ENST00000493940 BMPERQ8N8U9 685 aa12.4□□□□□ -0.42
HSPG2-212ENST00000493940 GLIS1Q8NBF1 620 aa12.4□□□□□ -0.42
HSPG2-212ENST00000493940 GDAP1Q8TB36 358 aa12.4□□□□□ -0.42
HSPG2-212ENST00000493940 ZNF398Q8TD17 642 aa12.4□□□□□ -0.42
HSPG2-212ENST00000493940 DTX3LQ8TDB6 740 aa12.4□□□□□ -0.42
HSPG2-212ENST00000493940 JPH3Q8WXH2 748 aaPredicted RBP12.4□□□□□ -0.42
HSPG2-212ENST00000493940 NCSTNQ92542 709 aa12.4□□□□□ -0.42
HSPG2-212ENST00000493940 SGF29Q96ES7 293 aa12.4□□□□□ -0.42
HSPG2-212ENST00000493940 TIMM29Q9BSF4 260 aa12.4□□□□□ -0.42
HSPG2-212ENST00000493940 ANP32EQ9BTT0 268 aa12.4□□□□□ -0.42
HSPG2-212ENST00000493940 ARNT2Q9HBZ2 717 aa12.4□□□□□ -0.42
HSPG2-212ENST00000493940 RAD18Q9NS91 495 aa12.4□□□□□ -0.42
HSPG2-212ENST00000493940 HACD3Q9P035 362 aa12.4□□□□□ -0.42
HSPG2-212ENST00000493940 ACSL6Q9UKU0 697 aa12.4□□□□□ -0.42
HSPG2-212ENST00000493940 GUCA1BQ9UMX6 200 aa12.4□□□□□ -0.42
HSPG2-212ENST00000493940 B3GALT1Q9Y5Z6 326 aa12.4□□□□□ -0.42
HSPG2-212ENST00000493940 SEC16AO15027 2179 aa12.39□□□□□ -0.43
HSPG2-212ENST00000493940 AGAP14A8MT82 685 aa12.39□□□□□ -0.43
HSPG2-212ENST00000493940 STX7O15400 261 aaKnown RBP12.39□□□□□ -0.43
HSPG2-212ENST00000493940 POP7O75817 140 aaKnown RBP12.39□□□□□ -0.43
HSPG2-212ENST00000493940 TYRP1P17643 537 aa12.39□□□□□ -0.43
HSPG2-212ENST00000493940 LPOP22079 712 aaPredicted RBP12.39□□□□□ -0.43
HSPG2-212ENST00000493940 MLLT3P42568 568 aaPredicted RBP12.39□□□□□ -0.43
HSPG2-212ENST00000493940 MAPK9P45984 424 aa12.39□□□□□ -0.43
HSPG2-212ENST00000493940 GFERP55789 205 aa12.39□□□□□ -0.43
HSPG2-212ENST00000493940 PPP1CAP62136 330 aa12.39□□□□□ -0.43
HSPG2-212ENST00000493940 BIRC2Q13490 618 aa12.39□□□□□ -0.43
HSPG2-212ENST00000493940 NFE2L1Q14494 772 aa12.39□□□□□ -0.43
HSPG2-212ENST00000493940 SIX1Q15475 284 aaPredicted RBP12.39□□□□□ -0.43
HSPG2-212ENST00000493940 ITPRIPL1Q6GPH6 555 aa12.39□□□□□ -0.43
HSPG2-212ENST00000493940 TMEM220Q6QAJ8 160 aa12.39□□□□□ -0.43
HSPG2-212ENST00000493940 DET1Q7L5Y6 550 aa12.39□□□□□ -0.43
HSPG2-212ENST00000493940 ZNF605Q86T29 641 aa12.39□□□□□ -0.43
HSPG2-212ENST00000493940 VASH2Q86V25 355 aa12.39□□□□□ -0.43
HSPG2-212ENST00000493940 TRAPPC5Q8IUR0 188 aa12.39□□□□□ -0.43
HSPG2-212ENST00000493940 ZNF843Q8N446 348 aa12.39□□□□□ -0.43
HSPG2-212ENST00000493940 DDHD1Q8NEL9 900 aa12.39□□□□□ -0.43
HSPG2-212ENST00000493940 GPR150Q8NGU9 434 aa12.39□□□□□ -0.43
HSPG2-212ENST00000493940 BRSK1Q8TDC3 778 aa12.39□□□□□ -0.43
HSPG2-212ENST00000493940 SNRNP27Q8WVK2 155 aaKnown RBP12.39□□□□□ -0.43
HSPG2-212ENST00000493940 ART4Q93070 314 aa12.39□□□□□ -0.43
HSPG2-212ENST00000493940 SRPK1Q96SB4 655 aaKnown RBP12.39□□□□□ -0.43
HSPG2-212ENST00000493940 NRTNQ99748 197 aa12.39□□□□□ -0.43
HSPG2-212ENST00000493940 CMKLR1Q99788 373 aa12.39□□□□□ -0.43
HSPG2-212ENST00000493940 TBL1YQ9BQ87 522 aa12.39□□□□□ -0.43
HSPG2-212ENST00000493940 FSD1LQ9BXM9 530 aa12.39□□□□□ -0.43
HSPG2-212ENST00000493940 SPRY4Q9C004 299 aa12.39□□□□□ -0.43
HSPG2-212ENST00000493940 SEMA4CQ9C0C4 833 aa12.39□□□□□ -0.43
HSPG2-212ENST00000493940 APMAPQ9HDC9 416 aa12.39□□□□□ -0.43
HSPG2-212ENST00000493940 KLHL3Q9UH77 587 aa12.39□□□□□ -0.43
HSPG2-212ENST00000493940 PSMD13Q9UNM6 376 aa12.39□□□□□ -0.43
HSPG2-212ENST00000493940 AAR2Q9Y312 384 aaKnown RBP12.39□□□□□ -0.43
HSPG2-212ENST00000493940 TENM4Q6N022 2769 aa12.38□□□□□ -0.43
HSPG2-212ENST00000493940 ZNF462Q96JM2 2506 aa12.38□□□□□ -0.43
HSPG2-212ENST00000493940 FER1L5A0AVI2 2057 aa12.38□□□□□ -0.43
HSPG2-212ENST00000493940 KIR2DS5A0A0G2JLQ3 304 aa12.38□□□□□ -0.43
HSPG2-212ENST00000493940 A0A0G2JNG1 304 aa12.38□□□□□ -0.43
HSPG2-212ENST00000493940 MIF4GDA9UHW6 222 aaKnown RBP12.38□□□□□ -0.43
HSPG2-212ENST00000493940 GPR89AB7ZAQ6 455 aa12.38□□□□□ -0.43
HSPG2-212ENST00000493940 K7ENP7 123 aa12.38□□□□□ -0.43
HSPG2-212ENST00000493940 KIR2DS3K7RE56 304 aa12.38□□□□□ -0.43
HSPG2-212ENST00000493940 HGSO14964 777 aaPredicted RBP12.38□□□□□ -0.43
HSPG2-212ENST00000493940 KIF1CO43896 1103 aaKnown RBP12.38□□□□□ -0.43
HSPG2-212ENST00000493940 SRP72O76094 671 aaKnown RBP12.38□□□□□ -0.43
HSPG2-212ENST00000493940 PRAMEF1O95521 474 aa12.38□□□□□ -0.43
HSPG2-212ENST00000493940 GPR89BP0CG08 455 aa12.38□□□□□ -0.43
HSPG2-212ENST00000493940 GRIA1P42261 906 aa12.38□□□□□ -0.43
HSPG2-212ENST00000493940 LEPRP48357 1165 aaKnown RBP12.38□□□□□ -0.43
HSPG2-212ENST00000493940 TMPRSS3P57727 454 aa12.38□□□□□ -0.43
HSPG2-212ENST00000493940 GPLD1P80108 840 aa12.38□□□□□ -0.43
HSPG2-212ENST00000493940 CCZ1BP86790 482 aa12.38□□□□□ -0.43
HSPG2-212ENST00000493940 CCZ1P86791 482 aaPredicted RBP12.38□□□□□ -0.43
HSPG2-212ENST00000493940 VAC14Q08AM6 782 aa12.38□□□□□ -0.43
HSPG2-212ENST00000493940 KIR2DS5Q14953 304 aa12.38□□□□□ -0.43
HSPG2-212ENST00000493940 OASLQ15646 514 aaKnown RBP12.38□□□□□ -0.43
HSPG2-212ENST00000493940 PARP6Q2NL67 630 aa12.38□□□□□ -0.43
HSPG2-212ENST00000493940 INO80CQ6PI98 192 aaPredicted RBP12.38□□□□□ -0.43
HSPG2-212ENST00000493940 WDR74Q6RFH5 385 aaPredicted RBP12.38□□□□□ -0.43
HSPG2-212ENST00000493940 TMEM26Q6ZUK4 368 aa12.38□□□□□ -0.43
HSPG2-212ENST00000493940 SLC9B2Q86UD5 537 aa12.38□□□□□ -0.43
HSPG2-212ENST00000493940 SYCE1Q8N0S2 351 aa12.38□□□□□ -0.43
HSPG2-212ENST00000493940 UBL4BQ8N7F7 174 aa12.38□□□□□ -0.43
HSPG2-212ENST00000493940 SPDYE1Q8NFV5 336 aaPredicted RBP12.38□□□□□ -0.43
HSPG2-212ENST00000493940 C1orf54Q8WWF1 131 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms