RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 NUDT4Q9NZJ9 180 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 NFKBIL1Q9UBC1 381 aaPredicted RBP13.88□□□□□ -0.19
PTPN7-216ENST00000492977 BAIAP2L1Q9UHR4 511 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 CDH7Q9ULB5 785 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 PCDHGA4Q9Y5G9 962 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 SNX2O60749 519 aa13.87□□□□□ -0.19
PTPN7-216ENST00000492977 CDK14O94921 469 aa13.87□□□□□ -0.19
PTPN7-216ENST00000492977 TRIM16O95361 564 aa13.87□□□□□ -0.19
PTPN7-216ENST00000492977 PRNPP04156 253 aa13.87□□□□□ -0.19
PTPN7-216ENST00000492977 CBSLP0DN79 551 aa13.87□□□□□ -0.19
PTPN7-216ENST00000492977 FCARP24071 287 aa13.87□□□□□ -0.19
PTPN7-216ENST00000492977 CBSP35520 551 aa13.87□□□□□ -0.19
PTPN7-216ENST00000492977 CDH13P55290 713 aa13.87□□□□□ -0.19
PTPN7-216ENST00000492977 SH3BP2P78314 561 aa13.87□□□□□ -0.19
PTPN7-216ENST00000492977 CLCQ05315 142 aa13.87□□□□□ -0.19
PTPN7-216ENST00000492977 LCP2Q13094 533 aa13.87□□□□□ -0.19
PTPN7-216ENST00000492977 WASHC2DQ5SRD0 308 aa13.87□□□□□ -0.19
PTPN7-216ENST00000492977 RFLNAQ6ZTI6 216 aa13.87□□□□□ -0.19
PTPN7-216ENST00000492977 DPPA4Q7L190 304 aa13.87□□□□□ -0.19
PTPN7-216ENST00000492977 MYO1HQ8N1T3 1032 aa13.87□□□□□ -0.19
PTPN7-216ENST00000492977 ZBTB2Q8N680 514 aa13.87□□□□□ -0.19
PTPN7-216ENST00000492977 NXPE3Q969Y0 559 aa13.87□□□□□ -0.19
PTPN7-216ENST00000492977 FAM83DQ9H4H8 585 aa13.87□□□□□ -0.19
PTPN7-216ENST00000492977 HPS4Q9NQG7 708 aa13.87□□□□□ -0.19
PTPN7-216ENST00000492977 SMOXQ9NWM0 555 aa13.87□□□□□ -0.19
PTPN7-216ENST00000492977 CD274Q9NZQ7 290 aa13.87□□□□□ -0.19
PTPN7-216ENST00000492977 PLXNB3Q9ULL4 1909 aa13.87□□□□□ -0.19
PTPN7-216ENST00000492977 LAMA2P24043 3122 aaKnown RBP13.87□□□□□ -0.19
PTPN7-216ENST00000492977 EDDM13A0A1B0GTR0 161 aa13.86□□□□□ -0.19
PTPN7-216ENST00000492977 OTOL1A6NHN0 477 aaPredicted RBP13.86□□□□□ -0.19
PTPN7-216ENST00000492977 C16orf96A6NNT2 1141 aa13.86□□□□□ -0.19
PTPN7-216ENST00000492977 PRRT4C9JH25 899 aa13.86□□□□□ -0.19
PTPN7-216ENST00000492977 MLYCDO95822 493 aa13.86□□□□□ -0.19
PTPN7-216ENST00000492977 THRAP10827 490 aa13.86□□□□□ -0.19
PTPN7-216ENST00000492977 COX4I1P13073 169 aa13.86□□□□□ -0.19
PTPN7-216ENST00000492977 EZRP15311 586 aaKnown RBP13.86□□□□□ -0.19
PTPN7-216ENST00000492977 PGM1P36871 562 aa13.86□□□□□ -0.19
PTPN7-216ENST00000492977 HK3P52790 923 aa13.86□□□□□ -0.19
PTPN7-216ENST00000492977 MXRA7P84157 204 aa13.86□□□□□ -0.19
PTPN7-216ENST00000492977 FCHO2Q0JRZ9 810 aa13.86□□□□□ -0.19
PTPN7-216ENST00000492977 TGFBIQ15582 683 aa13.86□□□□□ -0.19
PTPN7-216ENST00000492977 HNRNPA1L2Q32P51 320 aaKnown RBP13.86□□□□□ -0.19
PTPN7-216ENST00000492977 TTLL9Q3SXZ7 439 aa13.86□□□□□ -0.19
PTPN7-216ENST00000492977 UGT3A2Q3SY77 523 aa13.86□□□□□ -0.19
PTPN7-216ENST00000492977 FNDC3BQ53EP0 1204 aaKnown RBP13.86□□□□□ -0.19
PTPN7-216ENST00000492977 LRRC73Q5JTD7 316 aa13.86□□□□□ -0.19
PTPN7-216ENST00000492977 TANGO2Q6ICL3 276 aa13.86□□□□□ -0.19
PTPN7-216ENST00000492977 ANKRD54Q6NXT1 300 aa13.86□□□□□ -0.19
PTPN7-216ENST00000492977 ERAP2Q6P179 960 aa13.86□□□□□ -0.19
PTPN7-216ENST00000492977 SYCE2Q6PIF2 218 aa13.86□□□□□ -0.19
PTPN7-216ENST00000492977 RAVER1Q8IY67 606 aaKnown RBP13.86□□□□□ -0.19
PTPN7-216ENST00000492977 CPA6Q8N4T0 437 aa13.86□□□□□ -0.19
PTPN7-216ENST00000492977 TMIEQ8NEW7 156 aa13.86□□□□□ -0.19
PTPN7-216ENST00000492977 MAGEC3Q8TD91 643 aa13.86□□□□□ -0.19
PTPN7-216ENST00000492977 ZNF483Q8TF39 744 aaPredicted RBP13.86□□□□□ -0.19
PTPN7-216ENST00000492977 APOL5Q9BWW9 433 aa13.86□□□□□ -0.19
PTPN7-216ENST00000492977 SPATA16Q9BXB7 569 aa13.86□□□□□ -0.19
PTPN7-216ENST00000492977 MTG2Q9H4K7 406 aa13.86□□□□□ -0.19
PTPN7-216ENST00000492977 MID1IP1Q9NPA3 183 aa13.86□□□□□ -0.19
PTPN7-216ENST00000492977 KCTD5Q9NXV2 234 aa13.86□□□□□ -0.19
PTPN7-216ENST00000492977 FIS1Q9Y3D6 152 aa13.86□□□□□ -0.19
PTPN7-216ENST00000492977 TNPO3Q9Y5L0 923 aaKnown RBP13.86□□□□□ -0.19
PTPN7-216ENST00000492977 CHD7Q9P2D1 2997 aa13.86□□□□□ -0.19
PTPN7-216ENST00000492977 KIF26AQ9ULI4 1882 aaPredicted RBP13.86□□□□□ -0.19
PTPN7-216ENST00000492977 LRRC14BA6NHZ5 514 aa13.85□□□□□ -0.19
PTPN7-216ENST00000492977 A8MUI8 341 aa13.85□□□□□ -0.19
PTPN7-216ENST00000492977 EIF3FO00303 357 aaPredicted RBP13.85□□□□□ -0.19
PTPN7-216ENST00000492977 AZIN1O14977 448 aa13.85□□□□□ -0.19
PTPN7-216ENST00000492977 RAD51BO15315 384 aa13.85□□□□□ -0.19
PTPN7-216ENST00000492977 SKAP2O75563 359 aaPredicted RBP13.85□□□□□ -0.19
PTPN7-216ENST00000492977 S100BP04271 92 aaPredicted RBP13.85□□□□□ -0.19
PTPN7-216ENST00000492977 OR56A5P0C7T3 313 aa13.85□□□□□ -0.19
PTPN7-216ENST00000492977 TSPAN8P19075 237 aa13.85□□□□□ -0.19
PTPN7-216ENST00000492977 CPOXP36551 454 aa13.85□□□□□ -0.19
PTPN7-216ENST00000492977 RAP1GDS1P52306 607 aa13.85□□□□□ -0.19
PTPN7-216ENST00000492977 HYAL1Q12794 435 aa13.85□□□□□ -0.19
PTPN7-216ENST00000492977 HERC3Q15034 1050 aa13.85□□□□□ -0.19
PTPN7-216ENST00000492977 SBSNQ6UWP8 590 aa13.85□□□□□ -0.19
PTPN7-216ENST00000492977 VITQ6UXI7 678 aa13.85□□□□□ -0.19
PTPN7-216ENST00000492977 CHSY3Q70JA7 882 aa13.85□□□□□ -0.19
PTPN7-216ENST00000492977 FRA10AC1Q70Z53 315 aa13.85□□□□□ -0.19
PTPN7-216ENST00000492977 HSD11B1LQ7Z5J1 315 aa13.85□□□□□ -0.19
PTPN7-216ENST00000492977 PELI3Q8N2H9 469 aa13.85□□□□□ -0.19
PTPN7-216ENST00000492977 POU5F2Q8N7G0 328 aa13.85□□□□□ -0.19
PTPN7-216ENST00000492977 RP9Q8TA86 221 aaKnown RBP13.85□□□□□ -0.19
PTPN7-216ENST00000492977 LKAAEAR1Q8TD35 194 aa13.85□□□□□ -0.19
PTPN7-216ENST00000492977 TRPC4APQ8TEL6 797 aa13.85□□□□□ -0.19
PTPN7-216ENST00000492977 UCMAQ8WVF2 138 aa13.85□□□□□ -0.19
PTPN7-216ENST00000492977 TIFAQ96CG3 184 aa13.85□□□□□ -0.19
PTPN7-216ENST00000492977 NSUN5Q96P11 429 aaKnown RBP13.85□□□□□ -0.19
PTPN7-216ENST00000492977 LENG8Q96PV6 779 aaPredicted RBP13.85□□□□□ -0.19
PTPN7-216ENST00000492977 FAM126AQ9BYI3 521 aaPredicted RBP13.85□□□□□ -0.19
PTPN7-216ENST00000492977 NSUN3Q9H649 340 aaKnown RBP13.85□□□□□ -0.19
PTPN7-216ENST00000492977 PCTPQ9UKL6 214 aa13.85□□□□□ -0.19
PTPN7-216ENST00000492977 PIKFYVEQ9Y2I7 2098 aa13.85□□□□□ -0.19
PTPN7-216ENST00000492977 NCF1BA6NI72 391 aaPredicted RBP13.84□□□□□ -0.19
PTPN7-216ENST00000492977 NCF1CA8MVU1 366 aaPredicted RBP13.84□□□□□ -0.19
PTPN7-216ENST00000492977 PSMD11O00231 422 aa13.84□□□□□ -0.19
PTPN7-216ENST00000492977 ATP1B2P14415 290 aaPredicted RBP13.84□□□□□ -0.19
PTPN7-216ENST00000492977 NCF1P14598 390 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms