RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, human

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCM2-217	ENST00000492883	IDS	P22304	550 aa		13.75	□□□□□ -0.21
CCM2-217	ENST00000492883	PML	P29590	882 aa		13.75	□□□□□ -0.21
CCM2-217	ENST00000492883	NSG1	P42857	185 aa		13.75	□□□□□ -0.21
CCM2-217	ENST00000492883	MAGEA3	P43357	314 aa		13.75	□□□□□ -0.21
CCM2-217	ENST00000492883	RPL21	P46778	160 aa	Known RBP	13.75	□□□□□ -0.21
CCM2-217	ENST00000492883	CLCNKA	P51800	687 aa		13.75	□□□□□ -0.21
CCM2-217	ENST00000492883	MAZ	P56270	477 aa	Known RBP	13.75	□□□□□ -0.21
CCM2-217	ENST00000492883	HLTF	Q14527	1009 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
CCM2-217	ENST00000492883	ITIH4	Q14624	930 aa		13.75	□□□□□ -0.21
CCM2-217	ENST00000492883	BBS9	Q3SYG4	887 aa		13.75	□□□□□ -0.21
CCM2-217	ENST00000492883	ANKRD20A4	Q4UJ75	823 aa		13.75	□□□□□ -0.21
CCM2-217	ENST00000492883	BCL7A	Q4VC05	210 aa		13.75	□□□□□ -0.21
CCM2-217	ENST00000492883	AARS2	Q5JTZ9	985 aa	Known RBP	13.75	□□□□□ -0.21
CCM2-217	ENST00000492883	NAGS	Q8N159	534 aa		13.75	□□□□□ -0.21
CCM2-217	ENST00000492883	ARL14	Q8N4G2	192 aa		13.75	□□□□□ -0.21
CCM2-217	ENST00000492883	MAPK15	Q8TD08	544 aa		13.75	□□□□□ -0.21
CCM2-217	ENST00000492883	PATE1	Q8WXA2	126 aa		13.75	□□□□□ -0.21
CCM2-217	ENST00000492883	ZNF669	Q96BR6	464 aa	Predicted RBP	13.75	□□□□□ -0.21
CCM2-217	ENST00000492883	STAMBPL1	Q96FJ0	436 aa		13.75	□□□□□ -0.21
CCM2-217	ENST00000492883	SIGLEC10	Q96LC7	697 aa		13.75	□□□□□ -0.21
CCM2-217	ENST00000492883	RAB17	Q9H0T7	212 aa		13.75	□□□□□ -0.21
CCM2-217	ENST00000492883	DPH5	Q9H2P9	285 aa		13.75	□□□□□ -0.21
CCM2-217	ENST00000492883	PRDM8	Q9NQV8	689 aa		13.75	□□□□□ -0.21
CCM2-217	ENST00000492883	LRIT1	Q9P2V4	623 aa		13.75	□□□□□ -0.21
CCM2-217	ENST00000492883	MRFAP1	Q9Y605	127 aa		13.75	□□□□□ -0.21
CCM2-217	ENST00000492883	RPS6KL1	Q9Y6S9	549 aa		13.75	□□□□□ -0.21
CCM2-217	ENST00000492883	TMEM131	Q92545	1883 aa		13.75	□□□□□ -0.21
CCM2-217	ENST00000492883	FRYL	O94915	3013 aa		13.74	□□□□□ -0.21
CCM2-217	ENST00000492883	IGLV3-16	A0A075B6K0	115 aa		13.74	□□□□□ -0.21
CCM2-217	ENST00000492883	MED19	A0JLT2	244 aa	Predicted RBP	13.74	□□□□□ -0.21
CCM2-217	ENST00000492883	MGAT4D	A6NG13	374 aa		13.74	□□□□□ -0.21
CCM2-217	ENST00000492883	OR5K4	A6NMS3	321 aa		13.74	□□□□□ -0.21
CCM2-217	ENST00000492883	RHPN2P1	A8MT19	583 aa		13.74	□□□□□ -0.21
CCM2-217	ENST00000492883	GOLGA8K	D6RF30	607 aa		13.74	□□□□□ -0.21
CCM2-217	ENST00000492883	GOLGA8T	H3BQL2	631 aa		13.74	□□□□□ -0.21
CCM2-217	ENST00000492883	DKK1	O94907	266 aa		13.74	□□□□□ -0.21
CCM2-217	ENST00000492883	EML2	O95834	649 aa		13.74	□□□□□ -0.21
CCM2-217	ENST00000492883	F3	P13726	295 aa		13.74	□□□□□ -0.21
CCM2-217	ENST00000492883	RPL10	P27635	214 aa	Known RBP	13.74	□□□□□ -0.21
CCM2-217	ENST00000492883	ARL4C	P56559	192 aa		13.74	□□□□□ -0.21
CCM2-217	ENST00000492883	DHX9	Q08211	1270 aa	Known RBP	13.74	□□□□□ -0.21
CCM2-217	ENST00000492883	CALCOCO2	Q13137	446 aa		13.74	□□□□□ -0.21
CCM2-217	ENST00000492883	SMAD1	Q15797	465 aa	Known RBP	13.74	□□□□□ -0.21
CCM2-217	ENST00000492883	SEPT7	Q16181	437 aa	Known RBP	13.74	□□□□□ -0.21
CCM2-217	ENST00000492883	PERM1	Q5SV97	790 aa		13.74	□□□□□ -0.21
CCM2-217	ENST00000492883	KIAA0930	Q6ICG6	404 aa	Predicted RBP	13.74	□□□□□ -0.21
CCM2-217	ENST00000492883	IYD	Q6PHW0	289 aa		13.74	□□□□□ -0.21
CCM2-217	ENST00000492883	C11orf96	Q7Z7L8	435 aa		13.74	□□□□□ -0.21
CCM2-217	ENST00000492883	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	13.74	□□□□□ -0.21
CCM2-217	ENST00000492883	LDB1	Q86U70	411 aa	Predicted RBP	13.74	□□□□□ -0.21
CCM2-217	ENST00000492883	TMEM135	Q86UB9	458 aa		13.74	□□□□□ -0.21
CCM2-217	ENST00000492883	CLDN19	Q8N6F1	224 aa		13.74	□□□□□ -0.21
CCM2-217	ENST00000492883	CCDC74A	Q96AQ1	378 aa		13.74	□□□□□ -0.21
CCM2-217	ENST00000492883	CCDC97	Q96F63	343 aa	Predicted RBP	13.74	□□□□□ -0.21
CCM2-217	ENST00000492883	PWWP2A	Q96N64	755 aa		13.74	□□□□□ -0.21
CCM2-217	ENST00000492883	FCRL3	Q96P31	734 aa	Predicted RBP	13.74	□□□□□ -0.21
CCM2-217	ENST00000492883	CCDC3	Q9BQI4	270 aa		13.74	□□□□□ -0.21
CCM2-217	ENST00000492883	TRIM56	Q9BRZ2	755 aa	Known RBP	13.74	□□□□□ -0.21
CCM2-217	ENST00000492883	VPS37B	Q9H9H4	285 aa		13.74	□□□□□ -0.21
CCM2-217	ENST00000492883	FAM8A1	Q9UBU6	413 aa		13.74	□□□□□ -0.21
CCM2-217	ENST00000492883	RNF215	Q9Y6U7	377 aa		13.74	□□□□□ -0.21
CCM2-217	ENST00000492883	CTAGE15	A4D2H0	777 aa		13.73	□□□□□ -0.21
CCM2-217	ENST00000492883	KLHL33	A6NCF5	533 aa		13.73	□□□□□ -0.21
CCM2-217	ENST00000492883		F8W8V4	182 aa		13.73	□□□□□ -0.21
CCM2-217	ENST00000492883	QSOX1	O00391	747 aa		13.73	□□□□□ -0.21
CCM2-217	ENST00000492883	PFDN6	O15212	129 aa		13.73	□□□□□ -0.21
CCM2-217	ENST00000492883	SGTA	O43765	313 aa		13.73	□□□□□ -0.21
CCM2-217	ENST00000492883	NUDT21	O43809	227 aa	Known RBP	13.73	□□□□□ -0.21
CCM2-217	ENST00000492883	HYAL3	O43820	417 aa	Predicted RBP	13.73	□□□□□ -0.21
CCM2-217	ENST00000492883	OPA1	O60313	960 aa		13.73	□□□□□ -0.21
CCM2-217	ENST00000492883	OR1I1	O60431	355 aa		13.73	□□□□□ -0.21
CCM2-217	ENST00000492883	NDUFS3	O75489	264 aa		13.73	□□□□□ -0.21
CCM2-217	ENST00000492883	BANF1	O75531	89 aa		13.73	□□□□□ -0.21
CCM2-217	ENST00000492883	USP1	O94782	785 aa		13.73	□□□□□ -0.21
CCM2-217	ENST00000492883	AP2A2	O94973	939 aa		13.73	□□□□□ -0.21
CCM2-217	ENST00000492883	POLB	P06746	335 aa		13.73	□□□□□ -0.21
CCM2-217	ENST00000492883	OR56A5	P0C7T3	313 aa		13.73	□□□□□ -0.21
CCM2-217	ENST00000492883	CTAGE8	P0CG41	777 aa		13.73	□□□□□ -0.21
CCM2-217	ENST00000492883	PGAM1	P18669	254 aa		13.73	□□□□□ -0.21
CCM2-217	ENST00000492883	TTPA	P49638	278 aa		13.73	□□□□□ -0.21
CCM2-217	ENST00000492883	PRLHR	P49683	370 aa		13.73	□□□□□ -0.21
CCM2-217	ENST00000492883	DRG2	P55039	364 aa	Known RBP	13.73	□□□□□ -0.21
CCM2-217	ENST00000492883	DMPK	Q09013	629 aa		13.73	□□□□□ -0.21
CCM2-217	ENST00000492883	THOC5	Q13769	683 aa	Known RBP	13.73	□□□□□ -0.21
CCM2-217	ENST00000492883	NFE2L1	Q14494	772 aa		13.73	□□□□□ -0.21
CCM2-217	ENST00000492883	SEMA3A	Q14563	771 aa		13.73	□□□□□ -0.21
CCM2-217	ENST00000492883	HIF1A	Q16665	826 aa		13.73	□□□□□ -0.21
CCM2-217	ENST00000492883	MSS51	Q4VC12	460 aa		13.73	□□□□□ -0.21
CCM2-217	ENST00000492883	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	13.73	□□□□□ -0.21
CCM2-217	ENST00000492883	MRNIP	Q6NTE8	343 aa		13.73	□□□□□ -0.21
CCM2-217	ENST00000492883	C8orf74	Q6P047	294 aa		13.73	□□□□□ -0.21
CCM2-217	ENST00000492883	RAB44	Q7Z6P3	723 aa	Predicted RBP	13.73	□□□□□ -0.21
CCM2-217	ENST00000492883	SLC9B2	Q86UD5	537 aa		13.73	□□□□□ -0.21
CCM2-217	ENST00000492883	CTAGE6	Q86UF2	777 aa		13.73	□□□□□ -0.21
CCM2-217	ENST00000492883	C17orf82	Q86X59	251 aa	Predicted RBP	13.73	□□□□□ -0.21
CCM2-217	ENST00000492883	CTAGE4	Q8IX94	777 aa		13.73	□□□□□ -0.21
CCM2-217	ENST00000492883	CFAP206	Q8IYR0	622 aa		13.73	□□□□□ -0.21
CCM2-217	ENST00000492883	AGGF1	Q8N302	714 aa	eCLIP	13.73	□□□□□ -0.21
CCM2-217	ENST00000492883	SFRP1	Q8N474	314 aa		13.73	□□□□□ -0.21
CCM2-217	ENST00000492883		Q8N9G6	341 aa	Predicted RBP	13.73	□□□□□ -0.21

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