RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	SERTM1	A2A2V5	107 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	CCDC154	A6NI56	674 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	VGLL3	A8MV65	326 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833		H3BNC9	293 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	ZNF701	M0R085	212 aa	Predicted RBP	6.27	□□□□□ -1.41
FN1-223	ENST00000490833	UBXN8	O00124	270 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	BTN3A1	O00481	513 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	TRIM24	O15164	1050 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	GRM6	O15303	877 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	HTRA2	O43464	458 aa	Predicted RBP	6.27	□□□□□ -1.41
FN1-223	ENST00000490833	FZD6	O60353	706 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	UGDH	O60701	494 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	EED	O75530	441 aa	Known RBP	6.27	□□□□□ -1.41
FN1-223	ENST00000490833	TMCC1	O94876	653 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	CDK14	O94921	469 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	AP2A2	O94973	939 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	PGLS	O95336	258 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	OLFM2	O95897	454 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	TBX18	O95935	607 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	CLPTM1	O96005	669 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	GLUD1	P00367	558 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	LRG1	P02750	347 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	ADH1A	P07327	375 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	C8G	P07360	202 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	PDHA1	P08559	390 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	ANXA5	P08758	320 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	OR56A5	P0C7T3	313 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	EBLN1	P0CF75	366 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	CYP2A6	P11509	494 aa	Predicted RBP	6.27	□□□□□ -1.41
FN1-223	ENST00000490833	PRPS2	P11908	318 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	HGF	P14210	728 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	HMGA1	P17096	107 aa	Known RBP	6.27	□□□□□ -1.41
FN1-223	ENST00000490833	IL1RN	P18510	177 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	IBSP	P21815	317 aa	Predicted RBP	6.27	□□□□□ -1.41
FN1-223	ENST00000490833	GPX3	P22352	226 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	FSHR	P23945	695 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	HTR1E	P28566	365 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	EEF1D	P29692	281 aa	Known RBP	6.27	□□□□□ -1.41
FN1-223	ENST00000490833	FMO4	P31512	558 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	ARRB2	P32121	409 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	MC4R	P32245	332 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	ACVRL1	P37023	503 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	SPAM1	P38567	509 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	RECQL	P46063	649 aa	Predicted RBP	6.27	□□□□□ -1.41
FN1-223	ENST00000490833	PNLIPRP1	P54315	467 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	CDKN2D	P55273	166 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	AP1S2	P56377	157 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	SMAD3	P84022	425 aa	Known RBP	6.27	□□□□□ -1.41
FN1-223	ENST00000490833	ROR2	Q01974	943 aa	Known RBP	6.27	□□□□□ -1.41
FN1-223	ENST00000490833	CREB5	Q02930	508 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	SP140	Q13342	867 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	BIRC2	Q13490	618 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	MYBPC3	Q14896	1274 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	CYTH1	Q15438	398 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	ARHGAP15	Q53QZ3	475 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	RTP2	Q5QGT7	225 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	TCHHL1	Q5QJ38	904 aa	Predicted RBP	6.27	□□□□□ -1.41
FN1-223	ENST00000490833	NADSYN1	Q6IA69	706 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	LCN8	Q6JVE9	175 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	PPP4R4	Q6NUP7	873 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	SLC30A9	Q6PML9	568 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	PAQR3	Q6TCH7	311 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	MACC1	Q6ZN28	852 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	ZBTB49	Q6ZSB9	765 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	6.27	□□□□□ -1.41
FN1-223	ENST00000490833	PTRH1	Q86Y79	214 aa	Known RBP	6.27	□□□□□ -1.41
FN1-223	ENST00000490833	HID1	Q8IV36	788 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	MFSD6L	Q8IWD5	586 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	LINC00528	Q8N1L1	170 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	PGBD5	Q8N414	524 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	RYBP	Q8N488	228 aa	Predicted RBP	6.27	□□□□□ -1.41
FN1-223	ENST00000490833	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	6.27	□□□□□ -1.41
FN1-223	ENST00000490833	PCDH20	Q8N6Y1	951 aa	Known RBP	6.27	□□□□□ -1.41
FN1-223	ENST00000490833	NETO2	Q8NC67	525 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	PDPR	Q8NCN5	879 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	PHC3	Q8NDX5	983 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	LPCAT1	Q8NF37	534 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	OR8J3	Q8NGG0	315 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	GRIN3A	Q8TCU5	1115 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	AGR3	Q8TD06	166 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	DIS3L	Q8TF46	1054 aa	Known RBP	6.27	□□□□□ -1.41
FN1-223	ENST00000490833	PPP1R13L	Q8WUF5	828 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	OSCP1	Q8WVF1	389 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	NRG4	Q8WWG1	115 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	LINC01599	Q8WXQ3	324 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	FUBP1	Q96AE4	644 aa	Known RBP	6.27	□□□□□ -1.41
FN1-223	ENST00000490833	SDCCAG3	Q96C92	435 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	SGF29	Q96ES7	293 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	ASIC4	Q96FT7	647 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	CENPN	Q96H22	339 aa	Predicted RBP	6.27	□□□□□ -1.41
FN1-223	ENST00000490833	PRR11	Q96HE9	360 aa	Predicted RBP	6.27	□□□□□ -1.41
FN1-223	ENST00000490833	CLPTM1L	Q96KA5	538 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	PLEKHG4B	Q96PX9	1271 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	CDK15	Q96Q40	435 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	NDN	Q99608	321 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	NTMT1	Q9BV86	223 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	UGT2B28	Q9BY64	529 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	LRRC3	Q9BY71	257 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	ZNF696	Q9H7X3	374 aa		6.27	□□□□□ -1.41
FN1-223	ENST00000490833	RMND5A	Q9H871	391 aa		6.27	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms