RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 GPRC6AQ5T6X5 926 aa13.79□□□□□ -0.2
VTI1A-206ENST00000489142 PCSK4Q6UW60 755 aa13.79□□□□□ -0.2
VTI1A-206ENST00000489142 RANBP10Q6VN20 620 aa13.79□□□□□ -0.2
VTI1A-206ENST00000489142 CCDC81Q6ZN84 652 aa13.79□□□□□ -0.2
VTI1A-206ENST00000489142 TRIM48Q8IWZ4 208 aa13.79□□□□□ -0.2
VTI1A-206ENST00000489142 SYCE1Q8N0S2 351 aa13.79□□□□□ -0.2
VTI1A-206ENST00000489142 BEND7Q8N7W2 519 aaPredicted RBP13.79□□□□□ -0.2
VTI1A-206ENST00000489142 OR13C4Q8NGS5 318 aa13.79□□□□□ -0.2
VTI1A-206ENST00000489142 ATG4AQ8WYN0 398 aa13.79□□□□□ -0.2
VTI1A-206ENST00000489142 ART4Q93070 314 aa13.79□□□□□ -0.2
VTI1A-206ENST00000489142 TTC25Q96NG3 672 aa13.79□□□□□ -0.2
VTI1A-206ENST00000489142 TBL1YQ9BQ87 522 aa13.79□□□□□ -0.2
VTI1A-206ENST00000489142 TIMM29Q9BSF4 260 aa13.79□□□□□ -0.2
VTI1A-206ENST00000489142 PIH1D1Q9NWS0 290 aaKnown RBP13.79□□□□□ -0.2
VTI1A-206ENST00000489142 FAM8A1Q9UBU6 413 aa13.79□□□□□ -0.2
VTI1A-206ENST00000489142 WDR37Q9Y2I8 494 aa13.79□□□□□ -0.2
VTI1A-206ENST00000489142 SSUH2Q9Y2M2 353 aa13.79□□□□□ -0.2
VTI1A-206ENST00000489142 AAR2Q9Y312 384 aaKnown RBP13.79□□□□□ -0.2
VTI1A-206ENST00000489142 SLC30A1Q9Y6M5 507 aa13.79□□□□□ -0.2
VTI1A-206ENST00000489142 TEX51A0A1B0GUA7 166 aa13.78□□□□□ -0.2
VTI1A-206ENST00000489142 PRR19A6NJB7 356 aa13.78□□□□□ -0.2
VTI1A-206ENST00000489142 MIF4GDA9UHW6 222 aaKnown RBP13.78□□□□□ -0.2
VTI1A-206ENST00000489142 ATXN7O15265 892 aaPredicted RBP13.78□□□□□ -0.2
VTI1A-206ENST00000489142 METTL18O95568 372 aa13.78□□□□□ -0.2
VTI1A-206ENST00000489142 VIPP01282 170 aa13.78□□□□□ -0.2
VTI1A-206ENST00000489142 LIPCP11150 499 aa13.78□□□□□ -0.2
VTI1A-206ENST00000489142 LPOP22079 712 aaPredicted RBP13.78□□□□□ -0.2
VTI1A-206ENST00000489142 AKT1P31749 480 aa13.78□□□□□ -0.2
VTI1A-206ENST00000489142 CSTF2P33240 577 aaKnown RBP eCLIP13.78□□□□□ -0.2
VTI1A-206ENST00000489142 SLC19A1P41440 591 aa13.78□□□□□ -0.2
VTI1A-206ENST00000489142 CLCNKAP51800 687 aa13.78□□□□□ -0.2
VTI1A-206ENST00000489142 GFERP55789 205 aa13.78□□□□□ -0.2
VTI1A-206ENST00000489142 KLF1Q13351 362 aaPredicted RBP13.78□□□□□ -0.2
VTI1A-206ENST00000489142 SQSTM1Q13501 440 aa13.78□□□□□ -0.2
VTI1A-206ENST00000489142 CLCA4Q14CN2 919 aa13.78□□□□□ -0.2
VTI1A-206ENST00000489142 TAF1AQ15573 450 aaPredicted RBP13.78□□□□□ -0.2
VTI1A-206ENST00000489142 CLPPQ16740 277 aaPredicted RBP13.78□□□□□ -0.2
VTI1A-206ENST00000489142 ZDHHC20Q5W0Z9 365 aa13.78□□□□□ -0.2
VTI1A-206ENST00000489142 DENND5AQ6IQ26 1287 aa13.78□□□□□ -0.2
VTI1A-206ENST00000489142 TMEM220Q6QAJ8 160 aa13.78□□□□□ -0.2
VTI1A-206ENST00000489142 FAM83HQ6ZRV2 1179 aaPredicted RBP13.78□□□□□ -0.2
VTI1A-206ENST00000489142 ARHGEF18Q6ZSZ5 1173 aa13.78□□□□□ -0.2
VTI1A-206ENST00000489142 AGBL5Q8NDL9 886 aa13.78□□□□□ -0.2
VTI1A-206ENST00000489142 DDHD1Q8NEL9 900 aa13.78□□□□□ -0.2
VTI1A-206ENST00000489142 ZNF398Q8TD17 642 aa13.78□□□□□ -0.2
VTI1A-206ENST00000489142 SLC39A7Q92504 469 aa13.78□□□□□ -0.2
VTI1A-206ENST00000489142 SH3KBP1Q96B97 665 aa13.78□□□□□ -0.2
VTI1A-206ENST00000489142 HES6Q96HZ4 224 aa13.78□□□□□ -0.2
VTI1A-206ENST00000489142 CCNL2Q96S94 520 aaPredicted RBP13.78□□□□□ -0.2
VTI1A-206ENST00000489142 CTRCQ99895 268 aa13.78□□□□□ -0.2
VTI1A-206ENST00000489142 TMEM121Q9BTD3 319 aa13.78□□□□□ -0.2
VTI1A-206ENST00000489142 FAM96AQ9H5X1 160 aa13.78□□□□□ -0.2
VTI1A-206ENST00000489142 SLC39A1Q9NY26 324 aa13.78□□□□□ -0.2
VTI1A-206ENST00000489142 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.78□□□□□ -0.2
VTI1A-206ENST00000489142 OGFRQ9NZT2 677 aa13.78□□□□□ -0.2
VTI1A-206ENST00000489142 GUCA1BQ9UMX6 200 aa13.78□□□□□ -0.2
VTI1A-206ENST00000489142 PSMD13Q9UNM6 376 aa13.78□□□□□ -0.2
VTI1A-206ENST00000489142 B3GALT1Q9Y5Z6 326 aa13.78□□□□□ -0.2
VTI1A-206ENST00000489142 ATRXP46100 2492 aa13.78□□□□□ -0.2
VTI1A-206ENST00000489142 GOLGA6L9A6NEM1 432 aa13.77□□□□□ -0.21
VTI1A-206ENST00000489142 OR5K4A6NMS3 321 aa13.77□□□□□ -0.21
VTI1A-206ENST00000489142 C2orf81A6NN90 581 aa13.77□□□□□ -0.21
VTI1A-206ENST00000489142 K7ENP7 123 aa13.77□□□□□ -0.21
VTI1A-206ENST00000489142 POP7O75817 140 aaKnown RBP13.77□□□□□ -0.21
VTI1A-206ENST00000489142 TPH1P17752 444 aa13.77□□□□□ -0.21
VTI1A-206ENST00000489142 XRCC1P18887 633 aaPredicted RBP13.77□□□□□ -0.21
VTI1A-206ENST00000489142 IDSP22304 550 aa13.77□□□□□ -0.21
VTI1A-206ENST00000489142 EPHA4P54764 986 aa13.77□□□□□ -0.21
VTI1A-206ENST00000489142 MSLNQ13421 630 aaPredicted RBP13.77□□□□□ -0.21
VTI1A-206ENST00000489142 TRA2AQ13595 282 aaKnown RBP eCLIP13.77□□□□□ -0.21
VTI1A-206ENST00000489142 ITGA9Q13797 1035 aa13.77□□□□□ -0.21
VTI1A-206ENST00000489142 NFE2L1Q14494 772 aa13.77□□□□□ -0.21
VTI1A-206ENST00000489142 TAF1BQ53T94 588 aaPredicted RBP13.77□□□□□ -0.21
VTI1A-206ENST00000489142 LDLRAP1Q5SW96 308 aa13.77□□□□□ -0.21
VTI1A-206ENST00000489142 FNBP1LQ5T0N5 605 aa13.77□□□□□ -0.21
VTI1A-206ENST00000489142 ANKS6Q68DC2 871 aa13.77□□□□□ -0.21
VTI1A-206ENST00000489142 INO80CQ6PI98 192 aaPredicted RBP13.77□□□□□ -0.21
VTI1A-206ENST00000489142 WDR74Q6RFH5 385 aaPredicted RBP13.77□□□□□ -0.21
VTI1A-206ENST00000489142 TMEM26Q6ZUK4 368 aa13.77□□□□□ -0.21
VTI1A-206ENST00000489142 TXLNBQ8N3L3 684 aa13.77□□□□□ -0.21
VTI1A-206ENST00000489142 GPR150Q8NGU9 434 aa13.77□□□□□ -0.21
VTI1A-206ENST00000489142 BRSK1Q8TDC3 778 aa13.77□□□□□ -0.21
VTI1A-206ENST00000489142 SGF29Q96ES7 293 aa13.77□□□□□ -0.21
VTI1A-206ENST00000489142 TAAR9Q96RI9 348 aa13.77□□□□□ -0.21
VTI1A-206ENST00000489142 DPYSL5Q9BPU6 564 aa13.77□□□□□ -0.21
VTI1A-206ENST00000489142 ZCCHC2Q9C0B9 1178 aaKnown RBP13.77□□□□□ -0.21
VTI1A-206ENST00000489142 ASB8Q9H765 288 aa13.77□□□□□ -0.21
VTI1A-206ENST00000489142 ACSL6Q9UKU0 697 aa13.77□□□□□ -0.21
VTI1A-206ENST00000489142 CFAP20Q9Y6A4 193 aaKnown RBP13.77□□□□□ -0.21
VTI1A-206ENST00000489142 CCDC78A2IDD5 438 aa13.76□□□□□ -0.21
VTI1A-206ENST00000489142 C5orf60A6NFR6 353 aa13.76□□□□□ -0.21
VTI1A-206ENST00000489142 LILRA5A6NI73 299 aa13.76□□□□□ -0.21
VTI1A-206ENST00000489142 GOLGA6L6A8MZA4 724 aa13.76□□□□□ -0.21
VTI1A-206ENST00000489142 C1QL1O75973 258 aa13.76□□□□□ -0.21
VTI1A-206ENST00000489142 SRP72O76094 671 aaKnown RBP13.76□□□□□ -0.21
VTI1A-206ENST00000489142 UBXN7O94888 489 aa13.76□□□□□ -0.21
VTI1A-206ENST00000489142 VCLP18206 1134 aa13.76□□□□□ -0.21
VTI1A-206ENST00000489142 WT1P19544 449 aaPredicted RBP13.76□□□□□ -0.21
VTI1A-206ENST00000489142 MSH3P20585 1137 aa13.76□□□□□ -0.21
VTI1A-206ENST00000489142 ZNF140P52738 457 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms