RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 C6orf132Q5T0Z8 1188 aa10.89□□□□□ -0.67
UBE4B-210ENST00000488228 ARMC3Q5W041 872 aa10.89□□□□□ -0.67
UBE4B-210ENST00000488228 ZNF470Q6ECI4 717 aa10.89□□□□□ -0.67
UBE4B-210ENST00000488228 UNC5AQ6ZN44 842 aa10.89□□□□□ -0.67
UBE4B-210ENST00000488228 DBX2Q6ZNG2 339 aa10.89□□□□□ -0.67
UBE4B-210ENST00000488228 CAPN12Q6ZSI9 719 aa10.89□□□□□ -0.67
UBE4B-210ENST00000488228 C11orf96Q7Z7L8 435 aa10.89□□□□□ -0.67
UBE4B-210ENST00000488228 TMEM135Q86UB9 458 aa10.89□□□□□ -0.67
UBE4B-210ENST00000488228 CCDC25Q86WR0 208 aa10.89□□□□□ -0.67
UBE4B-210ENST00000488228 GKN2Q86XP6 184 aa10.89□□□□□ -0.67
UBE4B-210ENST00000488228 ZBED8Q8IZ13 594 aa10.89□□□□□ -0.67
UBE4B-210ENST00000488228 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.89□□□□□ -0.67
UBE4B-210ENST00000488228 FBXO36Q8NEA4 188 aa10.89□□□□□ -0.67
UBE4B-210ENST00000488228 GPBAR1Q8TDU6 330 aa10.89□□□□□ -0.67
UBE4B-210ENST00000488228 SEC14L1Q92503 715 aa10.89□□□□□ -0.67
UBE4B-210ENST00000488228 SGF29Q96ES7 293 aa10.89□□□□□ -0.67
UBE4B-210ENST00000488228 RHOXF2Q9BQY4 288 aa10.89□□□□□ -0.67
UBE4B-210ENST00000488228 GSDMCQ9BYG8 508 aa10.89□□□□□ -0.67
UBE4B-210ENST00000488228 OSGEPL1Q9H4B0 414 aa10.89□□□□□ -0.67
UBE4B-210ENST00000488228 EPB41L5Q9HCM4 733 aa10.89□□□□□ -0.67
UBE4B-210ENST00000488228 SAYSD1Q9NPB0 183 aa10.89□□□□□ -0.67
UBE4B-210ENST00000488228 ZDHHC18Q9NUE0 388 aa10.89□□□□□ -0.67
UBE4B-210ENST00000488228 TAAR2Q9P1P5 351 aa10.89□□□□□ -0.67
UBE4B-210ENST00000488228 SLC17A6Q9P2U8 582 aa10.89□□□□□ -0.67
UBE4B-210ENST00000488228 SLC23A2Q9UGH3 650 aa10.89□□□□□ -0.67
UBE4B-210ENST00000488228 ZC3H7BQ9UGR2 993 aaKnown RBP10.89□□□□□ -0.67
UBE4B-210ENST00000488228 GPR34Q9UPC5 381 aa10.89□□□□□ -0.67
UBE4B-210ENST00000488228 TEX264Q9Y6I9 313 aa10.89□□□□□ -0.67
UBE4B-210ENST00000488228 PRSS21Q9Y6M0 314 aa10.89□□□□□ -0.67
UBE4B-210ENST00000488228 CSNK1G3Q9Y6M4 447 aa10.89□□□□□ -0.67
UBE4B-210ENST00000488228 LY6G6EA0A0G2JKS1 128 aa10.88□□□□□ -0.67
UBE4B-210ENST00000488228 SPAARA0A1B0GVQ0 90 aa10.88□□□□□ -0.67
UBE4B-210ENST00000488228 NEMP2A6NFY4 417 aa10.88□□□□□ -0.67
UBE4B-210ENST00000488228 EML2O95834 649 aa10.88□□□□□ -0.67
UBE4B-210ENST00000488228 POLBP06746 335 aa10.88□□□□□ -0.67
UBE4B-210ENST00000488228 ALPPL2P10696 532 aa10.88□□□□□ -0.67
UBE4B-210ENST00000488228 RALBP11234 206 aa10.88□□□□□ -0.67
UBE4B-210ENST00000488228 ZNF7P17097 686 aaPredicted RBP10.88□□□□□ -0.67
UBE4B-210ENST00000488228 SLC1A2P43004 574 aa10.88□□□□□ -0.67
UBE4B-210ENST00000488228 PRLHRP49683 370 aa10.88□□□□□ -0.67
UBE4B-210ENST00000488228 DNAJC3Q13217 504 aa10.88□□□□□ -0.67
UBE4B-210ENST00000488228 ITIH4Q14624 930 aa10.88□□□□□ -0.67
UBE4B-210ENST00000488228 SEPT7Q16181 437 aaKnown RBP10.88□□□□□ -0.67
UBE4B-210ENST00000488228 LONRF1Q17RB8 773 aa10.88□□□□□ -0.67
UBE4B-210ENST00000488228 PROX2Q3B8N5 592 aa10.88□□□□□ -0.67
UBE4B-210ENST00000488228 BCL7AQ4VC05 210 aa10.88□□□□□ -0.67
UBE4B-210ENST00000488228 AARS2Q5JTZ9 985 aaKnown RBP10.88□□□□□ -0.67
UBE4B-210ENST00000488228 SPANXN3Q5MJ09 141 aa10.88□□□□□ -0.67
UBE4B-210ENST00000488228 ZCCHC8Q6NZY4 707 aaKnown RBP10.88□□□□□ -0.67
UBE4B-210ENST00000488228 TRMT10BQ6PF06 316 aaKnown RBP10.88□□□□□ -0.67
UBE4B-210ENST00000488228 TMEM220Q6QAJ8 160 aa10.88□□□□□ -0.67
UBE4B-210ENST00000488228 PACS1Q6VY07 963 aa10.88□□□□□ -0.67
UBE4B-210ENST00000488228 FAM83HQ6ZRV2 1179 aaPredicted RBP10.88□□□□□ -0.67
UBE4B-210ENST00000488228 CENPUQ71F23 418 aa10.88□□□□□ -0.67
UBE4B-210ENST00000488228 SLC35F3Q8IY50 421 aa10.88□□□□□ -0.67
UBE4B-210ENST00000488228 FAM46DQ8NEK8 389 aa10.88□□□□□ -0.67
UBE4B-210ENST00000488228 LKAAEAR1Q8TD35 194 aa10.88□□□□□ -0.67
UBE4B-210ENST00000488228 PATE1Q8WXA2 126 aa10.88□□□□□ -0.67
UBE4B-210ENST00000488228 SGSM3Q96HU1 749 aa10.88□□□□□ -0.67
UBE4B-210ENST00000488228 CNDP2Q96KP4 475 aaKnown RBP10.88□□□□□ -0.67
UBE4B-210ENST00000488228 APOLD1Q96LR9 279 aa10.88□□□□□ -0.67
UBE4B-210ENST00000488228 TIMM29Q9BSF4 260 aa10.88□□□□□ -0.67
UBE4B-210ENST00000488228 RTKNQ9BST9 563 aa10.88□□□□□ -0.67
UBE4B-210ENST00000488228 KLC4Q9NSK0 619 aa10.88□□□□□ -0.67
UBE4B-210ENST00000488228 C20orf96Q9NUD7 363 aaPredicted RBP10.88□□□□□ -0.67
UBE4B-210ENST00000488228 SPATS2LQ9NUQ6 558 aaKnown RBP10.88□□□□□ -0.67
UBE4B-210ENST00000488228 DLL3Q9NYJ7 618 aa10.88□□□□□ -0.67
UBE4B-210ENST00000488228 U3KQA8 63 aa10.88□□□□□ -0.67
UBE4B-210ENST00000488228 SPEGQ15772 3267 aa10.87□□□□□ -0.67
UBE4B-210ENST00000488228 UBA6A0AVT1 1052 aaPredicted RBP10.87□□□□□ -0.67
UBE4B-210ENST00000488228 MAGEB16A2A368 324 aa10.87□□□□□ -0.67
UBE4B-210ENST00000488228 TPP1O14773 563 aa10.87□□□□□ -0.67
UBE4B-210ENST00000488228 KMOO15229 486 aa10.87□□□□□ -0.67
UBE4B-210ENST00000488228 NOBOXO60393 691 aa10.87□□□□□ -0.67
UBE4B-210ENST00000488228 SNX2O60749 519 aa10.87□□□□□ -0.67
UBE4B-210ENST00000488228 LDOC1O95751 146 aaPredicted RBP10.87□□□□□ -0.67
UBE4B-210ENST00000488228 ERVK-10P10266 1014 aa10.87□□□□□ -0.67
UBE4B-210ENST00000488228 ATP1B2P14415 290 aaPredicted RBP10.87□□□□□ -0.67
UBE4B-210ENST00000488228 OGNP20774 298 aaKnown RBP10.87□□□□□ -0.67
UBE4B-210ENST00000488228 CSRP1P21291 193 aaKnown RBP10.87□□□□□ -0.67
UBE4B-210ENST00000488228 ECHS1P30084 290 aa10.87□□□□□ -0.67
UBE4B-210ENST00000488228 NSG1P42857 185 aa10.87□□□□□ -0.67
UBE4B-210ENST00000488228 TTPAP49638 278 aa10.87□□□□□ -0.67
UBE4B-210ENST00000488228 EIF3BP55884 814 aaKnown RBP10.87□□□□□ -0.67
UBE4B-210ENST00000488228 MAZP56270 477 aaKnown RBP10.87□□□□□ -0.67
UBE4B-210ENST00000488228 DAB2P98082 770 aa10.87□□□□□ -0.67
UBE4B-210ENST00000488228 MPP1Q00013 466 aa10.87□□□□□ -0.67
UBE4B-210ENST00000488228 CAV1Q03135 178 aa10.87□□□□□ -0.67
UBE4B-210ENST00000488228 THOC5Q13769 683 aaKnown RBP10.87□□□□□ -0.67
UBE4B-210ENST00000488228 NFE2L1Q14494 772 aa10.87□□□□□ -0.67
UBE4B-210ENST00000488228 HLTFQ14527 1009 aaKnown RBP eCLIP10.87□□□□□ -0.67
UBE4B-210ENST00000488228 TYSND1Q2T9J0 566 aa10.87□□□□□ -0.67
UBE4B-210ENST00000488228 GLE1Q53GS7 698 aaKnown RBP10.87□□□□□ -0.67
UBE4B-210ENST00000488228 CCDC157Q569K6 752 aa10.87□□□□□ -0.67
UBE4B-210ENST00000488228 HSP90AA5PQ58FG0 334 aa10.87□□□□□ -0.67
UBE4B-210ENST00000488228 STEAP4Q687X5 459 aa10.87□□□□□ -0.67
UBE4B-210ENST00000488228 MRNIPQ6NTE8 343 aa10.87□□□□□ -0.67
UBE4B-210ENST00000488228 NEPROQ6NW34 567 aa10.87□□□□□ -0.67
UBE4B-210ENST00000488228 XKR5Q6UX68 686 aa10.87□□□□□ -0.67
UBE4B-210ENST00000488228 KCNMB4Q86W47 210 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms