RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 PDZK1P1A8MUH7 402 aa18.78■□□□□ 0.6
CLIP2-206ENST00000487091 STX7O15400 261 aaKnown RBP18.78■□□□□ 0.6
CLIP2-206ENST00000487091 UGT1A9O60656 530 aa18.78■□□□□ 0.6
CLIP2-206ENST00000487091 C1QL1O75973 258 aa18.78■□□□□ 0.6
CLIP2-206ENST00000487091 VIPP01282 170 aa18.78■□□□□ 0.6
CLIP2-206ENST00000487091 UGT1A6P19224 532 aa18.78■□□□□ 0.6
CLIP2-206ENST00000487091 UGT1A1P22309 533 aa18.78■□□□□ 0.6
CLIP2-206ENST00000487091 UGT1A4P22310 534 aa18.78■□□□□ 0.6
CLIP2-206ENST00000487091 ADRA1AP35348 466 aa18.78■□□□□ 0.6
CLIP2-206ENST00000487091 UGT1A3P35503 534 aa18.78■□□□□ 0.6
CLIP2-206ENST00000487091 ARSDP51689 593 aa18.78■□□□□ 0.6
CLIP2-206ENST00000487091 RAB15P59190 212 aa18.78■□□□□ 0.6
CLIP2-206ENST00000487091 PRPSAP1Q14558 356 aa18.78■□□□□ 0.6
CLIP2-206ENST00000487091 DARS2Q6PI48 645 aaKnown RBP18.78■□□□□ 0.6
CLIP2-206ENST00000487091 FAM151BQ6UXP7 276 aa18.78■□□□□ 0.6
CLIP2-206ENST00000487091 PLXDC1Q8IUK5 500 aa18.78■□□□□ 0.6
CLIP2-206ENST00000487091 TMEM139Q8IV31 216 aa18.78■□□□□ 0.6
CLIP2-206ENST00000487091 TRIM48Q8IWZ4 208 aa18.78■□□□□ 0.6
CLIP2-206ENST00000487091 BMPERQ8N8U9 685 aa18.78■□□□□ 0.6
CLIP2-206ENST00000487091 DDHD1Q8NEL9 900 aa18.78■□□□□ 0.6
CLIP2-206ENST00000487091 SGF29Q96ES7 293 aa18.78■□□□□ 0.6
CLIP2-206ENST00000487091 TBC1D10AQ9BXI6 508 aa18.78■□□□□ 0.6
CLIP2-206ENST00000487091 UGT1A7Q9HAW7 530 aa18.78■□□□□ 0.6
CLIP2-206ENST00000487091 UGT1A10Q9HAW8 530 aa18.78■□□□□ 0.6
CLIP2-206ENST00000487091 UGT1A8Q9HAW9 530 aa18.78■□□□□ 0.6
CLIP2-206ENST00000487091 POT1Q9NUX5 634 aa18.78■□□□□ 0.6
CLIP2-206ENST00000487091 SMOXQ9NWM0 555 aa18.78■□□□□ 0.6
CLIP2-206ENST00000487091 OCIAD1Q9NX40 245 aa18.78■□□□□ 0.6
CLIP2-206ENST00000487091 IMPACTQ9P2X3 320 aa18.78■□□□□ 0.6
CLIP2-206ENST00000487091 B3GALT1Q9Y5Z6 326 aa18.78■□□□□ 0.6
CLIP2-206ENST00000487091 DNMT3AQ9Y6K1 912 aaPredicted RBP18.78■□□□□ 0.6
CLIP2-206ENST00000487091 C5orf60A6NFR6 353 aa18.77■□□□□ 0.6
CLIP2-206ENST00000487091 C2orf81A6NN90 581 aa18.77■□□□□ 0.6
CLIP2-206ENST00000487091 EFCAB7A8K855 629 aa18.77■□□□□ 0.6
CLIP2-206ENST00000487091 GAPDHSO14556 408 aaPredicted RBP18.77■□□□□ 0.6
CLIP2-206ENST00000487091 KCNN4O15554 427 aa18.77■□□□□ 0.6
CLIP2-206ENST00000487091 BUD23O43709 281 aaKnown RBP18.77■□□□□ 0.6
CLIP2-206ENST00000487091 BRAFP15056 766 aa18.77■□□□□ 0.6
CLIP2-206ENST00000487091 LPOP22079 712 aaPredicted RBP18.77■□□□□ 0.6
CLIP2-206ENST00000487091 PSMB4P28070 264 aa18.77■□□□□ 0.6
CLIP2-206ENST00000487091 MAPK9P45984 424 aa18.77■□□□□ 0.6
CLIP2-206ENST00000487091 MC2RQ01718 297 aa18.77■□□□□ 0.6
CLIP2-206ENST00000487091 DMPKQ09013 629 aa18.77■□□□□ 0.6
CLIP2-206ENST00000487091 KIF5AQ12840 1032 aa18.77■□□□□ 0.6
CLIP2-206ENST00000487091 TAF1AQ15573 450 aaPredicted RBP18.77■□□□□ 0.6
CLIP2-206ENST00000487091 SNAP47Q5SQN1 464 aa18.77■□□□□ 0.6
CLIP2-206ENST00000487091 DCAF12Q5T6F0 453 aa18.77■□□□□ 0.6
CLIP2-206ENST00000487091 KIAA1614Q5VZ46 1190 aa18.77■□□□□ 0.6
CLIP2-206ENST00000487091 AADACL2Q6P093 401 aa18.77■□□□□ 0.6
CLIP2-206ENST00000487091 PEX26Q7Z412 305 aa18.77■□□□□ 0.6
CLIP2-206ENST00000487091 FAM129CQ86XR2 697 aa18.77■□□□□ 0.6
CLIP2-206ENST00000487091 RBM12BQ8IXT5 1001 aaKnown RBP18.77■□□□□ 0.6
CLIP2-206ENST00000487091 SYCE1Q8N0S2 351 aa18.77■□□□□ 0.6
CLIP2-206ENST00000487091 RASGEF1AQ8N9B8 481 aa18.77■□□□□ 0.6
CLIP2-206ENST00000487091 TTC13Q8NBP0 860 aa18.77■□□□□ 0.6
CLIP2-206ENST00000487091 SPATA13Q96N96 652 aa18.77■□□□□ 0.6
CLIP2-206ENST00000487091 TEFMQ96QE5 360 aaKnown RBP18.77■□□□□ 0.6
CLIP2-206ENST00000487091 COL6A6A6NMZ7 2263 aa18.77■□□□□ 0.6
CLIP2-206ENST00000487091 MN1Q10571 1320 aaPredicted RBP18.76■□□□□ 0.59
CLIP2-206ENST00000487091 A8MU76 341 aa18.76■□□□□ 0.59
CLIP2-206ENST00000487091 MIF4GDA9UHW6 222 aaKnown RBP18.76■□□□□ 0.59
CLIP2-206ENST00000487091 RPL10P27635 214 aaKnown RBP18.76■□□□□ 0.59
CLIP2-206ENST00000487091 CDC25BP30305 580 aa18.76■□□□□ 0.59
CLIP2-206ENST00000487091 SRSF6Q13247 344 aaKnown RBP18.76■□□□□ 0.59
CLIP2-206ENST00000487091 GPRC6AQ5T6X5 926 aa18.76■□□□□ 0.59
CLIP2-206ENST00000487091 AMZ2Q86W34 360 aa18.76■□□□□ 0.59
CLIP2-206ENST00000487091 KLHDC8BQ8IXV7 354 aa18.76■□□□□ 0.59
CLIP2-206ENST00000487091 UBL4BQ8N7F7 174 aa18.76■□□□□ 0.59
CLIP2-206ENST00000487091 ZNF398Q8TD17 642 aa18.76■□□□□ 0.59
CLIP2-206ENST00000487091 PMEPA1Q969W9 287 aa18.76■□□□□ 0.59
CLIP2-206ENST00000487091 ZNF514Q96K75 400 aaPredicted RBP18.76■□□□□ 0.59
CLIP2-206ENST00000487091 FAM118BQ9BPY3 351 aa18.76■□□□□ 0.59
CLIP2-206ENST00000487091 C19orf43Q9BQ61 176 aa18.76■□□□□ 0.59
CLIP2-206ENST00000487091 SLC40A1Q9NP59 571 aa18.76■□□□□ 0.59
CLIP2-206ENST00000487091 FBXO8Q9NRD0 319 aa18.76■□□□□ 0.59
CLIP2-206ENST00000487091 FEZ2Q9UHY8 353 aaPredicted RBP18.76■□□□□ 0.59
CLIP2-206ENST00000487091 ARL5AQ9Y689 179 aa18.76■□□□□ 0.59
CLIP2-206ENST00000487091 GOLGA6L9A6NEM1 432 aa18.75■□□□□ 0.59
CLIP2-206ENST00000487091 POP7O75817 140 aaKnown RBP18.75■□□□□ 0.59
CLIP2-206ENST00000487091 UBXN7O94888 489 aa18.75■□□□□ 0.59
CLIP2-206ENST00000487091 C9P02748 559 aa18.75■□□□□ 0.59
CLIP2-206ENST00000487091 ANKRD34CP0C6C1 535 aa18.75■□□□□ 0.59
CLIP2-206ENST00000487091 ATP1A2P50993 1020 aa18.75■□□□□ 0.59
CLIP2-206ENST00000487091 PDE1BQ01064 536 aa18.75■□□□□ 0.59
CLIP2-206ENST00000487091 MSLNQ13421 630 aaPredicted RBP18.75■□□□□ 0.59
CLIP2-206ENST00000487091 PTPRCAPQ14761 206 aa18.75■□□□□ 0.59
CLIP2-206ENST00000487091 SEPT7Q16181 437 aaKnown RBP18.75■□□□□ 0.59
CLIP2-206ENST00000487091 TMEM220Q6QAJ8 160 aa18.75■□□□□ 0.59
CLIP2-206ENST00000487091 VASH2Q86V25 355 aa18.75■□□□□ 0.59
CLIP2-206ENST00000487091 ZNF843Q8N446 348 aa18.75■□□□□ 0.59
CLIP2-206ENST00000487091 ZSCAN1Q8NBB4 408 aa18.75■□□□□ 0.59
CLIP2-206ENST00000487091 OR4K2Q8NGD2 314 aa18.75■□□□□ 0.59
CLIP2-206ENST00000487091 CCDC110Q8TBZ0 833 aa18.75■□□□□ 0.59
CLIP2-206ENST00000487091 NKD1Q969G9 470 aa18.75■□□□□ 0.59
CLIP2-206ENST00000487091 LRRC45Q96CN5 670 aa18.75■□□□□ 0.59
CLIP2-206ENST00000487091 CXorf40BQ96DE9 158 aa18.75■□□□□ 0.59
CLIP2-206ENST00000487091 ZPBPQ9BS86 351 aa18.75■□□□□ 0.59
CLIP2-206ENST00000487091 ARNT2Q9HBZ2 717 aa18.75■□□□□ 0.59
CLIP2-206ENST00000487091 OGFRQ9NZT2 677 aa18.75■□□□□ 0.59
CLIP2-206ENST00000487091 SLC30A1Q9Y6M5 507 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms