RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 DCUN1D1Q96GG9 259 aa12.69□□□□□ -0.38
CHMP3-208ENST00000486404 CRELD1Q96HD1 420 aa12.69□□□□□ -0.38
CHMP3-208ENST00000486404 PRR11Q96HE9 360 aaPredicted RBP12.69□□□□□ -0.38
CHMP3-208ENST00000486404 DPH1Q9BZG8 443 aa12.69□□□□□ -0.38
CHMP3-208ENST00000486404 EPB41L1Q9H4G0 881 aa12.69□□□□□ -0.38
CHMP3-208ENST00000486404 ASB8Q9H765 288 aa12.69□□□□□ -0.38
CHMP3-208ENST00000486404 UGT1A7Q9HAW7 530 aa12.69□□□□□ -0.38
CHMP3-208ENST00000486404 UGT1A10Q9HAW8 530 aa12.69□□□□□ -0.38
CHMP3-208ENST00000486404 UGT1A8Q9HAW9 530 aa12.69□□□□□ -0.38
CHMP3-208ENST00000486404 CPNE7Q9UBL6 633 aa12.69□□□□□ -0.38
CHMP3-208ENST00000486404 PCDHGA7Q9Y5G6 932 aa12.69□□□□□ -0.38
CHMP3-208ENST00000486404 BPTFQ12830 3046 aa12.69□□□□□ -0.38
CHMP3-208ENST00000486404 NBEAQ8NFP9 2946 aa12.68□□□□□ -0.38
CHMP3-208ENST00000486404 LILRA5A6NI73 299 aa12.68□□□□□ -0.38
CHMP3-208ENST00000486404 CFAP99D6REC4 459 aa12.68□□□□□ -0.38
CHMP3-208ENST00000486404 HAX1O00165 279 aa12.68□□□□□ -0.38
CHMP3-208ENST00000486404 PSMD3O43242 534 aa12.68□□□□□ -0.38
CHMP3-208ENST00000486404 SRP72O76094 671 aaKnown RBP12.68□□□□□ -0.38
CHMP3-208ENST00000486404 THRAP10827 490 aa12.68□□□□□ -0.38
CHMP3-208ENST00000486404 RALBP11234 206 aa12.68□□□□□ -0.38
CHMP3-208ENST00000486404 ITIH1P19827 911 aa12.68□□□□□ -0.38
CHMP3-208ENST00000486404 MPSTP25325 297 aa12.68□□□□□ -0.38
CHMP3-208ENST00000486404 RPL10P27635 214 aaKnown RBP12.68□□□□□ -0.38
CHMP3-208ENST00000486404 SLC5A2P31639 672 aa12.68□□□□□ -0.38
CHMP3-208ENST00000486404 CSTF2P33240 577 aaKnown RBP eCLIP12.68□□□□□ -0.38
CHMP3-208ENST00000486404 ZNF140P52738 457 aaPredicted RBP12.68□□□□□ -0.38
CHMP3-208ENST00000486404 LIMK2P53671 638 aa12.68□□□□□ -0.38
CHMP3-208ENST00000486404 PTPRCAPQ14761 206 aa12.68□□□□□ -0.38
CHMP3-208ENST00000486404 C16orf72Q14CZ0 275 aa12.68□□□□□ -0.38
CHMP3-208ENST00000486404 SNAP47Q5SQN1 464 aa12.68□□□□□ -0.38
CHMP3-208ENST00000486404 FNBP1LQ5T0N5 605 aa12.68□□□□□ -0.38
CHMP3-208ENST00000486404 MEI1Q5TIA1 1274 aa12.68□□□□□ -0.38
CHMP3-208ENST00000486404 DET1Q7L5Y6 550 aa12.68□□□□□ -0.38
CHMP3-208ENST00000486404 LINC00523Q86TU6 105 aa12.68□□□□□ -0.38
CHMP3-208ENST00000486404 AMZ2Q86W34 360 aa12.68□□□□□ -0.38
CHMP3-208ENST00000486404 FAM129CQ86XR2 697 aa12.68□□□□□ -0.38
CHMP3-208ENST00000486404 SLC13A5Q86YT5 568 aaPredicted RBP12.68□□□□□ -0.38
CHMP3-208ENST00000486404 LRRC8AQ8IWT6 810 aa12.68□□□□□ -0.38
CHMP3-208ENST00000486404 RASGEF1AQ8N9B8 481 aa12.68□□□□□ -0.38
CHMP3-208ENST00000486404 AGBL5Q8NDL9 886 aa12.68□□□□□ -0.38
CHMP3-208ENST00000486404 OR13C4Q8NGS5 318 aa12.68□□□□□ -0.38
CHMP3-208ENST00000486404 ZNF398Q8TD17 642 aa12.68□□□□□ -0.38
CHMP3-208ENST00000486404 ZNF514Q96K75 400 aaPredicted RBP12.68□□□□□ -0.38
CHMP3-208ENST00000486404 POT1Q9NUX5 634 aa12.68□□□□□ -0.38
CHMP3-208ENST00000486404 FAM8A1Q9UBU6 413 aa12.68□□□□□ -0.38
CHMP3-208ENST00000486404 SLC23A2Q9UGH3 650 aa12.68□□□□□ -0.38
CHMP3-208ENST00000486404 TMPRSS11EQ9UL52 423 aa12.68□□□□□ -0.38
CHMP3-208ENST00000486404 ZNF148Q9UQR1 794 aa12.68□□□□□ -0.38
CHMP3-208ENST00000486404 KCTD3Q9Y597 815 aa12.68□□□□□ -0.38
CHMP3-208ENST00000486404 SLC30A1Q9Y6M5 507 aa12.68□□□□□ -0.38
CHMP3-208ENST00000486404 ZFHX4Q86UP3 3567 aa12.68□□□□□ -0.38
CHMP3-208ENST00000486404 PIKFYVEQ9Y2I7 2098 aa12.67□□□□□ -0.38
CHMP3-208ENST00000486404 PRAMEF33A0A0G2JMD5 474 aa12.67□□□□□ -0.38
CHMP3-208ENST00000486404 LIASO43766 372 aa12.67□□□□□ -0.38
CHMP3-208ENST00000486404 PRAMEF10O60809 474 aa12.67□□□□□ -0.38
CHMP3-208ENST00000486404 KCNJ13O60928 360 aa12.67□□□□□ -0.38
CHMP3-208ENST00000486404 METTL18O95568 372 aa12.67□□□□□ -0.38
CHMP3-208ENST00000486404 AP2A1O95782 977 aa12.67□□□□□ -0.38
CHMP3-208ENST00000486404 CTSCP53634 463 aa12.67□□□□□ -0.38
CHMP3-208ENST00000486404 DRG2P55039 364 aaKnown RBP12.67□□□□□ -0.38
CHMP3-208ENST00000486404 UBE2IP63279 158 aaKnown RBP12.67□□□□□ -0.38
CHMP3-208ENST00000486404 SNX1Q13596 522 aa12.67□□□□□ -0.38
CHMP3-208ENST00000486404 POU6F1Q14863 301 aa12.67□□□□□ -0.38
CHMP3-208ENST00000486404 TMEM71Q6P5X7 295 aa12.67□□□□□ -0.38
CHMP3-208ENST00000486404 TMEM220Q6QAJ8 160 aa12.67□□□□□ -0.38
CHMP3-208ENST00000486404 PPP1R21Q6ZMI0 780 aa12.67□□□□□ -0.38
CHMP3-208ENST00000486404 DNAAF3Q8N9W5 541 aa12.67□□□□□ -0.38
CHMP3-208ENST00000486404 TRIM58Q8NG06 486 aa12.67□□□□□ -0.38
CHMP3-208ENST00000486404 C1orf54Q8WWF1 131 aa12.67□□□□□ -0.38
CHMP3-208ENST00000486404 NCSTNQ92542 709 aa12.67□□□□□ -0.38
CHMP3-208ENST00000486404 RTP4Q96DX8 246 aa12.67□□□□□ -0.38
CHMP3-208ENST00000486404 DNAJC1Q96KC8 554 aaKnown RBP12.67□□□□□ -0.38
CHMP3-208ENST00000486404 TMEM9Q9P0T7 183 aa12.67□□□□□ -0.38
CHMP3-208ENST00000486404 KLHL3Q9UH77 587 aa12.67□□□□□ -0.38
CHMP3-208ENST00000486404 LAMA5O15230 3695 aa12.67□□□□□ -0.38
CHMP3-208ENST00000486404 OR52A4PA6NMU1 304 aa12.66□□□□□ -0.38
CHMP3-208ENST00000486404 EIF4E1BA6NMX2 242 aaKnown RBP12.66□□□□□ -0.38
CHMP3-208ENST00000486404 ERI2A8K979 691 aaKnown RBP12.66□□□□□ -0.38
CHMP3-208ENST00000486404 GAPDHSO14556 408 aaPredicted RBP12.66□□□□□ -0.38
CHMP3-208ENST00000486404 HOXB3P14651 431 aaPredicted RBP12.66□□□□□ -0.38
CHMP3-208ENST00000486404 XRCC1P18887 633 aaPredicted RBP12.66□□□□□ -0.38
CHMP3-208ENST00000486404 STIP1P31948 543 aaKnown RBP12.66□□□□□ -0.38
CHMP3-208ENST00000486404 MC4RP32245 332 aa12.66□□□□□ -0.38
CHMP3-208ENST00000486404 FDFT1P37268 417 aa12.66□□□□□ -0.38
CHMP3-208ENST00000486404 ETV5P41161 510 aa12.66□□□□□ -0.38
CHMP3-208ENST00000486404 CCZ1BP86790 482 aa12.66□□□□□ -0.38
CHMP3-208ENST00000486404 CCZ1P86791 482 aaPredicted RBP12.66□□□□□ -0.38
CHMP3-208ENST00000486404 SQSTM1Q13501 440 aa12.66□□□□□ -0.38
CHMP3-208ENST00000486404 ZRANB3Q5FWF4 1079 aa12.66□□□□□ -0.38
CHMP3-208ENST00000486404 AGAP9Q5VTM2 703 aa12.66□□□□□ -0.38
CHMP3-208ENST00000486404 KCTD11Q693B1 232 aa12.66□□□□□ -0.38
CHMP3-208ENST00000486404 DENND5AQ6IQ26 1287 aa12.66□□□□□ -0.38
CHMP3-208ENST00000486404 WDR74Q6RFH5 385 aaPredicted RBP12.66□□□□□ -0.38
CHMP3-208ENST00000486404 TMEM26Q6ZUK4 368 aa12.66□□□□□ -0.38
CHMP3-208ENST00000486404 SNX20Q7Z614 316 aa12.66□□□□□ -0.38
CHMP3-208ENST00000486404 RBM12BQ8IXT5 1001 aaKnown RBP12.66□□□□□ -0.38
CHMP3-208ENST00000486404 HEXDCQ8WVB3 486 aa12.66□□□□□ -0.38
CHMP3-208ENST00000486404 MAIP1Q8WWC4 291 aa12.66□□□□□ -0.38
CHMP3-208ENST00000486404 USP7Q93009 1102 aa12.66□□□□□ -0.38
CHMP3-208ENST00000486404 COPS8Q99627 209 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms