RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 TXNDC11Q6PKC3 985 aa16.5■□□□□ 0.23
CTSA-207ENST00000484855 EP400NLQ6ZTU2 488 aa16.5■□□□□ 0.23
CTSA-207ENST00000484855 ADAMTSL2Q86TH1 951 aa16.5■□□□□ 0.23
CTSA-207ENST00000484855 TMIEQ8NEW7 156 aa16.5■□□□□ 0.23
CTSA-207ENST00000484855 PIP4K2CQ8TBX8 421 aa16.5■□□□□ 0.23
CTSA-207ENST00000484855 FGF14Q92915 247 aa16.5■□□□□ 0.23
CTSA-207ENST00000484855 S1PR5Q9H228 398 aa16.5■□□□□ 0.23
CTSA-207ENST00000484855 SPATS2LQ9NUQ6 558 aaKnown RBP16.5■□□□□ 0.23
CTSA-207ENST00000484855 SMOXQ9NWM0 555 aa16.5■□□□□ 0.23
CTSA-207ENST00000484855 CD274Q9NZQ7 290 aa16.5■□□□□ 0.23
CTSA-207ENST00000484855 TICRRQ7Z2Z1 1910 aa16.5■□□□□ 0.23
CTSA-207ENST00000484855 TBX10O75333 385 aa16.5■□□□□ 0.23
CTSA-207ENST00000484855 CPA2P48052 419 aa16.5■□□□□ 0.23
CTSA-207ENST00000484855 HK3P52790 923 aa16.5■□□□□ 0.23
CTSA-207ENST00000484855 METAP1P53582 386 aa16.5■□□□□ 0.23
CTSA-207ENST00000484855 DLX2Q07687 328 aaPredicted RBP16.5■□□□□ 0.23
CTSA-207ENST00000484855 GRIN2CQ14957 1233 aa16.5■□□□□ 0.23
CTSA-207ENST00000484855 TTLL9Q3SXZ7 439 aa16.5■□□□□ 0.23
CTSA-207ENST00000484855 NXNQ6DKJ4 435 aa16.5■□□□□ 0.23
CTSA-207ENST00000484855 CYB5D1Q6P9G0 228 aa16.5■□□□□ 0.23
CTSA-207ENST00000484855 SUSD6Q92537 303 aa16.5■□□□□ 0.23
CTSA-207ENST00000484855 RIPOR3Q96MK2 946 aa16.5■□□□□ 0.23
CTSA-207ENST00000484855 BTBD10Q9BSF8 475 aa16.5■□□□□ 0.23
CTSA-207ENST00000484855 CCDC28BQ9BUN5 200 aa16.5■□□□□ 0.23
CTSA-207ENST00000484855 TBC1D10AQ9BXI6 508 aa16.5■□□□□ 0.23
CTSA-207ENST00000484855 NUDT4Q9NZJ9 180 aa16.5■□□□□ 0.23
CTSA-207ENST00000484855 NFKBIL1Q9UBC1 381 aaPredicted RBP16.5■□□□□ 0.23
CTSA-207ENST00000484855 TMPRSS11EQ9UL52 423 aa16.5■□□□□ 0.23
CTSA-207ENST00000484855 PPM1HQ9ULR3 514 aa16.5■□□□□ 0.23
CTSA-207ENST00000484855 ITM2BQ9Y287 266 aa16.5■□□□□ 0.23
CTSA-207ENST00000484855 SZT2Q5T011 3432 aa16.49■□□□□ 0.23
CTSA-207ENST00000484855 MAGEC1O60732 1142 aa16.49■□□□□ 0.23
CTSA-207ENST00000484855 KAT7O95251 611 aa16.49■□□□□ 0.23
CTSA-207ENST00000484855 RPS17P08708 135 aaKnown RBP16.49■□□□□ 0.23
CTSA-207ENST00000484855 OR56A5P0C7T3 313 aa16.49■□□□□ 0.23
CTSA-207ENST00000484855 EIF2DP41214 584 aaKnown RBP16.49■□□□□ 0.23
CTSA-207ENST00000484855 IL12RB1P42701 662 aa16.49■□□□□ 0.23
CTSA-207ENST00000484855 TGFBIQ15582 683 aa16.49■□□□□ 0.23
CTSA-207ENST00000484855 ZNF284Q2VY69 593 aa16.49■□□□□ 0.23
CTSA-207ENST00000484855 ACSBG2Q5FVE4 666 aa16.49■□□□□ 0.23
CTSA-207ENST00000484855 FBXO48Q5FWF7 155 aa16.49■□□□□ 0.23
CTSA-207ENST00000484855 HENMT1Q5T8I9 393 aaKnown RBP16.49■□□□□ 0.23
CTSA-207ENST00000484855 ANKS6Q68DC2 871 aa16.49■□□□□ 0.23
CTSA-207ENST00000484855 LIPIQ6XZB0 460 aa16.49■□□□□ 0.23
CTSA-207ENST00000484855 RINLQ6ZS11 566 aa16.49■□□□□ 0.23
CTSA-207ENST00000484855 TRAM1L1Q8N609 369 aa16.49■□□□□ 0.23
CTSA-207ENST00000484855 ARRDC3Q96B67 414 aa16.49■□□□□ 0.23
CTSA-207ENST00000484855 NSUN5Q96P11 429 aaKnown RBP16.49■□□□□ 0.23
CTSA-207ENST00000484855 ZSCAN5AQ9BUG6 496 aa16.49■□□□□ 0.23
CTSA-207ENST00000484855 MID1IP1Q9NPA3 183 aa16.49■□□□□ 0.23
CTSA-207ENST00000484855 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.49■□□□□ 0.23
CTSA-207ENST00000484855 TRAF6Q9Y4K3 522 aa16.49■□□□□ 0.23
CTSA-207ENST00000484855 RGSL1A5PLK6 1076 aa16.48■□□□□ 0.23
CTSA-207ENST00000484855 SPECC1L-ADORA2AF8WAN1 911 aa16.48■□□□□ 0.23
CTSA-207ENST00000484855 DCXO43602 365 aa16.48■□□□□ 0.23
CTSA-207ENST00000484855 NAA20P61599 178 aa16.48■□□□□ 0.23
CTSA-207ENST00000484855 CLCQ05315 142 aa16.48■□□□□ 0.23
CTSA-207ENST00000484855 BTKQ06187 659 aa16.48■□□□□ 0.23
CTSA-207ENST00000484855 FBXL19Q6PCT2 694 aa16.48■□□□□ 0.23
CTSA-207ENST00000484855 SBSNQ6UWP8 590 aa16.48■□□□□ 0.23
CTSA-207ENST00000484855 DTX3LQ8TDB6 740 aa16.48■□□□□ 0.23
CTSA-207ENST00000484855 TRPC4APQ8TEL6 797 aa16.48■□□□□ 0.23
CTSA-207ENST00000484855 UTP4Q969X6 686 aaKnown RBP16.48■□□□□ 0.23
CTSA-207ENST00000484855 CHFRQ96EP1 664 aa16.48■□□□□ 0.23
CTSA-207ENST00000484855 DCUN1D1Q96GG9 259 aa16.48■□□□□ 0.23
CTSA-207ENST00000484855 PPP1R16AQ96I34 528 aa16.48■□□□□ 0.23
CTSA-207ENST00000484855 MAELQ96JY0 434 aaKnown RBP16.48■□□□□ 0.23
CTSA-207ENST00000484855 MIPEPQ99797 713 aa16.48■□□□□ 0.23
CTSA-207ENST00000484855 RIOK2Q9BVS4 552 aaKnown RBP16.48■□□□□ 0.23
CTSA-207ENST00000484855 KCTD5Q9NXV2 234 aa16.48■□□□□ 0.23
CTSA-207ENST00000484855 CLDND1Q9NY35 253 aa16.48■□□□□ 0.23
CTSA-207ENST00000484855 UTP6Q9NYH9 597 aaKnown RBP16.48■□□□□ 0.23
CTSA-207ENST00000484855 PSMD11O00231 422 aa16.48■□□□□ 0.23
CTSA-207ENST00000484855 SDHDO14521 159 aa16.48■□□□□ 0.23
CTSA-207ENST00000484855 GYG2O15488 501 aa16.48■□□□□ 0.23
CTSA-207ENST00000484855 CDK14O94921 469 aa16.48■□□□□ 0.23
CTSA-207ENST00000484855 SATB1Q01826 763 aa16.48■□□□□ 0.23
CTSA-207ENST00000484855 LCP2Q13094 533 aa16.48■□□□□ 0.23
CTSA-207ENST00000484855 ACOX1Q15067 660 aa16.48■□□□□ 0.23
CTSA-207ENST00000484855 CRY1Q16526 586 aa16.48■□□□□ 0.23
CTSA-207ENST00000484855 ITPRIPL2Q3MIP1 535 aa16.48■□□□□ 0.23
CTSA-207ENST00000484855 PREPLQ4J6C6 727 aaPredicted RBP16.48■□□□□ 0.23
CTSA-207ENST00000484855 CLEC6AQ6EIG7 209 aa16.48■□□□□ 0.23
CTSA-207ENST00000484855 DET1Q7L5Y6 550 aa16.48■□□□□ 0.23
CTSA-207ENST00000484855 TECPR1Q7Z6L1 1165 aa16.48■□□□□ 0.23
CTSA-207ENST00000484855 LONP2Q86WA8 852 aa16.48■□□□□ 0.23
CTSA-207ENST00000484855 TEX9Q8N6V9 391 aa16.48■□□□□ 0.23
CTSA-207ENST00000484855 FAM129BQ96TA1 746 aa16.48■□□□□ 0.23
CTSA-207ENST00000484855 WRAP53Q9BUR4 548 aaKnown RBP16.48■□□□□ 0.23
CTSA-207ENST00000484855 TRMT61BQ9BVS5 477 aaKnown RBP16.48■□□□□ 0.23
CTSA-207ENST00000484855 C1QTNF3Q9BXJ4 246 aa16.48■□□□□ 0.23
CTSA-207ENST00000484855 FAM126AQ9BYI3 521 aaPredicted RBP16.48■□□□□ 0.23
CTSA-207ENST00000484855 MEAF6Q9HAF1 191 aa16.48■□□□□ 0.23
CTSA-207ENST00000484855 ZDHHC4Q9NPG8 344 aa16.48■□□□□ 0.23
CTSA-207ENST00000484855 LATS2Q9NRM7 1088 aa16.48■□□□□ 0.23
CTSA-207ENST00000484855 THAP10Q9P2Z0 257 aaPredicted RBP16.48■□□□□ 0.23
CTSA-207ENST00000484855 CFAP99D6REC4 459 aa16.47■□□□□ 0.23
CTSA-207ENST00000484855 S100BP04271 92 aaPredicted RBP16.47■□□□□ 0.23
CTSA-207ENST00000484855 APODP05090 189 aa16.47■□□□□ 0.23
CTSA-207ENST00000484855 EPHX1P07099 455 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms