RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 FAM182AQ5T1J6 154 aa11.26□□□□□ -0.61
SCFD1-206ENST00000484733 B4GALNT4Q76KP1 1039 aa11.26□□□□□ -0.61
SCFD1-206ENST00000484733 KATNAL2Q8IYT4 538 aa11.26□□□□□ -0.61
SCFD1-206ENST00000484733 ZDHHC12Q96GR4 267 aa11.26□□□□□ -0.61
SCFD1-206ENST00000484733 MRGPRX2Q96LB1 330 aa11.26□□□□□ -0.61
SCFD1-206ENST00000484733 ZCCHC2Q9C0B9 1178 aaKnown RBP11.26□□□□□ -0.61
SCFD1-206ENST00000484733 IL26Q9NPH9 171 aa11.26□□□□□ -0.61
SCFD1-206ENST00000484733 TRHDEQ9UKU6 1024 aa11.26□□□□□ -0.61
SCFD1-206ENST00000484733 ALG6Q9Y672 507 aa11.26□□□□□ -0.61
SCFD1-206ENST00000484733 AKR1B15C9JRZ8 316 aaPredicted RBP11.25□□□□□ -0.61
SCFD1-206ENST00000484733 MTX2O75431 263 aa11.25□□□□□ -0.61
SCFD1-206ENST00000484733 LCA5LO95447 670 aa11.25□□□□□ -0.61
SCFD1-206ENST00000484733 FGF5P12034 268 aa11.25□□□□□ -0.61
SCFD1-206ENST00000484733 PECAM1P16284 738 aaPredicted RBP11.25□□□□□ -0.61
SCFD1-206ENST00000484733 TYRP1P17643 537 aa11.25□□□□□ -0.61
SCFD1-206ENST00000484733 CAPZBP47756 277 aa11.25□□□□□ -0.61
SCFD1-206ENST00000484733 TFDP3Q5H9I0 405 aa11.25□□□□□ -0.61
SCFD1-206ENST00000484733 CYB5D1Q6P9G0 228 aa11.25□□□□□ -0.61
SCFD1-206ENST00000484733 C6orf15Q6UXA7 325 aaPredicted RBP11.25□□□□□ -0.61
SCFD1-206ENST00000484733 DDHD1Q8NEL9 900 aa11.25□□□□□ -0.61
SCFD1-206ENST00000484733 P3H4Q92791 437 aa11.25□□□□□ -0.61
SCFD1-206ENST00000484733 CXorf40BQ96DE9 158 aa11.25□□□□□ -0.61
SCFD1-206ENST00000484733 BPIFA1Q9NP55 256 aa11.25□□□□□ -0.61
SCFD1-206ENST00000484733 UBP1Q9NZI7 540 aa11.25□□□□□ -0.61
SCFD1-206ENST00000484733 SAE1Q9UBE0 346 aaPredicted RBP11.25□□□□□ -0.61
SCFD1-206ENST00000484733 DNAJC16Q9Y2G8 782 aa11.25□□□□□ -0.61
SCFD1-206ENST00000484733 HYOU1Q9Y4L1 999 aa11.25□□□□□ -0.61
SCFD1-206ENST00000484733 hCG_1818297A0A087WSY0 165 aa11.25□□□□□ -0.61
SCFD1-206ENST00000484733 RECKO95980 971 aa11.25□□□□□ -0.61
SCFD1-206ENST00000484733 SLC4A1P02730 911 aa11.25□□□□□ -0.61
SCFD1-206ENST00000484733 HALP42357 657 aa11.25□□□□□ -0.61
SCFD1-206ENST00000484733 NFKB2Q00653 900 aa11.25□□□□□ -0.61
SCFD1-206ENST00000484733 XRCC4Q13426 336 aa11.25□□□□□ -0.61
SCFD1-206ENST00000484733 ITGA9Q13797 1035 aa11.25□□□□□ -0.61
SCFD1-206ENST00000484733 SLC1A5Q15758 541 aa11.25□□□□□ -0.61
SCFD1-206ENST00000484733 PPP2R5EQ16537 467 aa11.25□□□□□ -0.61
SCFD1-206ENST00000484733 ZNF567Q8N184 647 aa11.25□□□□□ -0.61
SCFD1-206ENST00000484733 TGM7Q96PF1 710 aa11.25□□□□□ -0.61
SCFD1-206ENST00000484733 FCRL4Q96PJ5 515 aa11.25□□□□□ -0.61
SCFD1-206ENST00000484733 QKIQ96PU8 341 aaKnown RBP eCLIP11.25□□□□□ -0.618e-7■■■■■ 54.9
SCFD1-206ENST00000484733 SMOXQ9NWM0 555 aa11.25□□□□□ -0.61
SCFD1-206ENST00000484733 KLHL33A6NCF5 533 aa11.24□□□□□ -0.61
SCFD1-206ENST00000484733 PYCARD-AS1I3L0S3 204 aa11.24□□□□□ -0.61
SCFD1-206ENST00000484733 ZRANB2O95218 330 aaKnown RBP eCLIP11.24□□□□□ -0.61
SCFD1-206ENST00000484733 TNNT1P13805 278 aa11.24□□□□□ -0.61
SCFD1-206ENST00000484733 TCN2P20062 427 aa11.24□□□□□ -0.61
SCFD1-206ENST00000484733 MAGEA1P43355 309 aa11.24□□□□□ -0.61
SCFD1-206ENST00000484733 TNNT3P45378 269 aaPredicted RBP11.24□□□□□ -0.61
SCFD1-206ENST00000484733 LEPRP48357 1165 aaKnown RBP11.24□□□□□ -0.61
SCFD1-206ENST00000484733 ADCY2Q08462 1091 aa11.24□□□□□ -0.61
SCFD1-206ENST00000484733 GPR18Q14330 331 aa11.24□□□□□ -0.61
SCFD1-206ENST00000484733 CHRNA6Q15825 494 aa11.24□□□□□ -0.61
SCFD1-206ENST00000484733 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.24□□□□□ -0.61
SCFD1-206ENST00000484733 PID1Q7Z2X4 250 aa11.24□□□□□ -0.61
SCFD1-206ENST00000484733 AMZ2Q86W34 360 aa11.24□□□□□ -0.61
SCFD1-206ENST00000484733 TRAPPC5Q8IUR0 188 aa11.24□□□□□ -0.61
SCFD1-206ENST00000484733 ZFPM2Q8WW38 1151 aa11.24□□□□□ -0.61
SCFD1-206ENST00000484733 OXNAD1Q96HP4 312 aaPredicted RBP11.24□□□□□ -0.61
SCFD1-206ENST00000484733 RBM41Q96IZ5 413 aaKnown RBP11.24□□□□□ -0.61
SCFD1-206ENST00000484733 TSPY26PQ9H489 355 aa11.24□□□□□ -0.61
SCFD1-206ENST00000484733 KLHL8Q9P2G9 620 aaPredicted RBP11.24□□□□□ -0.61
SCFD1-206ENST00000484733 WDR37Q9Y2I8 494 aa11.24□□□□□ -0.61
SCFD1-206ENST00000484733 KCTD3Q9Y597 815 aa11.24□□□□□ -0.61
SCFD1-206ENST00000484733 RPS6KL1Q9Y6S9 549 aa11.24□□□□□ -0.61
SCFD1-206ENST00000484733 GLYATL1P3A0A0U1RQE8 302 aa11.24□□□□□ -0.61
SCFD1-206ENST00000484733 OR52A4PA6NMU1 304 aa11.24□□□□□ -0.61
SCFD1-206ENST00000484733 GAPDHSO14556 408 aaPredicted RBP11.24□□□□□ -0.61
SCFD1-206ENST00000484733 POP7O75817 140 aaKnown RBP11.24□□□□□ -0.61
SCFD1-206ENST00000484733 FECHP22830 423 aa11.24□□□□□ -0.61
SCFD1-206ENST00000484733 RPL10P27635 214 aaKnown RBP11.24□□□□□ -0.61
SCFD1-206ENST00000484733 OAS2P29728 719 aaKnown RBP11.24□□□□□ -0.61
SCFD1-206ENST00000484733 FOXM1Q08050 763 aa11.24□□□□□ -0.61
SCFD1-206ENST00000484733 NOMO1Q15155 1222 aa11.24□□□□□ -0.61
SCFD1-206ENST00000484733 SEPT7Q16181 437 aaKnown RBP11.24□□□□□ -0.61
SCFD1-206ENST00000484733 CACHD1Q5VU97 1274 aa11.24□□□□□ -0.61
SCFD1-206ENST00000484733 KAZNQ674X7 775 aa11.24□□□□□ -0.61
SCFD1-206ENST00000484733 C11orf63Q6NUN7 778 aa11.24□□□□□ -0.61
SCFD1-206ENST00000484733 BBS12Q6ZW61 710 aa11.24□□□□□ -0.61
SCFD1-206ENST00000484733 GLT6D1Q7Z4J2 308 aa11.24□□□□□ -0.61
SCFD1-206ENST00000484733 BPHLQ86WA6 291 aaPredicted RBP11.24□□□□□ -0.61
SCFD1-206ENST00000484733 RASGEF1AQ8N9B8 481 aa11.24□□□□□ -0.61
SCFD1-206ENST00000484733 GDAP1Q8TB36 358 aa11.24□□□□□ -0.61
SCFD1-206ENST00000484733 APOBEC4Q8WW27 367 aaKnown RBP11.24□□□□□ -0.61
SCFD1-206ENST00000484733 STARD8Q92502 1023 aa11.24□□□□□ -0.61
SCFD1-206ENST00000484733 UBXN4Q92575 508 aa11.24□□□□□ -0.61
SCFD1-206ENST00000484733 RSC1A1Q92681 617 aa11.24□□□□□ -0.61
SCFD1-206ENST00000484733 SLC41A2Q96JW4 573 aa11.24□□□□□ -0.61
SCFD1-206ENST00000484733 ZNF514Q96K75 400 aaPredicted RBP11.24□□□□□ -0.61
SCFD1-206ENST00000484733 TTC25Q96NG3 672 aa11.24□□□□□ -0.61
SCFD1-206ENST00000484733 OR6C1Q96RD1 312 aa11.24□□□□□ -0.61
SCFD1-206ENST00000484733 C19orf43Q9BQ61 176 aa11.24□□□□□ -0.61
SCFD1-206ENST00000484733 ULBP3Q9BZM4 244 aa11.24□□□□□ -0.61
SCFD1-206ENST00000484733 ANAPC2Q9UJX6 822 aa11.24□□□□□ -0.61
SCFD1-206ENST00000484733 PKP3Q9Y446 797 aa11.24□□□□□ -0.61
SCFD1-206ENST00000484733 PCDHGA6Q9Y5G7 932 aa11.24□□□□□ -0.61
SCFD1-206ENST00000484733 TENM4Q6N022 2769 aa11.23□□□□□ -0.61
SCFD1-206ENST00000484733 ARHGAP6O43182 974 aa11.23□□□□□ -0.61
SCFD1-206ENST00000484733 SPAG6O75602 509 aa11.23□□□□□ -0.61
SCFD1-206ENST00000484733 NDUFA10O95299 355 aa11.23□□□□□ -0.61
SCFD1-206ENST00000484733 MT-ND3P03897 115 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 527.7 ms