RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 RAB15P59190 212 aa9.56□□□□□ -0.88
TMEM39A-207ENST00000482162 OTUD4Q01804 1114 aaKnown RBP9.56□□□□□ -0.88
TMEM39A-207ENST00000482162 NFATC2Q13469 925 aa9.56□□□□□ -0.88
TMEM39A-207ENST00000482162 CLCA4Q14CN2 919 aa9.56□□□□□ -0.88
TMEM39A-207ENST00000482162 ANKRD20A2Q5SQ80 823 aa9.56□□□□□ -0.88
TMEM39A-207ENST00000482162 ANKRD20A1Q5TYW2 823 aa9.56□□□□□ -0.88
TMEM39A-207ENST00000482162 ANKRD20A3Q5VUR7 823 aa9.56□□□□□ -0.88
TMEM39A-207ENST00000482162 CRTC3Q6UUV7 619 aa9.56□□□□□ -0.88
TMEM39A-207ENST00000482162 RBM12BQ8IXT5 1001 aaKnown RBP9.56□□□□□ -0.88
TMEM39A-207ENST00000482162 RASGEF1AQ8N9B8 481 aa9.56□□□□□ -0.88
TMEM39A-207ENST00000482162 EXD3Q8N9H8 876 aa9.56□□□□□ -0.88
TMEM39A-207ENST00000482162 CCDC112Q8NEF3 446 aa9.56□□□□□ -0.88
TMEM39A-207ENST00000482162 IPMKQ8NFU5 416 aa9.56□□□□□ -0.88
TMEM39A-207ENST00000482162 NCSTNQ92542 709 aa9.56□□□□□ -0.88
TMEM39A-207ENST00000482162 ART4Q93070 314 aa9.56□□□□□ -0.88
TMEM39A-207ENST00000482162 RTP4Q96DX8 246 aa9.56□□□□□ -0.88
TMEM39A-207ENST00000482162 TEFMQ96QE5 360 aaKnown RBP9.56□□□□□ -0.88
TMEM39A-207ENST00000482162 TBC1D10AQ9BXI6 508 aa9.56□□□□□ -0.88
TMEM39A-207ENST00000482162 SLC12A9Q9BXP2 914 aa9.56□□□□□ -0.88
TMEM39A-207ENST00000482162 STN1Q9H668 368 aaKnown RBP9.56□□□□□ -0.88
TMEM39A-207ENST00000482162 C10orf88Q9H8K7 445 aa9.56□□□□□ -0.88
TMEM39A-207ENST00000482162 UGT1A7Q9HAW7 530 aa9.56□□□□□ -0.88
TMEM39A-207ENST00000482162 UGT1A10Q9HAW8 530 aa9.56□□□□□ -0.88
TMEM39A-207ENST00000482162 UGT1A8Q9HAW9 530 aa9.56□□□□□ -0.88
TMEM39A-207ENST00000482162 BPIFA1Q9NP55 256 aa9.56□□□□□ -0.88
TMEM39A-207ENST00000482162 POT1Q9NUX5 634 aa9.56□□□□□ -0.88
TMEM39A-207ENST00000482162 SLC39A1Q9NY26 324 aa9.56□□□□□ -0.88
TMEM39A-207ENST00000482162 RSPH14Q9UHP6 348 aa9.56□□□□□ -0.88
TMEM39A-207ENST00000482162 WDR37Q9Y2I8 494 aa9.56□□□□□ -0.88
TMEM39A-207ENST00000482162 AAR2Q9Y312 384 aaKnown RBP9.56□□□□□ -0.88
TMEM39A-207ENST00000482162 TMEM184BQ9Y519 407 aaPredicted RBP9.56□□□□□ -0.88
TMEM39A-207ENST00000482162 PCDHB11Q9Y5F2 797 aa9.56□□□□□ -0.88
TMEM39A-207ENST00000482162 PCDHGA4Q9Y5G9 962 aa9.56□□□□□ -0.88
TMEM39A-207ENST00000482162 GLYATL1P3A0A0U1RQE8 302 aa9.55□□□□□ -0.88
TMEM39A-207ENST00000482162 EFCAB7A8K855 629 aa9.55□□□□□ -0.88
TMEM39A-207ENST00000482162 GOLGA6L6A8MZA4 724 aa9.55□□□□□ -0.88
TMEM39A-207ENST00000482162 POP7O75817 140 aaKnown RBP9.55□□□□□ -0.88
TMEM39A-207ENST00000482162 ZNF189O75820 626 aaPredicted RBP9.55□□□□□ -0.88
TMEM39A-207ENST00000482162 TJP3O95049 919 aa9.55□□□□□ -0.88
TMEM39A-207ENST00000482162 RBP3P10745 1247 aa9.55□□□□□ -0.88
TMEM39A-207ENST00000482162 LPOP22079 712 aaPredicted RBP9.55□□□□□ -0.88
TMEM39A-207ENST00000482162 IDSP22304 550 aa9.55□□□□□ -0.88
TMEM39A-207ENST00000482162 CTSCP53634 463 aa9.55□□□□□ -0.88
TMEM39A-207ENST00000482162 GEMP55040 296 aa9.55□□□□□ -0.88
TMEM39A-207ENST00000482162 EIF3EP60228 445 aaKnown RBP9.55□□□□□ -0.88
TMEM39A-207ENST00000482162 XIAPP98170 497 aa9.55□□□□□ -0.88
TMEM39A-207ENST00000482162 KLF1Q13351 362 aaPredicted RBP9.55□□□□□ -0.88
TMEM39A-207ENST00000482162 PTPRCAPQ14761 206 aa9.55□□□□□ -0.88
TMEM39A-207ENST00000482162 TAF1AQ15573 450 aaPredicted RBP9.55□□□□□ -0.88
TMEM39A-207ENST00000482162 TAF1BQ53T94 588 aaPredicted RBP9.55□□□□□ -0.88
TMEM39A-207ENST00000482162 MANEAQ5SRI9 462 aa9.55□□□□□ -0.88
TMEM39A-207ENST00000482162 LDLRAP1Q5SW96 308 aa9.55□□□□□ -0.88
TMEM39A-207ENST00000482162 DCAF12Q5T6F0 453 aa9.55□□□□□ -0.88
TMEM39A-207ENST00000482162 GPRC6AQ5T6X5 926 aa9.55□□□□□ -0.88
TMEM39A-207ENST00000482162 KIAA1614Q5VZ46 1190 aa9.55□□□□□ -0.88
TMEM39A-207ENST00000482162 METRNLQ641Q3 311 aa9.55□□□□□ -0.88
TMEM39A-207ENST00000482162 ANKS6Q68DC2 871 aa9.55□□□□□ -0.88
TMEM39A-207ENST00000482162 KCTD11Q693B1 232 aa9.55□□□□□ -0.88
TMEM39A-207ENST00000482162 ITPRIPL1Q6GPH6 555 aa9.55□□□□□ -0.88
TMEM39A-207ENST00000482162 AMZ2Q86W34 360 aa9.55□□□□□ -0.88
TMEM39A-207ENST00000482162 PLXDC1Q8IUK5 500 aa9.55□□□□□ -0.88
TMEM39A-207ENST00000482162 CCDC50Q8IVM0 306 aa9.55□□□□□ -0.88
TMEM39A-207ENST00000482162 SLC25A41Q8N5S1 370 aa9.55□□□□□ -0.88
TMEM39A-207ENST00000482162 ZNF398Q8TD17 642 aa9.55□□□□□ -0.88
TMEM39A-207ENST00000482162 ZFPM2Q8WW38 1151 aa9.55□□□□□ -0.88
TMEM39A-207ENST00000482162 KLHL6Q8WZ60 621 aa9.55□□□□□ -0.88
TMEM39A-207ENST00000482162 HAUS1Q96CS2 278 aa9.55□□□□□ -0.88
TMEM39A-207ENST00000482162 AHCYL2Q96HN2 611 aaKnown RBP9.55□□□□□ -0.88
TMEM39A-207ENST00000482162 ZNF514Q96K75 400 aaPredicted RBP9.55□□□□□ -0.88
TMEM39A-207ENST00000482162 LINC00615Q96LM1 132 aaPredicted RBP9.55□□□□□ -0.88
TMEM39A-207ENST00000482162 C9orf72Q96LT7 481 aa9.55□□□□□ -0.88
TMEM39A-207ENST00000482162 SPATA13Q96N96 652 aa9.55□□□□□ -0.88
TMEM39A-207ENST00000482162 ZPBPQ9BS86 351 aa9.55□□□□□ -0.88
TMEM39A-207ENST00000482162 FEZ2Q9UHY8 353 aaPredicted RBP9.55□□□□□ -0.88
TMEM39A-207ENST00000482162 PKP3Q9Y446 797 aa9.55□□□□□ -0.88
TMEM39A-207ENST00000482162 KLHL33A6NCF5 533 aa9.54□□□□□ -0.88
TMEM39A-207ENST00000482162 H7C0C1 242 aa9.54□□□□□ -0.88
TMEM39A-207ENST00000482162 DDX3YO15523 660 aaKnown RBP9.54□□□□□ -0.88
TMEM39A-207ENST00000482162 GPR39O43194 453 aa9.54□□□□□ -0.88
TMEM39A-207ENST00000482162 LDB2O43679 373 aa9.54□□□□□ -0.88
TMEM39A-207ENST00000482162 UBXN7O94888 489 aa9.54□□□□□ -0.88
TMEM39A-207ENST00000482162 IPO7O95373 1038 aaKnown RBP9.54□□□□□ -0.88
TMEM39A-207ENST00000482162 VIPP01282 170 aa9.54□□□□□ -0.88
TMEM39A-207ENST00000482162 SLC4A1P02730 911 aa9.54□□□□□ -0.88
TMEM39A-207ENST00000482162 ITGB6P18564 788 aa9.54□□□□□ -0.88
TMEM39A-207ENST00000482162 CDC25BP30305 580 aa9.54□□□□□ -0.88
TMEM39A-207ENST00000482162 ATP5OP48047 213 aa9.54□□□□□ -0.88
TMEM39A-207ENST00000482162 ITGA9Q13797 1035 aa9.54□□□□□ -0.88
TMEM39A-207ENST00000482162 LY6DQ14210 128 aa9.54□□□□□ -0.88
TMEM39A-207ENST00000482162 MAP7Q14244 749 aa9.54□□□□□ -0.88
TMEM39A-207ENST00000482162 INSCQ1MX18 579 aa9.54□□□□□ -0.88
TMEM39A-207ENST00000482162 ZNF658BQ4V348 819 aaPredicted RBP9.54□□□□□ -0.88
TMEM39A-207ENST00000482162 AADACL2Q6P093 401 aa9.54□□□□□ -0.88
TMEM39A-207ENST00000482162 FAM151BQ6UXP7 276 aa9.54□□□□□ -0.88
TMEM39A-207ENST00000482162 FAM83HQ6ZRV2 1179 aaPredicted RBP9.54□□□□□ -0.88
TMEM39A-207ENST00000482162 TIPARPQ7Z3E1 657 aaKnown RBP9.54□□□□□ -0.88
TMEM39A-207ENST00000482162 GLT6D1Q7Z4J2 308 aa9.54□□□□□ -0.88
TMEM39A-207ENST00000482162 VASH2Q86V25 355 aa9.54□□□□□ -0.88
TMEM39A-207ENST00000482162 CDKL3Q8IVW4 592 aaPredicted RBP9.54□□□□□ -0.88
TMEM39A-207ENST00000482162 ACRBPQ8NEB7 543 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms