RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 HYOU1Q9Y4L1 999 aa11.94□□□□□ -0.5
SQSTM1-207ENST00000481335 PCDHA13Q9Y5I0 950 aa11.94□□□□□ -0.5
SQSTM1-207ENST00000481335 SPO11Q9Y5K1 396 aa11.94□□□□□ -0.5
SQSTM1-207ENST00000481335 FLNBO75369 2602 aaKnown RBP11.93□□□□□ -0.5
SQSTM1-207ENST00000481335 GLYATL1P3A0A0U1RQE8 302 aa11.93□□□□□ -0.5
SQSTM1-207ENST00000481335 CCDC66A2RUB6 948 aa11.93□□□□□ -0.5
SQSTM1-207ENST00000481335 ZNF891A8MT65 544 aaPredicted RBP11.93□□□□□ -0.5
SQSTM1-207ENST00000481335 BTNL10A8MVZ5 291 aa11.93□□□□□ -0.5
SQSTM1-207ENST00000481335 AURKAO14965 403 aa11.93□□□□□ -0.5
SQSTM1-207ENST00000481335 POLR1CO15160 346 aaPredicted RBP11.93□□□□□ -0.5
SQSTM1-207ENST00000481335 PYGMP11217 842 aa11.93□□□□□ -0.5
SQSTM1-207ENST00000481335 FECHP22830 423 aa11.93□□□□□ -0.5
SQSTM1-207ENST00000481335 MPSTP25325 297 aa11.93□□□□□ -0.5
SQSTM1-207ENST00000481335 SLC19A1P41440 591 aa11.93□□□□□ -0.5
SQSTM1-207ENST00000481335 CAPZBP47756 277 aa11.93□□□□□ -0.5
SQSTM1-207ENST00000481335 PDE1BQ01064 536 aa11.93□□□□□ -0.5
SQSTM1-207ENST00000481335 MC1RQ01726 317 aa11.93□□□□□ -0.5
SQSTM1-207ENST00000481335 ABHD18Q0P651 414 aa11.93□□□□□ -0.5
SQSTM1-207ENST00000481335 SRSF6Q13247 344 aaKnown RBP11.93□□□□□ -0.5
SQSTM1-207ENST00000481335 IL11RAQ14626 422 aa11.93□□□□□ -0.5
SQSTM1-207ENST00000481335 PRSS42Q7Z5A4 293 aa11.93□□□□□ -0.5
SQSTM1-207ENST00000481335 GDAP1Q8TB36 358 aa11.93□□□□□ -0.5
SQSTM1-207ENST00000481335 EXTL1Q92935 676 aa11.93□□□□□ -0.5
SQSTM1-207ENST00000481335 PMEPA1Q969W9 287 aa11.93□□□□□ -0.5
SQSTM1-207ENST00000481335 LRRC45Q96CN5 670 aa11.93□□□□□ -0.5
SQSTM1-207ENST00000481335 OXNAD1Q96HP4 312 aaPredicted RBP11.93□□□□□ -0.5
SQSTM1-207ENST00000481335 C9orf72Q96LT7 481 aa11.93□□□□□ -0.5
SQSTM1-207ENST00000481335 TBC1D10AQ9BXI6 508 aa11.93□□□□□ -0.5
SQSTM1-207ENST00000481335 ZNF768Q9H5H4 540 aaKnown RBP11.93□□□□□ -0.5
SQSTM1-207ENST00000481335 SLC40A1Q9NP59 571 aa11.93□□□□□ -0.5
SQSTM1-207ENST00000481335 IL26Q9NPH9 171 aa11.93□□□□□ -0.5
SQSTM1-207ENST00000481335 STARD5Q9NSY2 213 aa11.93□□□□□ -0.5
SQSTM1-207ENST00000481335 SIDT1Q9NXL6 827 aaKnown RBP11.93□□□□□ -0.5
SQSTM1-207ENST00000481335 UBP1Q9NZI7 540 aa11.93□□□□□ -0.5
SQSTM1-207ENST00000481335 ZNF624Q9P2J8 865 aaPredicted RBP11.93□□□□□ -0.5
SQSTM1-207ENST00000481335 SLC23A2Q9UGH3 650 aa11.93□□□□□ -0.5
SQSTM1-207ENST00000481335 RSPH14Q9UHP6 348 aa11.93□□□□□ -0.5
SQSTM1-207ENST00000481335 AAR2Q9Y312 384 aaKnown RBP11.93□□□□□ -0.5
SQSTM1-207ENST00000481335 TENM4Q6N022 2769 aa11.92□□□□□ -0.5
SQSTM1-207ENST00000481335 A8MU76 341 aa11.92□□□□□ -0.5
SQSTM1-207ENST00000481335 AGRPO00253 132 aa11.92□□□□□ -0.5
SQSTM1-207ENST00000481335 STK10O94804 968 aaKnown RBP11.92□□□□□ -0.5
SQSTM1-207ENST00000481335 NDUFA10O95299 355 aa11.92□□□□□ -0.5
SQSTM1-207ENST00000481335 LIFP15018 202 aa11.92□□□□□ -0.5
SQSTM1-207ENST00000481335 BRAFP15056 766 aa11.92□□□□□ -0.5
SQSTM1-207ENST00000481335 AMD1P17707 334 aa11.92□□□□□ -0.5
SQSTM1-207ENST00000481335 CETN2P41208 172 aa11.92□□□□□ -0.5
SQSTM1-207ENST00000481335 MAPK9P45984 424 aa11.92□□□□□ -0.5
SQSTM1-207ENST00000481335 ADCY2Q08462 1091 aa11.92□□□□□ -0.5
SQSTM1-207ENST00000481335 TBR1Q16650 682 aa11.92□□□□□ -0.5
SQSTM1-207ENST00000481335 LONRF2Q1L5Z9 754 aa11.92□□□□□ -0.5
SQSTM1-207ENST00000481335 PLA2G4EQ3MJ16 856 aa11.92□□□□□ -0.5
SQSTM1-207ENST00000481335 KHDC1Q4VXA5 237 aaKnown RBP11.92□□□□□ -0.5
SQSTM1-207ENST00000481335 SNAP47Q5SQN1 464 aa11.92□□□□□ -0.5
SQSTM1-207ENST00000481335 CCDC181Q5TID7 509 aa11.92□□□□□ -0.5
SQSTM1-207ENST00000481335 KLHL35Q6PF15 583 aa11.92□□□□□ -0.5
SQSTM1-207ENST00000481335 BORAQ6PGQ7 559 aa11.92□□□□□ -0.5
SQSTM1-207ENST00000481335 AMZ2Q86W34 360 aa11.92□□□□□ -0.5
SQSTM1-207ENST00000481335 TMTC1Q8IUR5 882 aa11.92□□□□□ -0.5
SQSTM1-207ENST00000481335 CDKL3Q8IVW4 592 aaPredicted RBP11.92□□□□□ -0.5
SQSTM1-207ENST00000481335 ESX1Q8N693 406 aa11.92□□□□□ -0.5
SQSTM1-207ENST00000481335 BEND7Q8N7W2 519 aaPredicted RBP11.92□□□□□ -0.5
SQSTM1-207ENST00000481335 IPMKQ8NFU5 416 aa11.92□□□□□ -0.5
SQSTM1-207ENST00000481335 BLOC1S5Q8TDH9 187 aa11.92□□□□□ -0.5
SQSTM1-207ENST00000481335 CXorf40BQ96DE9 158 aa11.92□□□□□ -0.5
SQSTM1-207ENST00000481335 ZDHHC12Q96GR4 267 aa11.92□□□□□ -0.5
SQSTM1-207ENST00000481335 MRFAP1L1Q96HT8 127 aa11.92□□□□□ -0.5
SQSTM1-207ENST00000481335 BPIFA1Q9NP55 256 aa11.92□□□□□ -0.5
SQSTM1-207ENST00000481335 ARFGAP3Q9NP61 516 aa11.92□□□□□ -0.5
SQSTM1-207ENST00000481335 GEMIN8Q9NWZ8 242 aaKnown RBP11.92□□□□□ -0.5
SQSTM1-207ENST00000481335 OGFRQ9NZT2 677 aa11.92□□□□□ -0.5
SQSTM1-207ENST00000481335 SCHIP1Q9P0W5 487 aaPredicted RBP11.92□□□□□ -0.5
SQSTM1-207ENST00000481335 FEZ2Q9UHY8 353 aaPredicted RBP11.92□□□□□ -0.5
SQSTM1-207ENST00000481335 TMPRSS11EQ9UL52 423 aa11.92□□□□□ -0.5
SQSTM1-207ENST00000481335 DNAJC16Q9Y2G8 782 aa11.92□□□□□ -0.5
SQSTM1-207ENST00000481335 PCDHA3Q9Y5H8 950 aa11.92□□□□□ -0.5
SQSTM1-207ENST00000481335 HEMK1Q9Y5R4 338 aaPredicted RBP11.92□□□□□ -0.5
SQSTM1-207ENST00000481335 MYO18BQ8IUG5 2567 aa11.92□□□□□ -0.5
SQSTM1-207ENST00000481335 GOLGA6L3A6NEY3 463 aa11.91□□□□□ -0.5
SQSTM1-207ENST00000481335 C5orf60A6NFR6 353 aa11.91□□□□□ -0.5
SQSTM1-207ENST00000481335 C2orf81A6NN90 581 aa11.91□□□□□ -0.5
SQSTM1-207ENST00000481335 H7C0C1 242 aa11.91□□□□□ -0.5
SQSTM1-207ENST00000481335 STX7O15400 261 aaKnown RBP11.91□□□□□ -0.5
SQSTM1-207ENST00000481335 PJA2O43164 708 aa11.91□□□□□ -0.5
SQSTM1-207ENST00000481335 MTX2O75431 263 aa11.91□□□□□ -0.5
SQSTM1-207ENST00000481335 STK17BO94768 372 aa11.91□□□□□ -0.5
SQSTM1-207ENST00000481335 DLGAP3O95886 979 aa11.91□□□□□ -0.5
SQSTM1-207ENST00000481335 WT1P19544 449 aaPredicted RBP11.91□□□□□ -0.5
SQSTM1-207ENST00000481335 CTNNA2P26232 953 aa11.91□□□□□ -0.5
SQSTM1-207ENST00000481335 CHRNA4P43681 627 aa11.91□□□□□ -0.5
SQSTM1-207ENST00000481335 ATP5OP48047 213 aa11.91□□□□□ -0.5
SQSTM1-207ENST00000481335 MARCKSL1P49006 195 aa11.91□□□□□ -0.5
SQSTM1-207ENST00000481335 PRPSAP1Q14558 356 aa11.91□□□□□ -0.5
SQSTM1-207ENST00000481335 TAF1AQ15573 450 aaPredicted RBP11.91□□□□□ -0.5
SQSTM1-207ENST00000481335 ZNF648Q5T619 568 aaPredicted RBP11.91□□□□□ -0.5
SQSTM1-207ENST00000481335 FAM151BQ6UXP7 276 aa11.91□□□□□ -0.5
SQSTM1-207ENST00000481335 B4GALNT4Q76KP1 1039 aa11.91□□□□□ -0.5
SQSTM1-207ENST00000481335 CARFQ8N187 725 aa11.91□□□□□ -0.5
SQSTM1-207ENST00000481335 TXLNBQ8N3L3 684 aa11.91□□□□□ -0.5
SQSTM1-207ENST00000481335 EXD3Q8N9H8 876 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms