RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 NAT6Q93015 286 aa10.67□□□□□ -0.7
ATG4B-219ENST00000479941 SGF29Q96ES7 293 aa10.67□□□□□ -0.7
ATG4B-219ENST00000479941 LINC00615Q96LM1 132 aaPredicted RBP10.67□□□□□ -0.7
ATG4B-219ENST00000479941 NAT9Q9BTE0 207 aa10.67□□□□□ -0.7
ATG4B-219ENST00000479941 CATSPERZQ9NTU4 200 aa10.67□□□□□ -0.7
ATG4B-219ENST00000479941 TOR4AQ9NXH8 423 aa10.67□□□□□ -0.7
ATG4B-219ENST00000479941 WHRNQ9P202 907 aa10.67□□□□□ -0.7
ATG4B-219ENST00000479941 GULP1Q9UBP9 304 aa10.67□□□□□ -0.7
ATG4B-219ENST00000479941 KCNK6Q9Y257 313 aa10.67□□□□□ -0.7
ATG4B-219ENST00000479941 MAD1L1Q9Y6D9 718 aa10.67□□□□□ -0.7
ATG4B-219ENST00000479941 RPS6KL1Q9Y6S9 549 aa10.67□□□□□ -0.7
ATG4B-219ENST00000479941 U3KQA8 63 aa10.67□□□□□ -0.7
ATG4B-219ENST00000479941 B4DGG1 531 aa10.66□□□□□ -0.7
ATG4B-219ENST00000479941 F8W8V4 182 aa10.66□□□□□ -0.7
ATG4B-219ENST00000479941 PFDN6O15212 129 aa10.66□□□□□ -0.7
ATG4B-219ENST00000479941 CD3EAPO15446 510 aaKnown RBP10.66□□□□□ -0.7
ATG4B-219ENST00000479941 NOBOXO60393 691 aa10.66□□□□□ -0.7
ATG4B-219ENST00000479941 RFPL3O75679 317 aa10.66□□□□□ -0.7
ATG4B-219ENST00000479941 POP7O75817 140 aaKnown RBP10.66□□□□□ -0.7
ATG4B-219ENST00000479941 AP2A2O94973 939 aa10.66□□□□□ -0.7
ATG4B-219ENST00000479941 VAPBO95292 243 aa10.66□□□□□ -0.7
ATG4B-219ENST00000479941 TTC4O95801 387 aa10.66□□□□□ -0.7
ATG4B-219ENST00000479941 POLBP06746 335 aa10.66□□□□□ -0.7
ATG4B-219ENST00000479941 SLC2A4P14672 509 aa10.66□□□□□ -0.7
ATG4B-219ENST00000479941 PGAM1P18669 254 aa10.66□□□□□ -0.7
ATG4B-219ENST00000479941 IDSP22304 550 aa10.66□□□□□ -0.7
ATG4B-219ENST00000479941 RPL21P46778 160 aaKnown RBP10.66□□□□□ -0.7
ATG4B-219ENST00000479941 ARCN1P48444 511 aaKnown RBP10.66□□□□□ -0.7
ATG4B-219ENST00000479941 TTPAP49638 278 aa10.66□□□□□ -0.7
ATG4B-219ENST00000479941 PRLHRP49683 370 aa10.66□□□□□ -0.7
ATG4B-219ENST00000479941 DRG2P55039 364 aaKnown RBP10.66□□□□□ -0.7
ATG4B-219ENST00000479941 ARL4CP56559 192 aa10.66□□□□□ -0.7
ATG4B-219ENST00000479941 MRPS25P82663 173 aaKnown RBP10.66□□□□□ -0.7
ATG4B-219ENST00000479941 CAV1Q03135 178 aa10.66□□□□□ -0.7
ATG4B-219ENST00000479941 DHX9Q08211 1270 aaKnown RBP10.66□□□□□ -0.7
ATG4B-219ENST00000479941 DMPKQ09013 629 aa10.66□□□□□ -0.7
ATG4B-219ENST00000479941 HIF1AQ16665 826 aa10.66□□□□□ -0.7
ATG4B-219ENST00000479941 PLA2G4EQ3MJ16 856 aa10.66□□□□□ -0.7
ATG4B-219ENST00000479941 ANKRD20A4Q4UJ75 823 aa10.66□□□□□ -0.7
ATG4B-219ENST00000479941 C14orf28Q4W4Y0 310 aa10.66□□□□□ -0.7
ATG4B-219ENST00000479941 FNBP1LQ5T0N5 605 aa10.66□□□□□ -0.7
ATG4B-219ENST00000479941 N4BP2L1Q5TBK1 243 aaPredicted RBP10.66□□□□□ -0.7
ATG4B-219ENST00000479941 MRNIPQ6NTE8 343 aa10.66□□□□□ -0.7
ATG4B-219ENST00000479941 CES3Q6UWW8 571 aa10.66□□□□□ -0.7
ATG4B-219ENST00000479941 PACS1Q6VY07 963 aa10.66□□□□□ -0.7
ATG4B-219ENST00000479941 SLCO6A1Q86UG4 719 aa10.66□□□□□ -0.7
ATG4B-219ENST00000479941 C17orf82Q86X59 251 aaPredicted RBP10.66□□□□□ -0.7
ATG4B-219ENST00000479941 NAGSQ8N159 534 aa10.66□□□□□ -0.7
ATG4B-219ENST00000479941 MMGT1Q8N4V1 131 aa10.66□□□□□ -0.7
ATG4B-219ENST00000479941 CEP112Q8N8E3 955 aa10.66□□□□□ -0.7
ATG4B-219ENST00000479941 KYQ8NBH2 561 aa10.66□□□□□ -0.7
ATG4B-219ENST00000479941 ZNF669Q96BR6 464 aaPredicted RBP10.66□□□□□ -0.7
ATG4B-219ENST00000479941 LRRC39Q96DD0 335 aa10.66□□□□□ -0.7
ATG4B-219ENST00000479941 STAMBPL1Q96FJ0 436 aa10.66□□□□□ -0.7
ATG4B-219ENST00000479941 EBNA1BP2Q99848 306 aaKnown RBP10.66□□□□□ -0.7
ATG4B-219ENST00000479941 DPH5Q9H2P9 285 aa10.66□□□□□ -0.7
ATG4B-219ENST00000479941 VPS37BQ9H9H4 285 aa10.66□□□□□ -0.7
ATG4B-219ENST00000479941 SIRPGQ9P1W8 387 aa10.66□□□□□ -0.7
ATG4B-219ENST00000479941 SLC23A2Q9UGH3 650 aa10.66□□□□□ -0.7
ATG4B-219ENST00000479941 PADI4Q9UM07 663 aa10.66□□□□□ -0.7
ATG4B-219ENST00000479941 ARHGEF17Q96PE2 2063 aaPredicted RBP10.65□□□□□ -0.7
ATG4B-219ENST00000479941 PLXNB3Q9ULL4 1909 aa10.65□□□□□ -0.7
ATG4B-219ENST00000479941 ZCWPW2A0A1B0GU75 182 aa10.65□□□□□ -0.7
ATG4B-219ENST00000479941 C17orf113A0A1B0GUU1 675 aa10.65□□□□□ -0.7
ATG4B-219ENST00000479941 CPED1A4D0V7 1026 aa10.65□□□□□ -0.7
ATG4B-219ENST00000479941 MGAT4DA6NG13 374 aa10.65□□□□□ -0.7
ATG4B-219ENST00000479941 PRR19A6NJB7 356 aa10.65□□□□□ -0.7
ATG4B-219ENST00000479941 OR5K4A6NMS3 321 aa10.65□□□□□ -0.7
ATG4B-219ENST00000479941 TP73O15350 636 aa10.65□□□□□ -0.7
ATG4B-219ENST00000479941 SGTAO43765 313 aa10.65□□□□□ -0.7
ATG4B-219ENST00000479941 NUDT21O43809 227 aaKnown RBP10.65□□□□□ -0.7
ATG4B-219ENST00000479941 GSTM1P09488 218 aa10.65□□□□□ -0.7
ATG4B-219ENST00000479941 OR56A5P0C7T3 313 aa10.65□□□□□ -0.7
ATG4B-219ENST00000479941 MYF5P13349 255 aa10.65□□□□□ -0.7
ATG4B-219ENST00000479941 F3P13726 295 aa10.65□□□□□ -0.7
ATG4B-219ENST00000479941 PNLIPP16233 465 aa10.65□□□□□ -0.7
ATG4B-219ENST00000479941 GLB1P16278 677 aa10.65□□□□□ -0.7
ATG4B-219ENST00000479941 ARNTP27540 789 aa10.65□□□□□ -0.7
ATG4B-219ENST00000479941 PMLP29590 882 aa10.65□□□□□ -0.7
ATG4B-219ENST00000479941 E2F1Q01094 437 aa10.65□□□□□ -0.7
ATG4B-219ENST00000479941 GSTM4Q03013 218 aa10.65□□□□□ -0.7
ATG4B-219ENST00000479941 CBLBQ13191 982 aa10.65□□□□□ -0.7
ATG4B-219ENST00000479941 HLTFQ14527 1009 aaKnown RBP eCLIP10.65□□□□□ -0.7
ATG4B-219ENST00000479941 LONRF1Q17RB8 773 aa10.65□□□□□ -0.7
ATG4B-219ENST00000479941 BBS9Q3SYG4 887 aa10.65□□□□□ -0.7
ATG4B-219ENST00000479941 MSS51Q4VC12 460 aa10.65□□□□□ -0.7
ATG4B-219ENST00000479941 GLE1Q53GS7 698 aaKnown RBP10.65□□□□□ -0.7
ATG4B-219ENST00000479941 WASH2PQ6VEQ5 465 aa10.65□□□□□ -0.7
ATG4B-219ENST00000479941 DET1Q7L5Y6 550 aa10.65□□□□□ -0.7
ATG4B-219ENST00000479941 SDCCAG8Q86SQ7 713 aaPredicted RBP10.65□□□□□ -0.7
ATG4B-219ENST00000479941 LMNTD2Q8IXW0 634 aa10.65□□□□□ -0.7
ATG4B-219ENST00000479941 AGGF1Q8N302 714 aaeCLIP10.65□□□□□ -0.7
ATG4B-219ENST00000479941 SFRP1Q8N474 314 aa10.65□□□□□ -0.7
ATG4B-219ENST00000479941 ARL14Q8N4G2 192 aa10.65□□□□□ -0.7
ATG4B-219ENST00000479941 BEND7Q8N7W2 519 aaPredicted RBP10.65□□□□□ -0.7
ATG4B-219ENST00000479941 OR2L2Q8NH16 312 aa10.65□□□□□ -0.7
ATG4B-219ENST00000479941 IFI44Q8TCB0 444 aa10.65□□□□□ -0.7
ATG4B-219ENST00000479941 ADAMTS14Q8WXS8 1223 aa10.65□□□□□ -0.7
ATG4B-219ENST00000479941 TCF12Q99081 682 aa10.65□□□□□ -0.7
ATG4B-219ENST00000479941 LRRC1Q9BTT6 524 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms