RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 MYLK3Q32MK0 819 aa7.33□□□□□ -1.24
GAPVD1-217ENST00000479511 C6orf136Q5SQH8 315 aa7.33□□□□□ -1.24
GAPVD1-217ENST00000479511 TTC39AQ5SRH9 613 aa7.33□□□□□ -1.24
GAPVD1-217ENST00000479511 TMEM71Q6P5X7 295 aa7.33□□□□□ -1.24
GAPVD1-217ENST00000479511 TUBA3EQ6PEY2 450 aa7.33□□□□□ -1.24
GAPVD1-217ENST00000479511 PAPD4Q6PIY7 484 aaKnown RBP7.33□□□□□ -1.24
GAPVD1-217ENST00000479511 INTS8Q75QN2 995 aaKnown RBP7.33□□□□□ -1.24
GAPVD1-217ENST00000479511 TRILQ7L0X0 811 aa7.33□□□□□ -1.24
GAPVD1-217ENST00000479511 CATSPER4Q7RTX7 472 aa7.33□□□□□ -1.24
GAPVD1-217ENST00000479511 ERC1Q8IUD2 1116 aa7.33□□□□□ -1.24
GAPVD1-217ENST00000479511 MFN1Q8IWA4 741 aa7.33□□□□□ -1.24
GAPVD1-217ENST00000479511 GALNT16Q8N428 558 aa7.33□□□□□ -1.24
GAPVD1-217ENST00000479511 PNLDC1Q8NA58 520 aaKnown RBP7.33□□□□□ -1.24
GAPVD1-217ENST00000479511 NHLRC2Q8NBF2 726 aa7.33□□□□□ -1.24
GAPVD1-217ENST00000479511 LILRB1Q8NHL6 650 aaPredicted RBP7.33□□□□□ -1.24
GAPVD1-217ENST00000479511 IGFBPL1Q8WX77 278 aa7.33□□□□□ -1.24
GAPVD1-217ENST00000479511 MAP4K1Q92918 833 aa7.33□□□□□ -1.24
GAPVD1-217ENST00000479511 MSI2Q96DH6 328 aaKnown RBP7.33□□□□□ -1.24
GAPVD1-217ENST00000479511 THAP9Q9H5L6 903 aa7.33□□□□□ -1.24
GAPVD1-217ENST00000479511 ABCB8Q9NUT2 735 aa7.33□□□□□ -1.24
GAPVD1-217ENST00000479511 CNIH4Q9P003 139 aa7.33□□□□□ -1.24
GAPVD1-217ENST00000479511 SLC9A2Q9UBY0 812 aa7.33□□□□□ -1.24
GAPVD1-217ENST00000479511 STON1Q9Y6Q2 735 aa7.33□□□□□ -1.24
GAPVD1-217ENST00000479511 CHD2O14647 1828 aaKnown RBP7.33□□□□□ -1.24
GAPVD1-217ENST00000479511 ARHGAP31Q2M1Z3 1444 aa7.33□□□□□ -1.24
GAPVD1-217ENST00000479511 TMEM8BA6NDV4 472 aa7.32□□□□□ -1.24
GAPVD1-217ENST00000479511 FAM86B1E9PN63 330 aa7.32□□□□□ -1.24
GAPVD1-217ENST00000479511 TRIM77I1YAP6 450 aa7.32□□□□□ -1.24
GAPVD1-217ENST00000479511 INO80B-WBP1J3KQ70 363 aa7.32□□□□□ -1.24
GAPVD1-217ENST00000479511 ZBTB14O43829 449 aa7.32□□□□□ -1.24
GAPVD1-217ENST00000479511 FAM86B2P0C5J1 330 aa7.32□□□□□ -1.24
GAPVD1-217ENST00000479511 CBSLP0DN79 551 aa7.32□□□□□ -1.24
GAPVD1-217ENST00000479511 CYP11B2P19099 503 aa7.32□□□□□ -1.24
GAPVD1-217ENST00000479511 HOXC9P31274 260 aa7.32□□□□□ -1.24
GAPVD1-217ENST00000479511 PCGF2P35227 344 aa7.32□□□□□ -1.24
GAPVD1-217ENST00000479511 CBSP35520 551 aa7.32□□□□□ -1.24
GAPVD1-217ENST00000479511 AVPR1BP47901 424 aa7.32□□□□□ -1.24
GAPVD1-217ENST00000479511 KCNJ1P48048 391 aa7.32□□□□□ -1.24
GAPVD1-217ENST00000479511 RARRES1P49788 294 aa7.32□□□□□ -1.24
GAPVD1-217ENST00000479511 ADARP55265 1226 aaKnown RBP7.32□□□□□ -1.24
GAPVD1-217ENST00000479511 LAMB3Q13751 1172 aa7.32□□□□□ -1.24
GAPVD1-217ENST00000479511 SLC39A12Q504Y0 691 aa7.32□□□□□ -1.24
GAPVD1-217ENST00000479511 ABI3BPQ7Z7G0 1075 aa7.32□□□□□ -1.24
GAPVD1-217ENST00000479511 HSCBQ8IWL3 235 aa7.32□□□□□ -1.24
GAPVD1-217ENST00000479511 SPATA6LQ8N4H0 392 aa7.32□□□□□ -1.24
GAPVD1-217ENST00000479511 OCC1Q8TAD7 63 aa7.32□□□□□ -1.24
GAPVD1-217ENST00000479511 CEP76Q8TAP6 659 aa7.32□□□□□ -1.24
GAPVD1-217ENST00000479511 EME1Q96AY2 570 aa7.32□□□□□ -1.24
GAPVD1-217ENST00000479511 CLMNQ96JQ2 1002 aa7.32□□□□□ -1.24
GAPVD1-217ENST00000479511 MSTO1Q9BUK6 570 aa7.32□□□□□ -1.24
GAPVD1-217ENST00000479511 FZD8Q9H461 694 aa7.32□□□□□ -1.24
GAPVD1-217ENST00000479511 MRPL44Q9H9J2 332 aaKnown RBP7.32□□□□□ -1.24
GAPVD1-217ENST00000479511 ACSS1Q9NUB1 689 aaPredicted RBP7.32□□□□□ -1.24
GAPVD1-217ENST00000479511 SEPT10Q9P0V9 454 aa7.32□□□□□ -1.24
GAPVD1-217ENST00000479511 OR14J1Q9UGF5 321 aa7.32□□□□□ -1.24
GAPVD1-217ENST00000479511 CDH7Q9ULB5 785 aa7.32□□□□□ -1.24
GAPVD1-217ENST00000479511 GLI3P10071 1580 aa7.32□□□□□ -1.24
GAPVD1-217ENST00000479511 MARF1Q9Y4F3 1742 aaKnown RBP7.32□□□□□ -1.24
GAPVD1-217ENST00000479511 GRID2IPA4D2P6 1211 aa7.31□□□□□ -1.24
GAPVD1-217ENST00000479511 H0YIN7 160 aa7.31□□□□□ -1.24
GAPVD1-217ENST00000479511 MAP2K7O14733 419 aa7.31□□□□□ -1.24
GAPVD1-217ENST00000479511 GH2P01242 217 aa7.31□□□□□ -1.24
GAPVD1-217ENST00000479511 PTMAP06454 111 aaKnown RBP7.31□□□□□ -1.24
GAPVD1-217ENST00000479511 VPREB1P12018 145 aa7.31□□□□□ -1.24
GAPVD1-217ENST00000479511 UBA1P22314 1058 aaKnown RBP7.31□□□□□ -1.24
GAPVD1-217ENST00000479511 NMBRP28336 390 aa7.31□□□□□ -1.24
GAPVD1-217ENST00000479511 PTPRCAPQ14761 206 aa7.31□□□□□ -1.24
GAPVD1-217ENST00000479511 MIDNQ504T8 468 aa7.31□□□□□ -1.24
GAPVD1-217ENST00000479511 NSUN5P2Q63ZY6 315 aa7.31□□□□□ -1.24
GAPVD1-217ENST00000479511 FAM91A1Q658Y4 838 aa7.31□□□□□ -1.24
GAPVD1-217ENST00000479511 SIGIRRQ6IA17 410 aa7.31□□□□□ -1.24
GAPVD1-217ENST00000479511 TMEM270Q6UE05 265 aa7.31□□□□□ -1.24
GAPVD1-217ENST00000479511 GRASPQ7Z6J2 395 aaPredicted RBP7.31□□□□□ -1.24
GAPVD1-217ENST00000479511 RBFAQ8N0V3 343 aa7.31□□□□□ -1.24
GAPVD1-217ENST00000479511 TTC9BQ8N6N2 239 aa7.31□□□□□ -1.24
GAPVD1-217ENST00000479511 TEX9Q8N6V9 391 aa7.31□□□□□ -1.24
GAPVD1-217ENST00000479511 KDM1BQ8NB78 822 aa7.31□□□□□ -1.24
GAPVD1-217ENST00000479511 SPATA20Q8TB22 786 aa7.31□□□□□ -1.24
GAPVD1-217ENST00000479511 CAGE1Q8TC20 777 aa7.31□□□□□ -1.24
GAPVD1-217ENST00000479511 HM13Q8TCT9 377 aa7.31□□□□□ -1.24
GAPVD1-217ENST00000479511 GPT2Q8TD30 523 aa7.31□□□□□ -1.24
GAPVD1-217ENST00000479511 ATP6V0A1Q93050 837 aa7.31□□□□□ -1.24
GAPVD1-217ENST00000479511 EXT2Q93063 718 aa7.31□□□□□ -1.24
GAPVD1-217ENST00000479511 KATNB1Q9BVA0 655 aa7.31□□□□□ -1.24
GAPVD1-217ENST00000479511 UTP14AQ9BVJ6 771 aaKnown RBP7.31□□□□□ -1.24
GAPVD1-217ENST00000479511 CYP4F11Q9HBI6 524 aa7.31□□□□□ -1.24
GAPVD1-217ENST00000479511 RNF146Q9NTX7 359 aa7.31□□□□□ -1.24
GAPVD1-217ENST00000479511 ZNF541Q9H0D2 1346 aa7.3□□□□□ -1.24
GAPVD1-217ENST00000479511 F8W810 466 aa7.3□□□□□ -1.24
GAPVD1-217ENST00000479511 ASAP2O43150 1006 aa7.3□□□□□ -1.24
GAPVD1-217ENST00000479511 EEF2P13639 858 aaKnown RBP7.3□□□□□ -1.24
GAPVD1-217ENST00000479511 NR2F2P24468 414 aa7.3□□□□□ -1.24
GAPVD1-217ENST00000479511 AZGP1P25311 298 aaKnown RBP7.3□□□□□ -1.24
GAPVD1-217ENST00000479511 EIF2S3P41091 472 aaKnown RBP7.3□□□□□ -1.24
GAPVD1-217ENST00000479511 METAP2P50579 478 aaKnown RBP eCLIP7.3□□□□□ -1.24
GAPVD1-217ENST00000479511 CBX3Q13185 183 aa7.3□□□□□ -1.24
GAPVD1-217ENST00000479511 SMN1Q16637 294 aaKnown RBP7.3□□□□□ -1.24
GAPVD1-217ENST00000479511 EIF2S3LQ2VIR3 472 aaKnown RBP7.3□□□□□ -1.24
GAPVD1-217ENST00000479511 TTC31Q49AM3 519 aaPredicted RBP7.3□□□□□ -1.24
GAPVD1-217ENST00000479511 CERKLQ49MI3 558 aaPredicted RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms