RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 OR2A25A4D2G3 310 aa3.21□□□□□ -1.9
TARDBP-208ENST00000477447 ASPDHA6ND91 283 aa3.21□□□□□ -1.9
TARDBP-208ENST00000477447 KRTAP29-1A8MX34 341 aaPredicted RBP3.21□□□□□ -1.9
TARDBP-208ENST00000477447 C16orf97H3BN30 126 aa3.21□□□□□ -1.9
TARDBP-208ENST00000477447 J3QR06 171 aa3.21□□□□□ -1.9
TARDBP-208ENST00000477447 K7ENM7 598 aa3.21□□□□□ -1.9
TARDBP-208ENST00000477447 PLK4O00444 970 aa3.21□□□□□ -1.9
TARDBP-208ENST00000477447 PAPSS1O43252 624 aaPredicted RBP3.21□□□□□ -1.9
TARDBP-208ENST00000477447 STARD3NLO95772 234 aa3.21□□□□□ -1.9
TARDBP-208ENST00000477447 CETPP11597 493 aa3.21□□□□□ -1.9
TARDBP-208ENST00000477447 SAT1P21673 171 aa3.21□□□□□ -1.9
TARDBP-208ENST00000477447 EIF2DP41214 584 aaKnown RBP3.21□□□□□ -1.9
TARDBP-208ENST00000477447 FMO5P49326 533 aa3.21□□□□□ -1.9
TARDBP-208ENST00000477447 MMP14P50281 582 aa3.21□□□□□ -1.9
TARDBP-208ENST00000477447 SUOXP51687 545 aa3.21□□□□□ -1.9
TARDBP-208ENST00000477447 CTSCP53634 463 aa3.21□□□□□ -1.9
TARDBP-208ENST00000477447 EEF1A1P68104 462 aaKnown RBP3.21□□□□□ -1.9
TARDBP-208ENST00000477447 TMF1P82094 1093 aa3.21□□□□□ -1.9
TARDBP-208ENST00000477447 STK4Q13043 487 aa3.21□□□□□ -1.9
TARDBP-208ENST00000477447 KRT33BQ14525 404 aa3.21□□□□□ -1.9
TARDBP-208ENST00000477447 FAM76BQ5HYJ3 339 aa3.21□□□□□ -1.9
TARDBP-208ENST00000477447 SIRPB2Q5JXA9 342 aa3.21□□□□□ -1.9
TARDBP-208ENST00000477447 EEF1A1P5Q5VTE0 462 aa3.21□□□□□ -1.9
TARDBP-208ENST00000477447 TPRG1Q6ZUI0 275 aa3.21□□□□□ -1.9
TARDBP-208ENST00000477447 KCTD8Q6ZWB6 473 aa3.21□□□□□ -1.9
TARDBP-208ENST00000477447 Q75L30 129 aa3.21□□□□□ -1.9
TARDBP-208ENST00000477447 KBTBD6Q86V97 674 aa3.21□□□□□ -1.9
TARDBP-208ENST00000477447 LINC00346Q8IVM7 164 aa3.21□□□□□ -1.9
TARDBP-208ENST00000477447 CEP97Q8IW35 865 aa3.21□□□□□ -1.9
TARDBP-208ENST00000477447 MUC20Q8N307 709 aaPredicted RBP3.21□□□□□ -1.9
TARDBP-208ENST00000477447 RFLNBQ8N5W9 214 aa3.21□□□□□ -1.9
TARDBP-208ENST00000477447 GCSAMQ8N6F7 178 aa3.21□□□□□ -1.9
TARDBP-208ENST00000477447 OR52I2Q8NH67 350 aa3.21□□□□□ -1.9
TARDBP-208ENST00000477447 RSRC1Q96IZ7 334 aaKnown RBP3.21□□□□□ -1.9
TARDBP-208ENST00000477447 ZNF583Q96ND8 569 aa3.21□□□□□ -1.9
TARDBP-208ENST00000477447 POLR3CQ9BUI4 534 aaPredicted RBP3.21□□□□□ -1.9
TARDBP-208ENST00000477447 SEMA6AQ9H2E6 1030 aa3.21□□□□□ -1.9
TARDBP-208ENST00000477447 TCP11L1Q9NUJ3 509 aa3.21□□□□□ -1.9
TARDBP-208ENST00000477447 ARHGEF38Q9NXL2 777 aa3.21□□□□□ -1.9
TARDBP-208ENST00000477447 RCC2Q9P258 522 aaKnown RBP3.21□□□□□ -1.9
TARDBP-208ENST00000477447 DNAJB4Q9UDY4 337 aa3.21□□□□□ -1.9
TARDBP-208ENST00000477447 TSPYL4Q9UJ04 414 aa3.21□□□□□ -1.9
TARDBP-208ENST00000477447 RPS6KA6Q9UK32 745 aa3.21□□□□□ -1.9
TARDBP-208ENST00000477447 PLAGL1Q9UM63 463 aa3.21□□□□□ -1.9
TARDBP-208ENST00000477447 ZNF711Q9Y462 761 aa3.21□□□□□ -1.9
TARDBP-208ENST00000477447 SNX8Q9Y5X2 465 aa3.21□□□□□ -1.9
TARDBP-208ENST00000477447 EME2A4GXA9 379 aaPredicted RBP3.2□□□□□ -1.9
TARDBP-208ENST00000477447 PRSS44E7EML9 344 aa3.2□□□□□ -1.9
TARDBP-208ENST00000477447 CAPN9O14815 690 aa3.2□□□□□ -1.9
TARDBP-208ENST00000477447 BUD23O43709 281 aaKnown RBP3.2□□□□□ -1.9
TARDBP-208ENST00000477447 XPNPEP2O43895 674 aa3.2□□□□□ -1.9
TARDBP-208ENST00000477447 ENTPD3O75355 529 aa3.2□□□□□ -1.9
TARDBP-208ENST00000477447 BEST1O76090 585 aa3.2□□□□□ -1.9
TARDBP-208ENST00000477447 LDHCP07864 332 aa3.2□□□□□ -1.9
TARDBP-208ENST00000477447 F7P08709 466 aaPredicted RBP3.2□□□□□ -1.9
TARDBP-208ENST00000477447 KRT19P08727 400 aa3.2□□□□□ -1.9
TARDBP-208ENST00000477447 SELLP14151 372 aa3.2□□□□□ -1.9
TARDBP-208ENST00000477447 NMBRP28336 390 aa3.2□□□□□ -1.9
TARDBP-208ENST00000477447 AHRP35869 848 aa3.2□□□□□ -1.9
TARDBP-208ENST00000477447 PNLIPRP2P54317 469 aa3.2□□□□□ -1.9
TARDBP-208ENST00000477447 PITX1P78337 314 aaPredicted RBP3.2□□□□□ -1.9
TARDBP-208ENST00000477447 POU3F1Q03052 451 aaPredicted RBP3.2□□□□□ -1.9
TARDBP-208ENST00000477447 ILF3Q12906 894 aaKnown RBP eCLIP3.2□□□□□ -1.96e-6■□□□□ 8.6
TARDBP-208ENST00000477447 NTRK2Q16620 822 aa3.2□□□□□ -1.9
TARDBP-208ENST00000477447 FAM98BQ52LJ0 330 aaKnown RBP3.2□□□□□ -1.9
TARDBP-208ENST00000477447 KLHL22Q53GT1 634 aa3.2□□□□□ -1.9
TARDBP-208ENST00000477447 CLEC4GQ6UXB4 293 aa3.2□□□□□ -1.9
TARDBP-208ENST00000477447 FOXL2NBQ6ZUU3 175 aa3.2□□□□□ -1.9
TARDBP-208ENST00000477447 C9orf139Q6ZV77 190 aa3.2□□□□□ -1.9
TARDBP-208ENST00000477447 PLEKHM3Q6ZWE6 761 aa3.2□□□□□ -1.9
TARDBP-208ENST00000477447 ZNF534Q76KX8 674 aa3.2□□□□□ -1.9
TARDBP-208ENST00000477447 ENOSF1Q7L5Y1 443 aa3.2□□□□□ -1.9
TARDBP-208ENST00000477447 DSG4Q86SJ6 1040 aa3.2□□□□□ -1.9
TARDBP-208ENST00000477447 MCEMP1Q8IX19 187 aa3.2□□□□□ -1.9
TARDBP-208ENST00000477447 GBGT1Q8N5D6 347 aa3.2□□□□□ -1.9
TARDBP-208ENST00000477447 OR13A1Q8NGR1 328 aa3.2□□□□□ -1.9
TARDBP-208ENST00000477447 LRRC59Q96AG4 307 aaKnown RBP3.2□□□□□ -1.9
TARDBP-208ENST00000477447 DACH2Q96NX9 599 aa3.2□□□□□ -1.9
TARDBP-208ENST00000477447 KIFC3Q9BVG8 833 aa3.2□□□□□ -1.9
TARDBP-208ENST00000477447 TEX12Q9BXU0 123 aa3.2□□□□□ -1.9
TARDBP-208ENST00000477447 RTN4RQ9BZR6 473 aa3.2□□□□□ -1.9
TARDBP-208ENST00000477447 TRPC7Q9HCX4 862 aa3.2□□□□□ -1.9
TARDBP-208ENST00000477447 CHMP1AQ9HD42 196 aaPredicted RBP3.2□□□□□ -1.9
TARDBP-208ENST00000477447 PDE7BQ9NP56 450 aa3.2□□□□□ -1.9
TARDBP-208ENST00000477447 TRMT1Q9NXH9 659 aaKnown RBP3.2□□□□□ -1.9
TARDBP-208ENST00000477447 WSB2Q9NYS7 404 aaPredicted RBP3.2□□□□□ -1.9
TARDBP-208ENST00000477447 MRPL15Q9P015 296 aaKnown RBP3.2□□□□□ -1.9
TARDBP-208ENST00000477447 POLG2Q9UHN1 485 aa3.2□□□□□ -1.9
TARDBP-208ENST00000477447 KCNG2Q9UJ96 466 aa3.2□□□□□ -1.9
TARDBP-208ENST00000477447 ICAM5Q9UMF0 924 aa3.2□□□□□ -1.9
TARDBP-208ENST00000477447 IFITM10A6NMD0 228 aa3.19□□□□□ -1.9
TARDBP-208ENST00000477447 ANKRD66B4E2M5 251 aa3.19□□□□□ -1.9
TARDBP-208ENST00000477447 DVL1O14640 695 aa3.19□□□□□ -1.9
TARDBP-208ENST00000477447 NDUFS4O43181 175 aa3.19□□□□□ -1.9
TARDBP-208ENST00000477447 AVILO75366 819 aa3.19□□□□□ -1.9
TARDBP-208ENST00000477447 WISP2O76076 250 aa3.19□□□□□ -1.9
TARDBP-208ENST00000477447 BMP10O95393 424 aa3.19□□□□□ -1.9
TARDBP-208ENST00000477447 ATP1A1P05023 1023 aaKnown RBP3.19□□□□□ -1.9
TARDBP-208ENST00000477447 VPREB1P12018 145 aa3.19□□□□□ -1.9
TARDBP-208ENST00000477447 PRLRP16471 622 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms