RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 FCF1Q9Y324 198 aaKnown RBP18.42■□□□□ 0.54
VARS2-209ENST00000477288 SLC31A1O15431 190 aa18.42■□□□□ 0.54
VARS2-209ENST00000477288 OR1F1O43749 312 aa18.42■□□□□ 0.54
VARS2-209ENST00000477288 METTL18O95568 372 aa18.42■□□□□ 0.54
VARS2-209ENST00000477288 CAP1Q01518 475 aa18.42■□□□□ 0.54
VARS2-209ENST00000477288 VITQ6UXI7 678 aa18.42■□□□□ 0.54
VARS2-209ENST00000477288 CIR1Q86X95 450 aaPredicted RBP18.42■□□□□ 0.54
VARS2-209ENST00000477288 SLAIN1Q8ND83 568 aa18.42■□□□□ 0.54
VARS2-209ENST00000477288 MARCH7Q9H992 704 aa18.42■□□□□ 0.54
VARS2-209ENST00000477288 EPHB6O15197 1021 aa18.42■□□□□ 0.54
VARS2-209ENST00000477288 ETS2P15036 469 aa18.42■□□□□ 0.54
VARS2-209ENST00000477288 GALK1P51570 392 aa18.42■□□□□ 0.54
VARS2-209ENST00000477288 PIK3C3Q8NEB9 887 aa18.42■□□□□ 0.54
VARS2-209ENST00000477288 PPM1MQ96MI6 270 aa18.42■□□□□ 0.54
VARS2-209ENST00000477288 RAPGEFL1Q9UHV5 662 aa18.42■□□□□ 0.54
VARS2-209ENST00000477288 PER2O15055 1255 aa18.41■□□□□ 0.54
VARS2-209ENST00000477288 SEPT4O43236 478 aa18.41■□□□□ 0.54
VARS2-209ENST00000477288 IL12BP29460 328 aa18.41■□□□□ 0.54
VARS2-209ENST00000477288 ADRA1BP35368 520 aa18.41■□□□□ 0.54
VARS2-209ENST00000477288 SPATA19Q7Z5L4 167 aa18.41■□□□□ 0.54
VARS2-209ENST00000477288 FBXO15Q8NCQ5 510 aaPredicted RBP18.41■□□□□ 0.54
VARS2-209ENST00000477288 MCFD2Q8NI22 146 aa18.41■□□□□ 0.54
VARS2-209ENST00000477288 HPS1Q92902 700 aa18.41■□□□□ 0.54
VARS2-209ENST00000477288 NKD1Q969G9 470 aa18.41■□□□□ 0.54
VARS2-209ENST00000477288 COPS4Q9BT78 406 aa18.41■□□□□ 0.54
VARS2-209ENST00000477288 VBP1P61758 197 aa18.41■□□□□ 0.54
VARS2-209ENST00000477288 DSC2Q02487 901 aa18.41■□□□□ 0.54
VARS2-209ENST00000477288 GRSF1Q12849 480 aaKnown RBP eCLIP18.41■□□□□ 0.545e-13■■□□□ 11.5
VARS2-209ENST00000477288 HTRA1Q92743 480 aa18.41■□□□□ 0.54
VARS2-209ENST00000477288 C5orf60A6NFR6 353 aa18.41■□□□□ 0.54
VARS2-209ENST00000477288 CHST10O43529 356 aa18.41■□□□□ 0.54
VARS2-209ENST00000477288 MFSD11O43934 449 aa18.41■□□□□ 0.54
VARS2-209ENST00000477288 DHFRP00374 187 aa18.41■□□□□ 0.54
VARS2-209ENST00000477288 ALPPL2P10696 532 aa18.41■□□□□ 0.54
VARS2-209ENST00000477288 GNPDA1P46926 289 aa18.41■□□□□ 0.54
VARS2-209ENST00000477288 DLG1Q12959 904 aa18.41■□□□□ 0.54
VARS2-209ENST00000477288 SIM2Q14190 667 aaPredicted RBP18.41■□□□□ 0.54
VARS2-209ENST00000477288 TEX44Q53QW1 395 aa18.41■□□□□ 0.54
VARS2-209ENST00000477288 SH3RF1Q7Z6J0 888 aa18.41■□□□□ 0.54
VARS2-209ENST00000477288 HID1Q8IV36 788 aa18.41■□□□□ 0.54
VARS2-209ENST00000477288 FAM83DQ9H4H8 585 aa18.41■□□□□ 0.54
VARS2-209ENST00000477288 KMOO15229 486 aa18.41■□□□□ 0.54
VARS2-209ENST00000477288 DHX15O43143 795 aaKnown RBP18.41■□□□□ 0.54
VARS2-209ENST00000477288 SPATA31C1P0DKV0 1188 aa18.41■□□□□ 0.54
VARS2-209ENST00000477288 POLR2JP52435 117 aaKnown RBP18.41■□□□□ 0.54
VARS2-209ENST00000477288 ARL14EPQ8N8R7 260 aaPredicted RBP18.41■□□□□ 0.54
VARS2-209ENST00000477288 SMPDL3BQ92485 455 aa18.41■□□□□ 0.54
VARS2-209ENST00000477288 CSPG4P5Q96PW8 444 aa18.41■□□□□ 0.54
VARS2-209ENST00000477288 RHOJQ9H4E5 214 aa18.41■□□□□ 0.54
VARS2-209ENST00000477288 WDR55Q9H6Y2 383 aaPredicted RBP18.41■□□□□ 0.54
VARS2-209ENST00000477288 HCN3Q9P1Z3 774 aa18.41■□□□□ 0.54
VARS2-209ENST00000477288 GNEQ9Y223 722 aaKnown RBP18.41■□□□□ 0.54
VARS2-209ENST00000477288 A0A0U1RQJ8 604 aa18.41■□□□□ 0.54
VARS2-209ENST00000477288 RIIAD1A6NNX1 92 aa18.41■□□□□ 0.54
VARS2-209ENST00000477288 RTP1P59025 263 aa18.41■□□□□ 0.54
VARS2-209ENST00000477288 LDB1Q86U70 411 aaPredicted RBP18.41■□□□□ 0.54
VARS2-209ENST00000477288 OR2L3Q8NG85 312 aa18.41■□□□□ 0.54
VARS2-209ENST00000477288 GPR21Q99679 349 aa18.41■□□□□ 0.54
VARS2-209ENST00000477288 CST11Q9H112 138 aa18.41■□□□□ 0.54
VARS2-209ENST00000477288 ACSS3Q9H6R3 686 aa18.41■□□□□ 0.54
VARS2-209ENST00000477288 TIMM22Q9Y584 194 aa18.41■□□□□ 0.54
VARS2-209ENST00000477288 RPL5P46777 297 aaKnown RBP18.4■□□□□ 0.54
VARS2-209ENST00000477288 RFTN2Q52LD8 501 aaPredicted RBP18.4■□□□□ 0.54
VARS2-209ENST00000477288 PPP2R2DQ66LE6 453 aa18.4■□□□□ 0.54
VARS2-209ENST00000477288 NPAS4Q8IUM7 802 aa18.4■□□□□ 0.54
VARS2-209ENST00000477288 SPATA9Q9BWV2 254 aa18.4■□□□□ 0.54
VARS2-209ENST00000477288 CCDC177Q9NQR7 707 aaPredicted RBP18.4■□□□□ 0.54
VARS2-209ENST00000477288 PRAMEF1O95521 474 aa18.4■□□□□ 0.54
VARS2-209ENST00000477288 UROSP10746 265 aa18.4■□□□□ 0.54
VARS2-209ENST00000477288 RGS8P57771 180 aaPredicted RBP18.4■□□□□ 0.54
VARS2-209ENST00000477288 DUPD1Q68J44 220 aa18.4■□□□□ 0.54
VARS2-209ENST00000477288 ABHD15Q6UXT9 468 aa18.4■□□□□ 0.54
VARS2-209ENST00000477288 XYLT1Q86Y38 959 aa18.4■□□□□ 0.54
VARS2-209ENST00000477288 SRFBP1Q8NEF9 429 aaKnown RBP18.4■□□□□ 0.54
VARS2-209ENST00000477288 LENG1Q96BZ8 264 aaPredicted RBP18.4■□□□□ 0.54
VARS2-209ENST00000477288 GAL3ST1Q99999 423 aa18.4■□□□□ 0.54
VARS2-209ENST00000477288 POLMQ9NP87 494 aaPredicted RBP18.4■□□□□ 0.54
VARS2-209ENST00000477288 SLC17A7Q9P2U7 560 aa18.4■□□□□ 0.54
VARS2-209ENST00000477288 ERVK-11Q9UQG0 969 aa18.4■□□□□ 0.54
VARS2-209ENST00000477288 ENPP3O14638 875 aa18.4■□□□□ 0.54
VARS2-209ENST00000477288 IL17AQ16552 155 aa18.4■□□□□ 0.54
VARS2-209ENST00000477288 BICRALQ6AI39 1079 aa18.4■□□□□ 0.54
VARS2-209ENST00000477288 GLYATQ6IB77 296 aa18.4■□□□□ 0.54
VARS2-209ENST00000477288 ZCCHC12Q6PEW1 402 aa18.4■□□□□ 0.54
VARS2-209ENST00000477288 ZNF613Q6PF04 617 aa18.4■□□□□ 0.54
VARS2-209ENST00000477288 COPS7AQ9UBW8 275 aa18.4■□□□□ 0.54
VARS2-209ENST00000477288 DGKBQ9Y6T7 804 aa18.4■□□□□ 0.54
VARS2-209ENST00000477288 NDST3O95803 873 aa18.4■□□□□ 0.54
VARS2-209ENST00000477288 SLC35G6P0C7Q6 338 aa18.4■□□□□ 0.54
VARS2-209ENST00000477288 RHOQP17081 205 aa18.4■□□□□ 0.54
VARS2-209ENST00000477288 IGFBP5P24593 272 aa18.4■□□□□ 0.54
VARS2-209ENST00000477288 CTSOP43234 321 aaPredicted RBP18.4■□□□□ 0.54
VARS2-209ENST00000477288 FBXO48Q5FWF7 155 aa18.4■□□□□ 0.54
VARS2-209ENST00000477288 UBXN11Q5T124 520 aa18.4■□□□□ 0.54
VARS2-209ENST00000477288 KLK6Q92876 244 aa18.4■□□□□ 0.54
VARS2-209ENST00000477288 LHX5Q9H2C1 402 aa18.4■□□□□ 0.54
VARS2-209ENST00000477288 SLCO1B3Q9NPD5 702 aa18.4■□□□□ 0.54
VARS2-209ENST00000477288 FABP3P05413 133 aa18.4■□□□□ 0.54
VARS2-209ENST00000477288 SLC20A2Q08357 652 aa18.4■□□□□ 0.54
VARS2-209ENST00000477288 AKAP14Q86UN6 197 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms