RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 NIPSNAP2O75323 286 aa16.27■□□□□ 0.2
TMEM53-208ENST00000476724 RPL5P46777 297 aaKnown RBP16.27■□□□□ 0.2
TMEM53-208ENST00000476724 POLE2P56282 527 aa16.27■□□□□ 0.2
TMEM53-208ENST00000476724 KCNK10P57789 538 aa16.27■□□□□ 0.2
TMEM53-208ENST00000476724 ROR2Q01974 943 aaKnown RBP16.27■□□□□ 0.2
TMEM53-208ENST00000476724 XKR7Q5GH72 579 aa16.27■□□□□ 0.2
TMEM53-208ENST00000476724 SYVN1Q86TM6 617 aa16.27■□□□□ 0.2
TMEM53-208ENST00000476724 ITIH5Q86UX2 942 aa16.27■□□□□ 0.2
TMEM53-208ENST00000476724 TMC8Q8IU68 726 aa16.27■□□□□ 0.2
TMEM53-208ENST00000476724 SLC15A3Q8IY34 581 aa16.27■□□□□ 0.2
TMEM53-208ENST00000476724 CHCHD4Q8N4Q1 142 aa16.27■□□□□ 0.2
TMEM53-208ENST00000476724 KREMEN2Q8NCW0 462 aa16.27■□□□□ 0.2
TMEM53-208ENST00000476724 ADAMTS19Q8TE59 1207 aa16.27■□□□□ 0.2
TMEM53-208ENST00000476724 SLC22A17Q8WUG5 538 aa16.27■□□□□ 0.2
TMEM53-208ENST00000476724 EEF1AKMT1Q8WVE0 214 aa16.27■□□□□ 0.2
TMEM53-208ENST00000476724 LRTOMTQ8WZ04 291 aa16.27■□□□□ 0.2
TMEM53-208ENST00000476724 NCSTNQ92542 709 aa16.27■□□□□ 0.2
TMEM53-208ENST00000476724 LRRC58Q96CX6 371 aa16.27■□□□□ 0.2
TMEM53-208ENST00000476724 SLC30A3Q99726 388 aa16.27■□□□□ 0.2
TMEM53-208ENST00000476724 LRRC3Q9BY71 257 aa16.27■□□□□ 0.2
TMEM53-208ENST00000476724 TRIM54Q9BYV2 358 aa16.27■□□□□ 0.2
TMEM53-208ENST00000476724 CCM2LQ9NUG4 571 aaPredicted RBP16.27■□□□□ 0.2
TMEM53-208ENST00000476724 AIG1Q9NVV5 245 aa16.27■□□□□ 0.2
TMEM53-208ENST00000476724 NUDT4Q9NZJ9 180 aa16.27■□□□□ 0.2
TMEM53-208ENST00000476724 CD274Q9NZQ7 290 aa16.27■□□□□ 0.2
TMEM53-208ENST00000476724 IL17CQ9P0M4 197 aa16.27■□□□□ 0.2
TMEM53-208ENST00000476724 LHX3Q9UBR4 397 aa16.27■□□□□ 0.2
TMEM53-208ENST00000476724 MAFFQ9ULX9 164 aa16.27■□□□□ 0.2
TMEM53-208ENST00000476724 BTRCQ9Y297 605 aa16.27■□□□□ 0.2
TMEM53-208ENST00000476724 SLC30A1Q9Y6M5 507 aa16.27■□□□□ 0.2
TMEM53-208ENST00000476724 CHD7Q9P2D1 2997 aa16.27■□□□□ 0.19
TMEM53-208ENST00000476724 GRXCR1A8MXD5 290 aa16.26■□□□□ 0.19
TMEM53-208ENST00000476724 NME4O00746 187 aa16.26■□□□□ 0.19
TMEM53-208ENST00000476724 OR1I1O60431 355 aa16.26■□□□□ 0.19
TMEM53-208ENST00000476724 LRG1P02750 347 aa16.26■□□□□ 0.19
TMEM53-208ENST00000476724 ADH1AP07327 375 aa16.26■□□□□ 0.19
TMEM53-208ENST00000476724 GJA1P17302 382 aa16.26■□□□□ 0.19
TMEM53-208ENST00000476724 HMGCLP35914 325 aa16.26■□□□□ 0.19
TMEM53-208ENST00000476724 CREB5Q02930 508 aa16.26■□□□□ 0.19
TMEM53-208ENST00000476724 CNPY1Q3B7I2 92 aa16.26■□□□□ 0.19
TMEM53-208ENST00000476724 CYP2R1Q6VVX0 501 aa16.26■□□□□ 0.19
TMEM53-208ENST00000476724 TAS2R42Q7RTR8 314 aa16.26■□□□□ 0.19
TMEM53-208ENST00000476724 SPDYE1Q8NFV5 336 aaPredicted RBP16.26■□□□□ 0.19
TMEM53-208ENST00000476724 PHOSPHO2Q8TCD6 241 aa16.26■□□□□ 0.19
TMEM53-208ENST00000476724 SPPL3Q8TCT6 385 aa16.26■□□□□ 0.19
TMEM53-208ENST00000476724 CNBD2Q96M20 576 aa16.26■□□□□ 0.19
TMEM53-208ENST00000476724 ZNF382Q96SR6 550 aa16.26■□□□□ 0.19
TMEM53-208ENST00000476724 MRPS26Q9BYN8 205 aaKnown RBP16.26■□□□□ 0.19
TMEM53-208ENST00000476724 BRINP2Q9C0B6 783 aa16.26■□□□□ 0.19
TMEM53-208ENST00000476724 P2RY12Q9H244 342 aa16.26■□□□□ 0.19
TMEM53-208ENST00000476724 COQ10BQ9H8M1 238 aa16.26■□□□□ 0.19
TMEM53-208ENST00000476724 BPIFA1Q9NP55 256 aa16.26■□□□□ 0.19
TMEM53-208ENST00000476724 SLC52A3Q9NQ40 469 aa16.26■□□□□ 0.19
TMEM53-208ENST00000476724 GIMAP2Q9UG22 337 aa16.26■□□□□ 0.19
TMEM53-208ENST00000476724 PADI4Q9UM07 663 aa16.26■□□□□ 0.19
TMEM53-208ENST00000476724 LZTS1Q9Y250 596 aa16.26■□□□□ 0.19
TMEM53-208ENST00000476724 DHRS7Q9Y394 339 aa16.26■□□□□ 0.19
TMEM53-208ENST00000476724 TIMM22Q9Y584 194 aa16.26■□□□□ 0.19
TMEM53-208ENST00000476724 TNPO3Q9Y5L0 923 aaKnown RBP16.26■□□□□ 0.19
TMEM53-208ENST00000476724 SNX13Q9Y5W8 968 aa16.26■□□□□ 0.19
TMEM53-208ENST00000476724 HNRNPRO43390 633 aaKnown RBP16.26■□□□□ 0.19
TMEM53-208ENST00000476724 CLPTM1O96005 669 aa16.26■□□□□ 0.19
TMEM53-208ENST00000476724 SMIM18P0DKX4 95 aa16.26■□□□□ 0.19
TMEM53-208ENST00000476724 BMP2P12643 396 aa16.26■□□□□ 0.19
TMEM53-208ENST00000476724 IRS1P35568 1242 aa16.26■□□□□ 0.19
TMEM53-208ENST00000476724 NME5P56597 212 aa16.26■□□□□ 0.19
TMEM53-208ENST00000476724 RHOAP61586 193 aa16.26■□□□□ 0.19
TMEM53-208ENST00000476724 AP1S1P61966 158 aa16.26■□□□□ 0.19
TMEM53-208ENST00000476724 ERVK-8P63133 956 aa16.26■□□□□ 0.19
TMEM53-208ENST00000476724 INPP5AQ14642 412 aa16.26■□□□□ 0.19
TMEM53-208ENST00000476724 RBBP7Q16576 425 aa16.26■□□□□ 0.19
TMEM53-208ENST00000476724 PDCD4Q53EL6 469 aaKnown RBP16.26■□□□□ 0.19
TMEM53-208ENST00000476724 GPRIN3Q6ZVF9 776 aa16.26■□□□□ 0.19
TMEM53-208ENST00000476724 ANKFN1Q8N957 763 aa16.26■□□□□ 0.19
TMEM53-208ENST00000476724 HJURPQ8NCD3 748 aaPredicted RBP16.26■□□□□ 0.19
TMEM53-208ENST00000476724 SMIM14Q96QK8 99 aa16.26■□□□□ 0.19
TMEM53-208ENST00000476724 SLC39A3Q9BRY0 314 aa16.26■□□□□ 0.19
TMEM53-208ENST00000476724 FEM1AQ9BSK4 669 aa16.26■□□□□ 0.19
TMEM53-208ENST00000476724 SLC2A11Q9BYW1 496 aa16.26■□□□□ 0.19
TMEM53-208ENST00000476724 ACTR3BQ9P1U1 418 aa16.26■□□□□ 0.19
TMEM53-208ENST00000476724 IRAK3Q9Y616 596 aa16.26■□□□□ 0.19
TMEM53-208ENST00000476724 A0A1B0GTL3 188 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 DYTNA2CJ06 578 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 NCF1BA6NI72 391 aaPredicted RBP16.25■□□□□ 0.19
TMEM53-208ENST00000476724 NCF1CA8MVU1 366 aaPredicted RBP16.25■□□□□ 0.19
TMEM53-208ENST00000476724 FXYD1O00168 92 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 E2F3O00716 465 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 PRMT5O14744 637 aaPredicted RBP16.25■□□□□ 0.19
TMEM53-208ENST00000476724 SNAP91O60641 907 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 TBL1XO60907 577 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 OLFM2O95897 454 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 NPPAP01160 153 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 NCF1P14598 390 aaPredicted RBP16.25■□□□□ 0.19
TMEM53-208ENST00000476724 PSMC3P17980 439 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 SLC6A2P23975 617 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 GSTT1P30711 240 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 GRIA2P42262 883 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 GRIA3P42263 894 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 AGTR2P50052 363 aa16.25■□□□□ 0.19
TMEM53-208ENST00000476724 TXNL4AP83876 142 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms