RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 PNPLA4P41247 253 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 RAB25P57735 213 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 YBX1P67809 324 aaKnown RBP4.94□□□□□ -1.62
CCDC39-204ENST00000476379 CYP4F8P98187 520 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 MYBPC1Q00872 1141 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 BTG3Q14201 252 aaPredicted RBP4.94□□□□□ -1.62
CCDC39-204ENST00000476379 RUNDC3AQ59EK9 446 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 RNF219Q5W0B1 726 aaPredicted RBP4.94□□□□□ -1.62
CCDC39-204ENST00000476379 UGT3A1Q6NUS8 523 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 GPR153Q6NV75 609 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 FBXO46Q6PJ61 603 aaPredicted RBP4.94□□□□□ -1.62
CCDC39-204ENST00000476379 EPGNQ6UW88 154 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 ZYG11AQ6WRX3 759 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 MEX3DQ86XN8 651 aaKnown RBP4.94□□□□□ -1.62
CCDC39-204ENST00000476379 ZCCHC7Q8N3Z6 543 aaKnown RBP4.94□□□□□ -1.62
CCDC39-204ENST00000476379 ENDOVQ8N8Q3 282 aaKnown RBP4.94□□□□□ -1.62
CCDC39-204ENST00000476379 NIPA2Q8N8Q9 360 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 PCSK9Q8NBP7 692 aaKnown RBP4.94□□□□□ -1.62
CCDC39-204ENST00000476379 OR5AK3PQ8NH89 298 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 CNIH3Q8TBE1 160 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 MZB1Q8WU39 189 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 EEF1AKMT1Q8WVE0 214 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.94□□□□□ -1.62
CCDC39-204ENST00000476379 ART5Q96L15 291 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 MRPL57Q9BQC6 102 aaKnown RBP4.94□□□□□ -1.62
CCDC39-204ENST00000476379 CHID1Q9BWS9 393 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 BEX2Q9BXY8 128 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 FRMD8Q9BZ67 464 aaPredicted RBP4.94□□□□□ -1.62
CCDC39-204ENST00000476379 EPB41L1Q9H4G0 881 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 RHCGQ9UBD6 479 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 VPS51Q9UID3 782 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 DICER1Q9UPY3 1922 aaKnown RBP4.94□□□□□ -1.62
CCDC39-204ENST00000476379 CFAP20Q9Y6A4 193 aaKnown RBP4.94□□□□□ -1.62
CCDC39-204ENST00000476379 KNTC1P50748 2209 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 NRCAMQ92823 1304 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 TRBV23OR9-2A0A075B6M9 112 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 ZCWPW2A0A1B0GU75 182 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 KRBA1A5PL33 1030 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 E7ESA3 106 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 G3V2L1 256 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 SDHDO14521 159 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 GAS2O43903 313 aaKnown RBP4.94□□□□□ -1.62
CCDC39-204ENST00000476379 FAM20BO75063 409 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 MYL4P12829 197 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 TPSB2P20231 275 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 SDHBP21912 280 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 RPS3AP61247 264 aaKnown RBP4.94□□□□□ -1.62
CCDC39-204ENST00000476379 CLCQ05315 142 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 CDK18Q07002 472 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 DBPQ10586 325 aaPredicted RBP4.94□□□□□ -1.62
CCDC39-204ENST00000476379 TPSAB1Q15661 275 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 TBCCQ15814 346 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 TNFAIP8L3Q5GJ75 292 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 PLPP4Q5VZY2 271 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 FBXL22Q6P050 247 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 TRIM74Q86UV6 250 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 TRIM73Q86UV7 250 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 HIPK1Q86Z02 1210 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 PGAM4Q8N0Y7 254 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 OR4L1Q8NH43 312 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 CALML6Q8TD86 181 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 SELENOMQ8WWX9 145 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 FOXJ1Q92949 421 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 C12orf43Q96C57 262 aaKnown RBP4.94□□□□□ -1.62
CCDC39-204ENST00000476379 MUS81Q96NY9 551 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 OSGEPL1Q9H4B0 414 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 MTG2Q9H4K7 406 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 NSUN3Q9H649 340 aaKnown RBP4.94□□□□□ -1.62
CCDC39-204ENST00000476379 ZDHHC6Q9H6R6 413 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 PALMDQ9NP74 551 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 FARSBQ9NSD9 589 aaKnown RBP4.94□□□□□ -1.62
CCDC39-204ENST00000476379 CACNA2D2Q9NY47 1150 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 ADGRE2Q9UHX3 823 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 PAIP2BQ9ULR5 123 aaKnown RBP4.94□□□□□ -1.62
CCDC39-204ENST00000476379 TCAF1Q9Y4C2 921 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 NBASA2RRP1 2371 aa4.94□□□□□ -1.62
CCDC39-204ENST00000476379 CAPN14A8MX76 684 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 MITFO75030 526 aaPredicted RBP4.93□□□□□ -1.62
CCDC39-204ENST00000476379 DAB1O75553 588 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 CLPXO76031 633 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 NADKO95544 446 aaPredicted RBP4.93□□□□□ -1.62
CCDC39-204ENST00000476379 LHX1P48742 406 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 POLD2P49005 469 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 NR1H2P55055 460 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 SH3BP2P78314 561 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 PRKCQQ04759 706 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 GANABQ14697 944 aaKnown RBP4.93□□□□□ -1.62
CCDC39-204ENST00000476379 TRIP4Q15650 581 aaPredicted RBP4.93□□□□□ -1.62
CCDC39-204ENST00000476379 MAPKAPK3Q16644 382 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 PAGE2Q7Z2X7 111 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 METTL25Q8N6Q8 603 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 BEND7Q8N7W2 519 aaPredicted RBP4.93□□□□□ -1.62
CCDC39-204ENST00000476379 ZNF540Q8NDQ6 660 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 IGSF8Q969P0 613 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 PHOX2BQ99453 314 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 DPH2Q9BQC3 489 aaPredicted RBP4.93□□□□□ -1.62
CCDC39-204ENST00000476379 TDRD1Q9BXT4 1180 aaKnown RBP4.93□□□□□ -1.62
CCDC39-204ENST00000476379 DNAAF2Q9NVR5 837 aaKnown RBP4.93□□□□□ -1.62
CCDC39-204ENST00000476379 TOR4AQ9NXH8 423 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 EURLQ9NYK6 297 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms