RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 NT5C1B-RDH14C9J2C7 533 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 E9PQ18 207 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 ARNTLO00327 626 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 CFLARO15519 480 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 VPS4BO75351 444 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 MT-CYBP00156 380 aaPredicted RBP6.81□□□□□ -1.32
UBR4-212ENST00000475973 ALDH2P05091 517 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 URODP06132 367 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 RPS17P08708 135 aaKnown RBP6.81□□□□□ -1.32
UBR4-212ENST00000475973 USP17L7P0C7H9 530 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 NCAM1P13591 858 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 GFAPP14136 432 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 IDO1P14902 403 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 TIMP2P16035 220 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 CKMT2P17540 419 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 HDCP19113 662 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 OGNP20774 298 aaKnown RBP6.81□□□□□ -1.32
UBR4-212ENST00000475973 MTHFRP42898 656 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 GLRBP48167 497 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 HLCSP50747 726 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 SLC7A2P52569 658 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 ADARP55265 1226 aaKnown RBP6.81□□□□□ -1.32
UBR4-212ENST00000475973 WNT3AP56704 352 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 NME3Q13232 169 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 SPIDRQ14159 915 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 RCAN2Q14206 197 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 ZNF460Q14592 562 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 UPP1Q16831 310 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 AGKQ53H12 422 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 ZNF280DQ6N043 979 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 ZNF549Q6P9A3 640 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 KLHL35Q6PF15 583 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 ZBTB49Q6ZSB9 765 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 SPATA19Q7Z5L4 167 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 SCD5Q86SK9 330 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 PATL1Q86TB9 770 aaKnown RBP6.81□□□□□ -1.32
UBR4-212ENST00000475973 DCP1BQ8IZD4 617 aaKnown RBP6.81□□□□□ -1.32
UBR4-212ENST00000475973 AFAP1L2Q8N4X5 818 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 RNF148Q8N7C7 305 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 MRPL43Q8N983 215 aaKnown RBP6.81□□□□□ -1.32
UBR4-212ENST00000475973 PCYOX1LQ8NBM8 494 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 FAM156AQ8NDB6 213 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 C3orf58Q8NDZ4 430 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 TNIP2Q8NFZ5 429 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 VN1R2Q8NFZ6 395 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 TBC1D15Q8TC07 691 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 FBLIM1Q8WUP2 373 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 SUSD6Q92537 303 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 TMEM125Q96AQ2 219 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 PTERQ96BW5 349 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 C19orf60Q96EN9 201 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 RMND5BQ96G75 393 aaPredicted RBP6.81□□□□□ -1.32
UBR4-212ENST00000475973 ATXN7L3BQ96GX2 97 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 DNAJC1Q96KC8 554 aaKnown RBP6.81□□□□□ -1.32
UBR4-212ENST00000475973 BTN2A3PQ96KV6 586 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 RDH12Q96NR8 316 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 PLEKHG4BQ96PX9 1271 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 CCT7Q99832 543 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 APOL2Q9BQE5 337 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 C9orf16Q9BUW7 83 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 ADI1Q9BV57 179 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 FICDQ9BVA6 458 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 NUSAP1Q9BXS6 441 aaKnown RBP6.81□□□□□ -1.32
UBR4-212ENST00000475973 RBCK1Q9BYM8 510 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 TRIM54Q9BYV2 358 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 KCNH6Q9H252 994 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 RETREG1Q9H6L5 497 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 CATSPERBQ9H7T0 1116 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 AKTIPQ9H8T0 292 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 ZFAND3Q9H8U3 227 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 SFXN1Q9H9B4 322 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 ABCC13Q9NSE7 274 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 NDFIP2Q9NV92 336 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 DDX18Q9NVP1 670 aaKnown RBP6.81□□□□□ -1.32
UBR4-212ENST00000475973 MIOSQ9NXC5 875 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 TOR4AQ9NXH8 423 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 DPP7Q9UHL4 492 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 APPL1Q9UKG1 709 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 B3GNT3Q9Y2A9 372 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 GIT1Q9Y2X7 761 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 SLC30A1Q9Y6M5 507 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 REV3LO60673 3130 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 MYLKQ15746 1914 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 NLRC5Q86WI3 1866 aa6.81□□□□□ -1.32
UBR4-212ENST00000475973 DHRS12A0PJE2 317 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 CCDC78A2IDD5 438 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 GOLGA8TH3BQL2 631 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 STX16O14662 325 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 ANKRD28O15084 1053 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 SNAP91O60641 907 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 EEDO75530 441 aaKnown RBP6.8□□□□□ -1.32
UBR4-212ENST00000475973 DNAJB5O75953 348 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 SEC14L2O76054 403 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 SRP72O76094 671 aaKnown RBP6.8□□□□□ -1.32
UBR4-212ENST00000475973 SUPT7LO94864 414 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 CXCL14O95715 111 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 POMCP01189 267 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 GALTP07902 379 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 FCGR1AP12314 374 aa6.8□□□□□ -1.32
UBR4-212ENST00000475973 HNRNPLP14866 589 aaKnown RBP eCLIP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms