RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 KDM4CQ9H3R0 1056 aa12.1□□□□□ -0.47
MRPL55-227ENST00000475832 MANSC1Q9H8J5 431 aa12.1□□□□□ -0.47
MRPL55-227ENST00000475832 PREBQ9HCU5 417 aa12.1□□□□□ -0.47
MRPL55-227ENST00000475832 SARS2Q9NP81 518 aaKnown RBP12.1□□□□□ -0.47
MRPL55-227ENST00000475832 SPATS2LQ9NUQ6 558 aaKnown RBP12.1□□□□□ -0.47
MRPL55-227ENST00000475832 TMEM216Q9P0N5 145 aa12.1□□□□□ -0.47
MRPL55-227ENST00000475832 KLHL42Q9P2K6 505 aa12.1□□□□□ -0.47
MRPL55-227ENST00000475832 OAS3Q9Y6K5 1087 aaKnown RBP12.1□□□□□ -0.47
MRPL55-227ENST00000475832 CEP250Q9BV73 2442 aa12.1□□□□□ -0.47
MRPL55-227ENST00000475832 DMXL1Q9Y485 3027 aa12.1□□□□□ -0.47
MRPL55-227ENST00000475832 MAP1BP46821 2468 aaKnown RBP12.1□□□□□ -0.47
MRPL55-227ENST00000475832 SPTBN2O15020 2390 aa12.1□□□□□ -0.47
MRPL55-227ENST00000475832 A0A1W2PQF6 199 aa12.09□□□□□ -0.47
MRPL55-227ENST00000475832 TCRBV21S2A2A0A5A6 115 aa12.09□□□□□ -0.47
MRPL55-227ENST00000475832 FAM170BA6NMN3 283 aa12.09□□□□□ -0.47
MRPL55-227ENST00000475832 STK25O00506 426 aa12.09□□□□□ -0.47
MRPL55-227ENST00000475832 NDUFAB1O14561 156 aa12.09□□□□□ -0.47
MRPL55-227ENST00000475832 KLF11O14901 512 aa12.09□□□□□ -0.47
MRPL55-227ENST00000475832 SMIM24O75264 130 aa12.09□□□□□ -0.47
MRPL55-227ENST00000475832 NIPSNAP2O75323 286 aa12.09□□□□□ -0.47
MRPL55-227ENST00000475832 SLC25A14O95258 325 aaPredicted RBP12.09□□□□□ -0.47
MRPL55-227ENST00000475832 TRIM16O95361 564 aa12.09□□□□□ -0.47
MRPL55-227ENST00000475832 FAM107AO95990 144 aa12.09□□□□□ -0.47
MRPL55-227ENST00000475832 ATP1B2P14415 290 aaPredicted RBP12.09□□□□□ -0.47
MRPL55-227ENST00000475832 ZNF37AP17032 561 aaPredicted RBP12.09□□□□□ -0.47
MRPL55-227ENST00000475832 CD72P21854 359 aa12.09□□□□□ -0.47
MRPL55-227ENST00000475832 DGKAP23743 735 aa12.09□□□□□ -0.47
MRPL55-227ENST00000475832 GRK2P25098 689 aa12.09□□□□□ -0.47
MRPL55-227ENST00000475832 TARSP26639 723 aaKnown RBP12.09□□□□□ -0.47
MRPL55-227ENST00000475832 RPS9P46781 194 aaKnown RBP12.09□□□□□ -0.47
MRPL55-227ENST00000475832 UBXN2BQ14CS0 331 aa12.09□□□□□ -0.47
MRPL55-227ENST00000475832 CTSL3PQ5NE16 218 aa12.09□□□□□ -0.47
MRPL55-227ENST00000475832 RFLNAQ6ZTI6 216 aa12.09□□□□□ -0.47
MRPL55-227ENST00000475832 OTOAQ7RTW8 1153 aa12.09□□□□□ -0.47
MRPL55-227ENST00000475832 RAB44Q7Z6P3 723 aaPredicted RBP12.09□□□□□ -0.47
MRPL55-227ENST00000475832 PGBD3Q8N328 593 aa12.09□□□□□ -0.47
MRPL55-227ENST00000475832 DDHD1Q8NEL9 900 aa12.09□□□□□ -0.47
MRPL55-227ENST00000475832 BCAS4Q8TDM0 211 aa12.09□□□□□ -0.47
MRPL55-227ENST00000475832 ZNF75CPQ92670 426 aaPredicted RBP12.09□□□□□ -0.47
MRPL55-227ENST00000475832 NXNL1Q96CM4 212 aa12.09□□□□□ -0.47
MRPL55-227ENST00000475832 UBXN10Q96LJ8 280 aa12.09□□□□□ -0.47
MRPL55-227ENST00000475832 PITPNM3Q9BZ71 974 aa12.09□□□□□ -0.47
MRPL55-227ENST00000475832 MKRN2Q9H000 416 aaKnown RBP12.09□□□□□ -0.47
MRPL55-227ENST00000475832 LMAN1LQ9HAT1 526 aa12.09□□□□□ -0.47
MRPL55-227ENST00000475832 COPG2Q9UBF2 871 aa12.09□□□□□ -0.47
MRPL55-227ENST00000475832 TMCO1Q9UM00 188 aa12.09□□□□□ -0.47
MRPL55-227ENST00000475832 DHRS7Q9Y394 339 aa12.09□□□□□ -0.47
MRPL55-227ENST00000475832 MYLKQ15746 1914 aa12.09□□□□□ -0.47
MRPL55-227ENST00000475832 ANKRD36A6QL64 1941 aa12.08□□□□□ -0.48
MRPL55-227ENST00000475832 IGLV3-16A0A075B6K0 115 aa12.08□□□□□ -0.48
MRPL55-227ENST00000475832 TBC1D3DA0A087WVF3 549 aa12.08□□□□□ -0.48
MRPL55-227ENST00000475832 TBC1D3IA0A087WXS9 549 aa12.08□□□□□ -0.48
MRPL55-227ENST00000475832 TBC1D3EA0A087X179 549 aa12.08□□□□□ -0.48
MRPL55-227ENST00000475832 TBC1D3KA0A087X1G2 549 aa12.08□□□□□ -0.48
MRPL55-227ENST00000475832 PABPN1LA6NDY0 278 aaKnown RBP12.08□□□□□ -0.48
MRPL55-227ENST00000475832 TBC1D3FA6NER0 549 aaPredicted RBP12.08□□□□□ -0.48
MRPL55-227ENST00000475832 ANTXRLA6NF34 631 aa12.08□□□□□ -0.48
MRPL55-227ENST00000475832 LRRC72A6NJI9 287 aa12.08□□□□□ -0.48
MRPL55-227ENST00000475832 SYCE1LA8MT33 242 aa12.08□□□□□ -0.48
MRPL55-227ENST00000475832 CHURC1-FNTBB4DL54 471 aa12.08□□□□□ -0.48
MRPL55-227ENST00000475832 TBC1D3LB9A6J9 549 aa12.08□□□□□ -0.48
MRPL55-227ENST00000475832 GPR39O43194 453 aa12.08□□□□□ -0.48
MRPL55-227ENST00000475832 SPINT1O43278 529 aa12.08□□□□□ -0.48
MRPL55-227ENST00000475832 PLRG1O43660 514 aaKnown RBP12.08□□□□□ -0.48
MRPL55-227ENST00000475832 DCNP07585 359 aaKnown RBP12.08□□□□□ -0.48
MRPL55-227ENST00000475832 TBC1D3HP0C7X1 549 aa12.08□□□□□ -0.48
MRPL55-227ENST00000475832 CBSLP0DN79 551 aa12.08□□□□□ -0.48
MRPL55-227ENST00000475832 TFEBP19484 476 aa12.08□□□□□ -0.48
MRPL55-227ENST00000475832 CBSP35520 551 aa12.08□□□□□ -0.48
MRPL55-227ENST00000475832 MAGEA9P43362 315 aa12.08□□□□□ -0.48
MRPL55-227ENST00000475832 GLRBP48167 497 aa12.08□□□□□ -0.48
MRPL55-227ENST00000475832 STX3Q13277 289 aa12.08□□□□□ -0.48
MRPL55-227ENST00000475832 ANGPT1Q15389 498 aa12.08□□□□□ -0.48
MRPL55-227ENST00000475832 RSPO4Q2I0M5 234 aaPredicted RBP12.08□□□□□ -0.48
MRPL55-227ENST00000475832 MAP7D1Q3KQU3 841 aa12.08□□□□□ -0.48
MRPL55-227ENST00000475832 TBC1D3GQ6DHY5 549 aa12.08□□□□□ -0.48
MRPL55-227ENST00000475832 TBC1D3CQ6IPX1 549 aa12.08□□□□□ -0.48
MRPL55-227ENST00000475832 PAQR3Q6TCH7 311 aa12.08□□□□□ -0.48
MRPL55-227ENST00000475832 ZYG11AQ6WRX3 759 aa12.08□□□□□ -0.48
MRPL55-227ENST00000475832 MAMSTRQ6ZN01 415 aa12.08□□□□□ -0.48
MRPL55-227ENST00000475832 PIM3Q86V86 326 aa12.08□□□□□ -0.48
MRPL55-227ENST00000475832 SLC22A9Q8IVM8 553 aa12.08□□□□□ -0.48
MRPL55-227ENST00000475832 TBC1D3Q8IZP1 549 aaPredicted RBP12.08□□□□□ -0.48
MRPL55-227ENST00000475832 CENPLQ8N0S6 344 aaPredicted RBP12.08□□□□□ -0.48
MRPL55-227ENST00000475832 MYO1HQ8N1T3 1032 aa12.08□□□□□ -0.48
MRPL55-227ENST00000475832 PLD6Q8N2A8 252 aaKnown RBP12.08□□□□□ -0.48
MRPL55-227ENST00000475832 FSTL5Q8N475 847 aaPredicted RBP12.08□□□□□ -0.48
MRPL55-227ENST00000475832 ZBTB2Q8N680 514 aa12.08□□□□□ -0.48
MRPL55-227ENST00000475832 PNPLA1Q8N8W4 532 aa12.08□□□□□ -0.48
MRPL55-227ENST00000475832 DTWD2Q8NBA8 298 aa12.08□□□□□ -0.48
MRPL55-227ENST00000475832 SIDT2Q8NBJ9 832 aaKnown RBP12.08□□□□□ -0.48
MRPL55-227ENST00000475832 STAG3L4Q8TBR4 150 aa12.08□□□□□ -0.48
MRPL55-227ENST00000475832 PPP4R1Q8TF05 950 aa12.08□□□□□ -0.48
MRPL55-227ENST00000475832 ZNF514Q96K75 400 aaPredicted RBP12.08□□□□□ -0.48
MRPL55-227ENST00000475832 BOCQ9BWV1 1114 aa12.08□□□□□ -0.48
MRPL55-227ENST00000475832 DERL2Q9GZP9 239 aa12.08□□□□□ -0.48
MRPL55-227ENST00000475832 FAM107BQ9H098 131 aa12.08□□□□□ -0.48
MRPL55-227ENST00000475832 C12orf65Q9H3J6 166 aaKnown RBP12.08□□□□□ -0.48
MRPL55-227ENST00000475832 TFB2MQ9H5Q4 396 aaKnown RBP12.08□□□□□ -0.48
MRPL55-227ENST00000475832 IGSF5Q9NSI5 407 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms