RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 COG1Q8WTW3 980 aa13.99□□□□□ -0.17
VAMP4-203ENST00000474047 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.99□□□□□ -0.17
VAMP4-203ENST00000474047 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.99□□□□□ -0.17
VAMP4-203ENST00000474047 RDH14Q9HBH5 336 aa13.99□□□□□ -0.17
VAMP4-203ENST00000474047 SARS2Q9NP81 518 aaKnown RBP13.99□□□□□ -0.17
VAMP4-203ENST00000474047 CASS4Q9NQ75 786 aa13.99□□□□□ -0.17
VAMP4-203ENST00000474047 EIF2B3Q9NR50 452 aaKnown RBP13.99□□□□□ -0.17
VAMP4-203ENST00000474047 AKAP7Q9P0M2 348 aaPredicted RBP13.99□□□□□ -0.17
VAMP4-203ENST00000474047 CPNE7Q9UBL6 633 aa13.99□□□□□ -0.17
VAMP4-203ENST00000474047 DKK4Q9UBT3 224 aa13.99□□□□□ -0.17
VAMP4-203ENST00000474047 SATB2Q9UPW6 733 aa13.99□□□□□ -0.17
VAMP4-203ENST00000474047 AKAP13Q12802 2813 aa13.99□□□□□ -0.17
VAMP4-203ENST00000474047 CCDC187A0A096LP49 1063 aa13.98□□□□□ -0.17
VAMP4-203ENST00000474047 MROH6A6NGR9 719 aa13.98□□□□□ -0.17
VAMP4-203ENST00000474047 BRINP1O60477 761 aa13.98□□□□□ -0.17
VAMP4-203ENST00000474047 KRT14P02533 472 aa13.98□□□□□ -0.17
VAMP4-203ENST00000474047 TCP1P17987 556 aaKnown RBP13.98□□□□□ -0.17
VAMP4-203ENST00000474047 CA5AP35218 305 aa13.98□□□□□ -0.17
VAMP4-203ENST00000474047 COILP38432 576 aaPredicted RBP13.98□□□□□ -0.17
VAMP4-203ENST00000474047 MAPK9P45984 424 aa13.98□□□□□ -0.17
VAMP4-203ENST00000474047 LSSP48449 732 aa13.98□□□□□ -0.17
VAMP4-203ENST00000474047 CTSCP53634 463 aa13.98□□□□□ -0.17
VAMP4-203ENST00000474047 DRG2P55039 364 aaKnown RBP13.98□□□□□ -0.17
VAMP4-203ENST00000474047 SESN2P58004 480 aaPredicted RBP13.98□□□□□ -0.17
VAMP4-203ENST00000474047 SARNPP82979 210 aaKnown RBP13.98□□□□□ -0.17
VAMP4-203ENST00000474047 GPS1Q13098 491 aa13.98□□□□□ -0.17
VAMP4-203ENST00000474047 CCDC137Q6PK04 289 aaKnown RBP13.98□□□□□ -0.17
VAMP4-203ENST00000474047 NLRP9Q7RTR0 991 aa13.98□□□□□ -0.17
VAMP4-203ENST00000474047 ZNF761Q86XN6 746 aaPredicted RBP13.98□□□□□ -0.17
VAMP4-203ENST00000474047 PROSER1Q86XN7 944 aa13.98□□□□□ -0.17
VAMP4-203ENST00000474047 WDR36Q8NI36 951 aaKnown RBP13.98□□□□□ -0.17
VAMP4-203ENST00000474047 ACTRT1Q8TDG2 376 aa13.98□□□□□ -0.17
VAMP4-203ENST00000474047 CXorf40BQ96DE9 158 aa13.98□□□□□ -0.17
VAMP4-203ENST00000474047 TTC1Q99614 292 aa13.98□□□□□ -0.17
VAMP4-203ENST00000474047 SMARCAL1Q9NZC9 954 aa13.98□□□□□ -0.17
VAMP4-203ENST00000474047 FAM8A1Q9UBU6 413 aa13.98□□□□□ -0.17
VAMP4-203ENST00000474047 PYCARDQ9ULZ3 195 aa13.98□□□□□ -0.17
VAMP4-203ENST00000474047 MAP1BP46821 2468 aaKnown RBP13.98□□□□□ -0.17
VAMP4-203ENST00000474047 H7C0S8 307 aa13.98□□□□□ -0.17
VAMP4-203ENST00000474047 AGRPO00253 132 aa13.98□□□□□ -0.17
VAMP4-203ENST00000474047 CES2O00748 559 aa13.98□□□□□ -0.17
VAMP4-203ENST00000474047 ATP1B2P14415 290 aaPredicted RBP13.98□□□□□ -0.17
VAMP4-203ENST00000474047 PRAMEP78395 509 aa13.98□□□□□ -0.17
VAMP4-203ENST00000474047 TSTD2Q5T7W7 516 aa13.98□□□□□ -0.17
VAMP4-203ENST00000474047 NKAIN2Q5VXU1 208 aa13.98□□□□□ -0.17
VAMP4-203ENST00000474047 B3GNT8Q7Z7M8 397 aa13.98□□□□□ -0.17
VAMP4-203ENST00000474047 SERPINA9Q86WD7 417 aa13.98□□□□□ -0.17
VAMP4-203ENST00000474047 BEND7Q8N7W2 519 aaPredicted RBP13.98□□□□□ -0.17
VAMP4-203ENST00000474047 OR6P1Q8NGX9 317 aa13.98□□□□□ -0.17
VAMP4-203ENST00000474047 GRK7Q8WTQ7 553 aa13.98□□□□□ -0.17
VAMP4-203ENST00000474047 RANBP9Q96S59 729 aa13.98□□□□□ -0.17
VAMP4-203ENST00000474047 ZDHHC3Q9NYG2 299 aa13.98□□□□□ -0.17
VAMP4-203ENST00000474047 BFARQ9NZS9 450 aa13.98□□□□□ -0.17
VAMP4-203ENST00000474047 IGHV1OR21-1A0A087WYE8 117 aa13.97□□□□□ -0.17
VAMP4-203ENST00000474047 KLHL33A6NCF5 533 aa13.97□□□□□ -0.17
VAMP4-203ENST00000474047 A6NCN8 305 aa13.97□□□□□ -0.17
VAMP4-203ENST00000474047 ZNF185O15231 689 aa13.97□□□□□ -0.17
VAMP4-203ENST00000474047 DUX1O43812 170 aa13.97□□□□□ -0.17
VAMP4-203ENST00000474047 XRCC1P18887 633 aaPredicted RBP13.97□□□□□ -0.17
VAMP4-203ENST00000474047 ACRV1P26436 265 aa13.97□□□□□ -0.17
VAMP4-203ENST00000474047 CD1CP29017 333 aa13.97□□□□□ -0.17
VAMP4-203ENST00000474047 NPY2RP49146 381 aa13.97□□□□□ -0.17
VAMP4-203ENST00000474047 CDKN1CP49918 316 aaPredicted RBP13.97□□□□□ -0.17
VAMP4-203ENST00000474047 GPLD1P80108 840 aa13.97□□□□□ -0.17
VAMP4-203ENST00000474047 CDK16Q00536 496 aa13.97□□□□□ -0.17
VAMP4-203ENST00000474047 NR1D2Q14995 579 aa13.97□□□□□ -0.17
VAMP4-203ENST00000474047 CLPPQ16740 277 aaPredicted RBP13.97□□□□□ -0.17
VAMP4-203ENST00000474047 PCID2Q5JVF3 399 aa13.97□□□□□ -0.17
VAMP4-203ENST00000474047 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.97□□□□□ -0.17
VAMP4-203ENST00000474047 C11orf96Q7Z7L8 435 aa13.97□□□□□ -0.17
VAMP4-203ENST00000474047 FBXO39Q8N4B4 442 aa13.97□□□□□ -0.17
VAMP4-203ENST00000474047 HDAC10Q969S8 669 aa13.97□□□□□ -0.17
VAMP4-203ENST00000474047 LIN37Q96GY3 246 aaPredicted RBP13.97□□□□□ -0.17
VAMP4-203ENST00000474047 DPYSL5Q9BPU6 564 aa13.97□□□□□ -0.17
VAMP4-203ENST00000474047 VPS37BQ9H9H4 285 aa13.97□□□□□ -0.17
VAMP4-203ENST00000474047 ANAPC5Q9UJX4 755 aa13.97□□□□□ -0.17
VAMP4-203ENST00000474047 RAXQ9Y2V3 346 aa13.97□□□□□ -0.17
VAMP4-203ENST00000474047 ZNF106Q9H2Y7 1883 aaKnown RBP13.97□□□□□ -0.17
VAMP4-203ENST00000474047 CCDC162PA2VCL2 907 aa13.96□□□□□ -0.17
VAMP4-203ENST00000474047 MGAT4DA6NG13 374 aa13.96□□□□□ -0.17
VAMP4-203ENST00000474047 SRRM3A6NNA2 597 aaPredicted RBP13.96□□□□□ -0.17
VAMP4-203ENST00000474047 AGAP14A8MT82 685 aa13.96□□□□□ -0.17
VAMP4-203ENST00000474047 PHF2O75151 1096 aa13.96□□□□□ -0.17
VAMP4-203ENST00000474047 JMJD7P0C870 316 aa13.96□□□□□ -0.17
VAMP4-203ENST00000474047 CCKBRP32239 447 aa13.96□□□□□ -0.17
VAMP4-203ENST00000474047 EIF3IQ13347 325 aaKnown RBP13.96□□□□□ -0.17
VAMP4-203ENST00000474047 NFE2L1Q14494 772 aa13.96□□□□□ -0.17
VAMP4-203ENST00000474047 AGAP9Q5VTM2 703 aa13.96□□□□□ -0.17
VAMP4-203ENST00000474047 TTC27Q6P3X3 843 aa13.96□□□□□ -0.17
VAMP4-203ENST00000474047 ZNF449Q6P9G9 518 aa13.96□□□□□ -0.17
VAMP4-203ENST00000474047 ABRAXAS1Q6UWZ7 409 aa13.96□□□□□ -0.17
VAMP4-203ENST00000474047 WASH2PQ6VEQ5 465 aa13.96□□□□□ -0.17
VAMP4-203ENST00000474047 RAB11FIP2Q7L804 512 aa13.96□□□□□ -0.17
VAMP4-203ENST00000474047 NAT14Q8WUY8 206 aa13.96□□□□□ -0.17
VAMP4-203ENST00000474047 CAPZA3Q96KX2 299 aa13.96□□□□□ -0.17
VAMP4-203ENST00000474047 DCBLD2Q96PD2 775 aa13.96□□□□□ -0.17
VAMP4-203ENST00000474047 NAPGQ99747 312 aaPredicted RBP13.96□□□□□ -0.17
VAMP4-203ENST00000474047 IL22Q9GZX6 179 aa13.96□□□□□ -0.17
VAMP4-203ENST00000474047 WASH6PQ9NQA3 447 aa13.96□□□□□ -0.17
VAMP4-203ENST00000474047 SCHIP1Q9P0W5 487 aaPredicted RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms