RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 GALNT1Q10472 559 aaPredicted RBP5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 KLF10Q13118 480 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 STX5Q13190 355 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 PLD1Q13393 1074 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 SQLEQ14534 574 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 DLG2Q15700 870 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 PDCD2Q16342 344 aaPredicted RBP5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 GSTA3Q16772 222 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 GEN1Q17RS7 908 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 USP41Q3LFD5 358 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 MMEL1Q495T6 779 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 KHDC1Q4VXA5 237 aaKnown RBP5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 ACSBG2Q5FVE4 666 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 ARL13AQ5H913 290 aaPredicted RBP5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 RARS2Q5T160 578 aaKnown RBP5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 FAM182AQ5T1J6 154 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 HECTD3Q5T447 861 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 HECTD2Q5U5R9 776 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 SDHAF4Q5VUM1 108 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 DENND5AQ6IQ26 1287 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 TLDC1Q6P9B6 456 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 RFWD3Q6PCD5 774 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 KLHDC10Q6PID8 442 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 AFTPHQ6ULP2 937 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 ZNF783Q6ZMS7 281 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 CHST9Q7L1S5 443 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 PTAR1Q7Z6K3 402 aaPredicted RBP5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 C14orf80Q86SX3 495 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 DENND6AQ8IWF6 608 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 DEFB107AQ8IZN7 70 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 FBXW8Q8N3Y1 598 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 CPSF7Q8N684 471 aaKnown RBP5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 TEX26Q8N6G2 289 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 OR6Y1Q8NGX8 325 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 PIP4K2CQ8TBX8 421 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 AGR3Q8TD06 166 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 MICAL1Q8TDZ2 1067 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 SLC26A7Q8TE54 656 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 DLG3Q92796 817 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 PSMG2Q969U7 264 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 NXNL1Q96CM4 212 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 RMDN1Q96DB5 314 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 ZNF184Q99676 751 aaPredicted RBP5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 SEMA3CQ99985 751 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 MCMBPQ9BTE3 642 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 C20orf27Q9GZN8 174 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 NOL6Q9H6R4 1146 aaKnown RBP5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 CNTD2Q9H8S5 307 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 CYP4F11Q9HBI6 524 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 CATSPERZQ9NTU4 200 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 SPATS2LQ9NUQ6 558 aaKnown RBP5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 INTS10Q9NVR2 710 aaKnown RBP5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 GEMIN8Q9NWZ8 242 aaKnown RBP5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 OSER1Q9NX31 292 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 HSFX1Q9UBD0 423 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 PLA2G4CQ9UP65 541 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 NEU3Q9UQ49 428 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 SSX2IPQ9Y2D8 614 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 TRIP12Q14669 1992 aaPredicted RBP5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 TDRD15B5MCY1 1934 aaKnown RBP5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 LOC100653049A0A140TA62 436 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 A0A1B0GVM2 712 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 J3KR12 359 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 ENPP3O14638 875 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 AIM2O14862 343 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 UBDO15205 165 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 CD3EAPO15446 510 aaKnown RBP5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 KIF1CO43896 1103 aaKnown RBP5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 DLX3O60479 287 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 VPS26AO75436 327 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 SOAT2O75908 522 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 KRT34O76011 436 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 LATS1O95835 1130 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 GSRP00390 522 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 IGLV3-27P01718 113 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 AMHP03971 560 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 S100BP04271 92 aaPredicted RBP5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 PRKCGP05129 697 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 CD3EP07766 207 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 CCDC166P0CW27 439 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 HSPA8P11142 646 aaKnown RBP5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 TFEBP19484 476 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 HSPA13P48723 471 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 SLC11A1P49279 550 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 GPR15P49685 360 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 SH3BGRP55822 239 aaPredicted RBP5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 MAXP61244 160 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 ATP6V0D1P61421 351 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 SLC25A3Q00325 362 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 PFKPQ01813 784 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 CREMQ03060 361 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 GNA12Q03113 381 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 MVKQ03426 396 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 NSUN2Q08J23 767 aaKnown RBP eCLIP5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 SLC10A7Q0GE19 358 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 CDC16Q13042 620 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 TAF1AQ15573 450 aaPredicted RBP5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 SLC9B1Q4ZJI4 515 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 SIRPB2Q5JXA9 342 aa5.85□□□□□ -1.47
ATPAF1-204ENST00000474020 SPOUT1Q5T280 376 aaKnown RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms