RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 PDZK1P1A8MUH7 402 aa22.18■■□□□ 1.14
PTP4A1-203ENST00000473334 NVLO15381 856 aaKnown RBP22.18■■□□□ 1.14
PTP4A1-203ENST00000473334 KCNJ13O60928 360 aa22.18■■□□□ 1.14
PTP4A1-203ENST00000473334 THRAP10827 490 aa22.18■■□□□ 1.14
PTP4A1-203ENST00000473334 XRCC1P18887 633 aaPredicted RBP22.18■■□□□ 1.14
PTP4A1-203ENST00000473334 IDSP22304 550 aa22.18■■□□□ 1.14
PTP4A1-203ENST00000473334 MAPK10P53779 464 aa22.18■■□□□ 1.14
PTP4A1-203ENST00000473334 UCNP55089 124 aa22.18■■□□□ 1.14
PTP4A1-203ENST00000473334 RPS6KA1Q15418 735 aa22.18■■□□□ 1.14
PTP4A1-203ENST00000473334 SEPT7Q16181 437 aaKnown RBP22.18■■□□□ 1.14
PTP4A1-203ENST00000473334 WASH2PQ6VEQ5 465 aa22.18■■□□□ 1.14
PTP4A1-203ENST00000473334 SLC13A5Q86YT5 568 aaPredicted RBP22.18■■□□□ 1.14
PTP4A1-203ENST00000473334 TRIM48Q8IWZ4 208 aa22.18■■□□□ 1.14
PTP4A1-203ENST00000473334 RASGEF1AQ8N9B8 481 aa22.18■■□□□ 1.14
PTP4A1-203ENST00000473334 OR13C4Q8NGS5 318 aa22.18■■□□□ 1.14
PTP4A1-203ENST00000473334 RTP4Q96DX8 246 aa22.18■■□□□ 1.14
PTP4A1-203ENST00000473334 FCRL3Q96P31 734 aaPredicted RBP22.18■■□□□ 1.14
PTP4A1-203ENST00000473334 ALS2CR12Q96Q35 445 aa22.18■■□□□ 1.14
PTP4A1-203ENST00000473334 LZTFL1Q9NQ48 299 aa22.18■■□□□ 1.14
PTP4A1-203ENST00000473334 WASH6PQ9NQA3 447 aa22.18■■□□□ 1.14
PTP4A1-203ENST00000473334 TMEM9Q9P0T7 183 aa22.18■■□□□ 1.14
PTP4A1-203ENST00000473334 ACSL6Q9UKU0 697 aa22.18■■□□□ 1.14
PTP4A1-203ENST00000473334 LILRA5A6NI73 299 aa22.17■■□□□ 1.14
PTP4A1-203ENST00000473334 PSMD3O43242 534 aa22.17■■□□□ 1.14
PTP4A1-203ENST00000473334 LIASO43766 372 aa22.17■■□□□ 1.14
PTP4A1-203ENST00000473334 SRP72O76094 671 aaKnown RBP22.17■■□□□ 1.14
PTP4A1-203ENST00000473334 AKT1P31749 480 aa22.17■■□□□ 1.14
PTP4A1-203ENST00000473334 ZNF140P52738 457 aaPredicted RBP22.17■■□□□ 1.14
PTP4A1-203ENST00000473334 CTSCP53634 463 aa22.17■■□□□ 1.14
PTP4A1-203ENST00000473334 OASLQ15646 514 aaKnown RBP22.17■■□□□ 1.14
PTP4A1-203ENST00000473334 AGAP9Q5VTM2 703 aa22.17■■□□□ 1.14
PTP4A1-203ENST00000473334 WDR74Q6RFH5 385 aaPredicted RBP22.17■■□□□ 1.14
PTP4A1-203ENST00000473334 ABRAXAS1Q6UWZ7 409 aa22.17■■□□□ 1.14
PTP4A1-203ENST00000473334 EPB41L1Q9H4G0 881 aa22.17■■□□□ 1.14
PTP4A1-203ENST00000473334 ASB8Q9H765 288 aa22.17■■□□□ 1.14
PTP4A1-203ENST00000473334 UCK1Q9HA47 277 aa22.17■■□□□ 1.14
PTP4A1-203ENST00000473334 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.17■■□□□ 1.14
PTP4A1-203ENST00000473334 PDP2Q9P2J9 529 aa22.17■■□□□ 1.14
PTP4A1-203ENST00000473334 DNMT3AQ9Y6K1 912 aaPredicted RBP22.17■■□□□ 1.14
PTP4A1-203ENST00000473334 LOC400499M0QZD8 3231 aa22.17■■□□□ 1.14
PTP4A1-203ENST00000473334 NRDCO43847 1150 aa22.16■■□□□ 1.14
PTP4A1-203ENST00000473334 AP2A1O95782 977 aa22.16■■□□□ 1.14
PTP4A1-203ENST00000473334 VIPP01282 170 aa22.16■■□□□ 1.14
PTP4A1-203ENST00000473334 BRAFP15056 766 aa22.16■■□□□ 1.14
PTP4A1-203ENST00000473334 MSH3P20585 1137 aa22.16■■□□□ 1.14
PTP4A1-203ENST00000473334 MPSTP25325 297 aa22.16■■□□□ 1.14
PTP4A1-203ENST00000473334 RPL10P27635 214 aaKnown RBP22.16■■□□□ 1.14
PTP4A1-203ENST00000473334 STIP1P31948 543 aaKnown RBP22.16■■□□□ 1.14
PTP4A1-203ENST00000473334 HADHAP40939 763 aa22.16■■□□□ 1.14
PTP4A1-203ENST00000473334 SLC19A1P41440 591 aa22.16■■□□□ 1.14
PTP4A1-203ENST00000473334 MAPK9P45984 424 aa22.16■■□□□ 1.14
PTP4A1-203ENST00000473334 TMPRSS3P57727 454 aa22.16■■□□□ 1.14
PTP4A1-203ENST00000473334 CXADRP78310 365 aa22.16■■□□□ 1.14
PTP4A1-203ENST00000473334 CCZ1BP86790 482 aa22.16■■□□□ 1.14
PTP4A1-203ENST00000473334 CCZ1P86791 482 aaPredicted RBP22.16■■□□□ 1.14
PTP4A1-203ENST00000473334 XIAPP98170 497 aa22.16■■□□□ 1.14
PTP4A1-203ENST00000473334 DMPKQ09013 629 aa22.16■■□□□ 1.14
PTP4A1-203ENST00000473334 LONRF2Q1L5Z9 754 aa22.16■■□□□ 1.14
PTP4A1-203ENST00000473334 TMEM220Q6QAJ8 160 aa22.16■■□□□ 1.14
PTP4A1-203ENST00000473334 AMZ2Q86W34 360 aa22.16■■□□□ 1.14
PTP4A1-203ENST00000473334 AGBL5Q8NDL9 886 aa22.16■■□□□ 1.14
PTP4A1-203ENST00000473334 NCSTNQ92542 709 aa22.16■■□□□ 1.14
PTP4A1-203ENST00000473334 USP7Q93009 1102 aa22.16■■□□□ 1.14
PTP4A1-203ENST00000473334 ZNF514Q96K75 400 aaPredicted RBP22.16■■□□□ 1.14
PTP4A1-203ENST00000473334 TBC1D10AQ9BXI6 508 aa22.16■■□□□ 1.14
PTP4A1-203ENST00000473334 POT1Q9NUX5 634 aa22.16■■□□□ 1.14
PTP4A1-203ENST00000473334 ZNF624Q9P2J8 865 aaPredicted RBP22.16■■□□□ 1.14
PTP4A1-203ENST00000473334 SSUH2Q9Y2M2 353 aa22.16■■□□□ 1.14
PTP4A1-203ENST00000473334 PRAMEF33A0A0G2JMD5 474 aa22.15■■□□□ 1.14
PTP4A1-203ENST00000473334 OR2AG2A6NM03 316 aa22.15■■□□□ 1.14
PTP4A1-203ENST00000473334 LDB2O43679 373 aa22.15■■□□□ 1.14
PTP4A1-203ENST00000473334 PRAMEF10O60809 474 aa22.15■■□□□ 1.14
PTP4A1-203ENST00000473334 POP7O75817 140 aaKnown RBP22.15■■□□□ 1.14
PTP4A1-203ENST00000473334 CCL4P13236 92 aa22.15■■□□□ 1.14
PTP4A1-203ENST00000473334 CSTF2P33240 577 aaKnown RBP eCLIP22.15■■□□□ 1.14
PTP4A1-203ENST00000473334 DRG2P55039 364 aaKnown RBP22.15■■□□□ 1.14
PTP4A1-203ENST00000473334 TMPRSS15P98073 1019 aa22.15■■□□□ 1.14
PTP4A1-203ENST00000473334 CLN3Q13286 438 aa22.15■■□□□ 1.14
PTP4A1-203ENST00000473334 TMEM26Q6ZUK4 368 aa22.15■■□□□ 1.14
PTP4A1-203ENST00000473334 GPR155Q7Z3F1 870 aa22.15■■□□□ 1.14
PTP4A1-203ENST00000473334 ULK4Q96C45 1275 aa22.15■■□□□ 1.14
PTP4A1-203ENST00000473334 B3GNT4Q9C0J1 378 aa22.15■■□□□ 1.14
PTP4A1-203ENST00000473334 CRLS1Q9UJA2 301 aa22.15■■□□□ 1.14
PTP4A1-203ENST00000473334 IGSF10Q6WRI0 2623 aa22.14■■□□□ 1.14
PTP4A1-203ENST00000473334 AGAP14A8MT82 685 aa22.14■■□□□ 1.13
PTP4A1-203ENST00000473334 C9orf172C9J069 976 aa22.14■■□□□ 1.13
PTP4A1-203ENST00000473334 ITGALP20701 1170 aa22.14■■□□□ 1.13
PTP4A1-203ENST00000473334 HALP42357 657 aa22.14■■□□□ 1.13
PTP4A1-203ENST00000473334 TMEM164Q5U3C3 297 aa22.14■■□□□ 1.13
PTP4A1-203ENST00000473334 TAB3Q8N5C8 712 aaPredicted RBP22.14■■□□□ 1.13
PTP4A1-203ENST00000473334 C1orf54Q8WWF1 131 aa22.14■■□□□ 1.13
PTP4A1-203ENST00000473334 CXorf40BQ96DE9 158 aa22.14■■□□□ 1.13
PTP4A1-203ENST00000473334 ZNF148Q9UQR1 794 aa22.14■■□□□ 1.13
PTP4A1-203ENST00000473334 OR52A4PA6NMU1 304 aa22.13■■□□□ 1.13
PTP4A1-203ENST00000473334 FGF3P11487 239 aaPredicted RBP22.13■■□□□ 1.13
PTP4A1-203ENST00000473334 FNBP1LQ5T0N5 605 aa22.13■■□□□ 1.13
PTP4A1-203ENST00000473334 DET1Q7L5Y6 550 aa22.13■■□□□ 1.13
PTP4A1-203ENST00000473334 SNX20Q7Z614 316 aa22.13■■□□□ 1.13
PTP4A1-203ENST00000473334 LINC00523Q86TU6 105 aa22.13■■□□□ 1.13
PTP4A1-203ENST00000473334 RBM12BQ8IXT5 1001 aaKnown RBP22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms