RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 ABCG1P45844 678 aa12.93□□□□□ -0.34
TPM3-216ENST00000473036 CYP4F3Q08477 520 aa12.93□□□□□ -0.34
TPM3-216ENST00000473036 SEMA3AQ14563 771 aa12.93□□□□□ -0.34
TPM3-216ENST00000473036 PLA2G4EQ3MJ16 856 aa12.93□□□□□ -0.34
TPM3-216ENST00000473036 CCDC157Q569K6 752 aa12.93□□□□□ -0.34
TPM3-216ENST00000473036 CRTC3Q6UUV7 619 aa12.93□□□□□ -0.34
TPM3-216ENST00000473036 CES3Q6UWW8 571 aa12.93□□□□□ -0.34
TPM3-216ENST00000473036 DHRS13Q6UX07 377 aa12.93□□□□□ -0.34
TPM3-216ENST00000473036 CHST15Q7LFX5 561 aaPredicted RBP12.93□□□□□ -0.34
TPM3-216ENST00000473036 SNX20Q7Z614 316 aa12.93□□□□□ -0.34
TPM3-216ENST00000473036 GKN2Q86XP6 184 aa12.93□□□□□ -0.34
TPM3-216ENST00000473036 NAGSQ8N159 534 aa12.93□□□□□ -0.34
TPM3-216ENST00000473036 SDR16C5Q8N3Y7 309 aa12.93□□□□□ -0.34
TPM3-216ENST00000473036 BEND7Q8N7W2 519 aaPredicted RBP12.93□□□□□ -0.34
TPM3-216ENST00000473036 HDAC10Q969S8 669 aa12.93□□□□□ -0.34
TPM3-216ENST00000473036 LRRC45Q96CN5 670 aa12.93□□□□□ -0.34
TPM3-216ENST00000473036 SERPINB12Q96P63 405 aa12.93□□□□□ -0.34
TPM3-216ENST00000473036 KRT12Q99456 494 aa12.93□□□□□ -0.34
TPM3-216ENST00000473036 TREX1Q9NSU2 369 aa12.93□□□□□ -0.34
TPM3-216ENST00000473036 TBC1D29Q9UFV1 150 aa12.93□□□□□ -0.34
TPM3-216ENST00000473036 KCNK6Q9Y257 313 aa12.93□□□□□ -0.34
TPM3-216ENST00000473036 PRSS21Q9Y6M0 314 aa12.93□□□□□ -0.34
TPM3-216ENST00000473036 CFAP46Q8IYW2 2715 aa12.93□□□□□ -0.34
TPM3-216ENST00000473036 IGLV3-16A0A075B6K0 115 aa12.92□□□□□ -0.34
TPM3-216ENST00000473036 HEATR9A2RTY3 570 aa12.92□□□□□ -0.34
TPM3-216ENST00000473036 B4DGG1 531 aa12.92□□□□□ -0.34
TPM3-216ENST00000473036 DNALI1O14645 258 aaPredicted RBP12.92□□□□□ -0.34
TPM3-216ENST00000473036 VEGFDO43915 354 aa12.92□□□□□ -0.34
TPM3-216ENST00000473036 BANF1O75531 89 aa12.92□□□□□ -0.34
TPM3-216ENST00000473036 CDK14O94921 469 aa12.92□□□□□ -0.34
TPM3-216ENST00000473036 TUBBP07437 444 aa12.92□□□□□ -0.34
TPM3-216ENST00000473036 HADHAP40939 763 aa12.92□□□□□ -0.34
TPM3-216ENST00000473036 ACTR1BP42025 376 aa12.92□□□□□ -0.34
TPM3-216ENST00000473036 MAZP56270 477 aaKnown RBP12.92□□□□□ -0.34
TPM3-216ENST00000473036 ACTR1AP61163 376 aa12.92□□□□□ -0.34
TPM3-216ENST00000473036 CDK16Q00536 496 aa12.92□□□□□ -0.34
TPM3-216ENST00000473036 PDE1BQ01064 536 aa12.92□□□□□ -0.34
TPM3-216ENST00000473036 C2orf54Q08AI8 447 aa12.92□□□□□ -0.34
TPM3-216ENST00000473036 ITGA9Q13797 1035 aa12.92□□□□□ -0.34
TPM3-216ENST00000473036 HLTFQ14527 1009 aaKnown RBP eCLIP12.92□□□□□ -0.34
TPM3-216ENST00000473036 PPP1R7Q15435 360 aa12.92□□□□□ -0.34
TPM3-216ENST00000473036 MSS51Q4VC12 460 aa12.92□□□□□ -0.34
TPM3-216ENST00000473036 PCID2Q5JVF3 399 aa12.92□□□□□ -0.34
TPM3-216ENST00000473036 TMEM220Q6QAJ8 160 aa12.92□□□□□ -0.34
TPM3-216ENST00000473036 FAM83HQ6ZRV2 1179 aaPredicted RBP12.92□□□□□ -0.34
TPM3-216ENST00000473036 DET1Q7L5Y6 550 aa12.92□□□□□ -0.34
TPM3-216ENST00000473036 EFL1Q7Z2Z2 1120 aaKnown RBP12.92□□□□□ -0.34
TPM3-216ENST00000473036 SERPINA9Q86WD7 417 aa12.92□□□□□ -0.34
TPM3-216ENST00000473036 JAMLQ86YT9 394 aa12.92□□□□□ -0.34
TPM3-216ENST00000473036 NXPE1Q8N323 547 aa12.92□□□□□ -0.34
TPM3-216ENST00000473036 MMGT1Q8N4V1 131 aa12.92□□□□□ -0.34
TPM3-216ENST00000473036 ARL10Q8N8L6 244 aa12.92□□□□□ -0.34
TPM3-216ENST00000473036 MCUQ8NE86 351 aa12.92□□□□□ -0.34
TPM3-216ENST00000473036 IFI44Q8TCB0 444 aa12.92□□□□□ -0.34
TPM3-216ENST00000473036 NXPE2Q96DL1 559 aa12.92□□□□□ -0.34
TPM3-216ENST00000473036 MFSD3Q96ES6 412 aa12.92□□□□□ -0.34
TPM3-216ENST00000473036 SGF29Q96ES7 293 aa12.92□□□□□ -0.34
TPM3-216ENST00000473036 PWWP2AQ96N64 755 aa12.92□□□□□ -0.34
TPM3-216ENST00000473036 FCRL3Q96P31 734 aaPredicted RBP12.92□□□□□ -0.34
TPM3-216ENST00000473036 KIFC1Q9BW19 673 aa12.92□□□□□ -0.34
TPM3-216ENST00000473036 GSDMCQ9BYG8 508 aa12.92□□□□□ -0.34
TPM3-216ENST00000473036 DPEP2Q9H4A9 486 aa12.92□□□□□ -0.34
TPM3-216ENST00000473036 RMI1Q9H9A7 625 aa12.92□□□□□ -0.34
TPM3-216ENST00000473036 SCHIP1Q9P0W5 487 aaPredicted RBP12.92□□□□□ -0.34
TPM3-216ENST00000473036 MARCH4Q9P2E8 410 aaPredicted RBP12.92□□□□□ -0.34
TPM3-216ENST00000473036 APPL1Q9UKG1 709 aa12.92□□□□□ -0.34
TPM3-216ENST00000473036 RIMKLBQ9ULI2 386 aa12.92□□□□□ -0.34
TPM3-216ENST00000473036 KIF26BQ2KJY2 2108 aa12.92□□□□□ -0.34
TPM3-216ENST00000473036 TRBV23OR9-2A0A075B6M9 112 aa12.91□□□□□ -0.34
TPM3-216ENST00000473036 CPED1A4D0V7 1026 aa12.91□□□□□ -0.34
TPM3-216ENST00000473036 FAM187AA6NFU0 413 aa12.91□□□□□ -0.34
TPM3-216ENST00000473036 OR2AG2A6NM03 316 aa12.91□□□□□ -0.34
TPM3-216ENST00000473036 EFCAB8A8MWE9 144 aa12.91□□□□□ -0.34
TPM3-216ENST00000473036 ATXN7O15265 892 aaPredicted RBP12.91□□□□□ -0.34
TPM3-216ENST00000473036 RFPL3O75679 317 aa12.91□□□□□ -0.34
TPM3-216ENST00000473036 GOT2P00505 430 aaKnown RBP12.91□□□□□ -0.34
TPM3-216ENST00000473036 BRAFP15056 766 aa12.91□□□□□ -0.34
TPM3-216ENST00000473036 ACRV1P26436 265 aa12.91□□□□□ -0.34
TPM3-216ENST00000473036 NPY2RP49146 381 aa12.91□□□□□ -0.34
TPM3-216ENST00000473036 DAB2P98082 770 aa12.91□□□□□ -0.34
TPM3-216ENST00000473036 INSM1Q01101 510 aaPredicted RBP12.91□□□□□ -0.34
TPM3-216ENST00000473036 DR1Q01658 176 aa12.91□□□□□ -0.34
TPM3-216ENST00000473036 ILF3Q12906 894 aaKnown RBP eCLIP12.91□□□□□ -0.34
TPM3-216ENST00000473036 NR0B2Q15466 257 aa12.91□□□□□ -0.34
TPM3-216ENST00000473036 DBN1Q16643 649 aa12.91□□□□□ -0.34
TPM3-216ENST00000473036 SKIDA1Q1XH10 827 aa12.91□□□□□ -0.34
TPM3-216ENST00000473036 ZNF658BQ4V348 819 aaPredicted RBP12.91□□□□□ -0.34
TPM3-216ENST00000473036 ZRANB3Q5FWF4 1079 aa12.91□□□□□ -0.34
TPM3-216ENST00000473036 LDLRAP1Q5SW96 308 aa12.91□□□□□ -0.34
TPM3-216ENST00000473036 FNBP1LQ5T0N5 605 aa12.91□□□□□ -0.34
TPM3-216ENST00000473036 LDB1Q86U70 411 aaPredicted RBP12.91□□□□□ -0.34
TPM3-216ENST00000473036 LRRTM4Q86VH4 590 aa12.91□□□□□ -0.34
TPM3-216ENST00000473036 GDAP1Q8TB36 358 aa12.91□□□□□ -0.34
TPM3-216ENST00000473036 ZDHHC1Q8WTX9 485 aa12.91□□□□□ -0.34
TPM3-216ENST00000473036 SIGLEC10Q96LC7 697 aa12.91□□□□□ -0.34
TPM3-216ENST00000473036 WDR83Q9BRX9 315 aaKnown RBP12.91□□□□□ -0.34
TPM3-216ENST00000473036 IL22Q9GZX6 179 aa12.91□□□□□ -0.34
TPM3-216ENST00000473036 RAB17Q9H0T7 212 aa12.91□□□□□ -0.34
TPM3-216ENST00000473036 PLAC1Q9HBJ0 212 aa12.91□□□□□ -0.34
TPM3-216ENST00000473036 PRDM8Q9NQV8 689 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms