RNA–Protein interactions for RNA: ENST00000472216.2

SPC25-203, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC25, Length 754 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-203ENST00000472216 UQCRHP07919 91 aa9.35□□□□□ -0.91
SPC25-203ENST00000472216 DLATP10515 647 aaKnown RBP9.35□□□□□ -0.91
SPC25-203ENST00000472216 HNF1AP20823 631 aa9.35□□□□□ -0.91
SPC25-203ENST00000472216 CYP2A7P20853 494 aa9.35□□□□□ -0.91
SPC25-203ENST00000472216 SOX11P35716 441 aa9.35□□□□□ -0.91
SPC25-203ENST00000472216 SERPINH1P50454 418 aaKnown RBP9.35□□□□□ -0.91
SPC25-203ENST00000472216 CASP9P55211 416 aa9.35□□□□□ -0.91
SPC25-203ENST00000472216 IHHQ14623 411 aa9.35□□□□□ -0.91
SPC25-203ENST00000472216 ZNF699Q32M78 642 aa9.35□□□□□ -0.91
SPC25-203ENST00000472216 TUBB8Q3ZCM7 444 aa9.35□□□□□ -0.91
SPC25-203ENST00000472216 AGAP9Q5VTM2 703 aa9.35□□□□□ -0.91
SPC25-203ENST00000472216 RNF20Q5VTR2 975 aa9.35□□□□□ -0.91
SPC25-203ENST00000472216 OR5M3Q8NGP4 307 aa9.35□□□□□ -0.91
SPC25-203ENST00000472216 RNASE6Q93091 150 aaKnown RBP9.35□□□□□ -0.91
SPC25-203ENST00000472216 SLC39A13Q96H72 371 aa9.35□□□□□ -0.91
SPC25-203ENST00000472216 RPRD1AQ96P16 312 aaPredicted RBP9.35□□□□□ -0.91
SPC25-203ENST00000472216 USB1Q9BQ65 265 aaKnown RBP9.35□□□□□ -0.91
SPC25-203ENST00000472216 RAB33BQ9H082 229 aa9.35□□□□□ -0.91
SPC25-203ENST00000472216 FANCEQ9HB96 536 aa9.35□□□□□ -0.91
SPC25-203ENST00000472216 LRRC4Q9HBW1 653 aa9.35□□□□□ -0.91
SPC25-203ENST00000472216 PCDHGB1Q9Y5G3 927 aa9.35□□□□□ -0.91
SPC25-203ENST00000472216 ASPDHA6ND91 283 aa9.34□□□□□ -0.91
SPC25-203ENST00000472216 OR5K4A6NMS3 321 aa9.34□□□□□ -0.91
SPC25-203ENST00000472216 VEGFDO43915 354 aa9.34□□□□□ -0.91
SPC25-203ENST00000472216 CLDN11O75508 207 aa9.34□□□□□ -0.91
SPC25-203ENST00000472216 S1PR4O95977 384 aa9.34□□□□□ -0.91
SPC25-203ENST00000472216 HBQ1P09105 142 aa9.34□□□□□ -0.91
SPC25-203ENST00000472216 MMP16P51512 607 aa9.34□□□□□ -0.91
SPC25-203ENST00000472216 COL10A1Q03692 680 aa9.34□□□□□ -0.91
SPC25-203ENST00000472216 ABRQ12979 859 aa9.34□□□□□ -0.91
SPC25-203ENST00000472216 ZRSR1Q15695 479 aaKnown RBP9.34□□□□□ -0.91
SPC25-203ENST00000472216 SGSM1Q2NKQ1 1148 aa9.34□□□□□ -0.91
SPC25-203ENST00000472216 ZFYVE27Q5T4F4 411 aa9.34□□□□□ -0.91
SPC25-203ENST00000472216 FOXD4L5Q5VV16 416 aaPredicted RBP9.34□□□□□ -0.91
SPC25-203ENST00000472216 C20orf204Q6ZNR8 217 aa9.34□□□□□ -0.91
SPC25-203ENST00000472216 IL17RELQ6ZVW7 336 aa9.34□□□□□ -0.91
SPC25-203ENST00000472216 OTOAQ7RTW8 1153 aa9.34□□□□□ -0.91
SPC25-203ENST00000472216 TTC30BQ8N4P2 665 aa9.34□□□□□ -0.91
SPC25-203ENST00000472216 LINC01560Q8TB33 94 aa9.34□□□□□ -0.91
SPC25-203ENST00000472216 FOXD4L4Q8WXT5 416 aaPredicted RBP9.34□□□□□ -0.91
SPC25-203ENST00000472216 RSC1A1Q92681 617 aa9.34□□□□□ -0.91
SPC25-203ENST00000472216 NT5C1AQ9BXI3 368 aa9.34□□□□□ -0.91
SPC25-203ENST00000472216 DNAI2Q9GZS0 605 aa9.34□□□□□ -0.91
SPC25-203ENST00000472216 RMI1Q9H9A7 625 aa9.34□□□□□ -0.91
SPC25-203ENST00000472216 PRDM9Q9NQV7 894 aa9.34□□□□□ -0.91
SPC25-203ENST00000472216 TBC1D29Q9UFV1 150 aa9.34□□□□□ -0.91
SPC25-203ENST00000472216 FOXD3Q9UJU5 478 aaPredicted RBP9.34□□□□□ -0.91
SPC25-203ENST00000472216 EIF3LQ9Y262 564 aaKnown RBP9.34□□□□□ -0.91
SPC25-203ENST00000472216 SLC17A4Q9Y2C5 497 aa9.34□□□□□ -0.91
SPC25-203ENST00000472216 TENM2Q9NT68 2774 aa9.34□□□□□ -0.91
SPC25-203ENST00000472216 CCDC88CQ9P219 2028 aa9.33□□□□□ -0.92
SPC25-203ENST00000472216 A0A1B0GTH9 108 aa9.33□□□□□ -0.92
SPC25-203ENST00000472216 GPRIN2O60269 458 aa9.33□□□□□ -0.92
SPC25-203ENST00000472216 LMX1BO60663 402 aa9.33□□□□□ -0.92
SPC25-203ENST00000472216 ETFDHQ16134 617 aa9.33□□□□□ -0.92
SPC25-203ENST00000472216 ERAP2Q6P179 960 aa9.33□□□□□ -0.92
SPC25-203ENST00000472216 CPLX2Q6PUV4 134 aaKnown RBP9.33□□□□□ -0.92
SPC25-203ENST00000472216 KIRREL2Q6UWL6 708 aa9.33□□□□□ -0.92
SPC25-203ENST00000472216 KIF18BQ86Y91 864 aa9.33□□□□□ -0.92
SPC25-203ENST00000472216 KBTBD2Q8IY47 623 aa9.33□□□□□ -0.92
SPC25-203ENST00000472216 CALML4Q96GE6 196 aa9.33□□□□□ -0.92
SPC25-203ENST00000472216 CBWD1Q9BRT8 395 aa9.33□□□□□ -0.92
SPC25-203ENST00000472216 TEX101Q9BY14 249 aa9.33□□□□□ -0.92
SPC25-203ENST00000472216 UBTD1Q9HAC8 227 aa9.33□□□□□ -0.92
SPC25-203ENST00000472216 SAMSN1Q9NSI8 373 aaKnown RBP9.33□□□□□ -0.92
SPC25-203ENST00000472216 IFT80Q9P2H3 777 aaPredicted RBP9.33□□□□□ -0.92
SPC25-203ENST00000472216 SLC12A6Q9UHW9 1150 aa9.33□□□□□ -0.92
SPC25-203ENST00000472216 GNPTGQ9UJJ9 305 aa9.33□□□□□ -0.92
SPC25-203ENST00000472216 FCF1Q9Y324 198 aaKnown RBP9.33□□□□□ -0.92
SPC25-203ENST00000472216 PHF3Q92576 2039 aaKnown RBP9.32□□□□□ -0.92
SPC25-203ENST00000472216 A0A0G2JNJ9 132 aa9.32□□□□□ -0.92
SPC25-203ENST00000472216 CFAP69A5D8W1 941 aa9.32□□□□□ -0.92
SPC25-203ENST00000472216 ASS1P00966 412 aaKnown RBP9.32□□□□□ -0.92
SPC25-203ENST00000472216 RHOCP08134 193 aa9.32□□□□□ -0.92
SPC25-203ENST00000472216 F3P13726 295 aa9.32□□□□□ -0.92
SPC25-203ENST00000472216 EEF1DP29692 281 aaKnown RBP9.32□□□□□ -0.92
SPC25-203ENST00000472216 FOXL2P58012 376 aa9.32□□□□□ -0.92
SPC25-203ENST00000472216 OCRLQ01968 901 aa9.32□□□□□ -0.92
SPC25-203ENST00000472216 QPCTQ16769 361 aa9.32□□□□□ -0.92
SPC25-203ENST00000472216 GOLGA7BQ2TAP0 167 aa9.32□□□□□ -0.92
SPC25-203ENST00000472216 FAM120AOSQ5T036 256 aa9.32□□□□□ -0.92
SPC25-203ENST00000472216 GARNL3Q5VVW2 1013 aa9.32□□□□□ -0.92
SPC25-203ENST00000472216 ZNF385CQ66K41 422 aaPredicted RBP9.32□□□□□ -0.92
SPC25-203ENST00000472216 HIBCHQ6NVY1 386 aaPredicted RBP9.32□□□□□ -0.92
SPC25-203ENST00000472216 FBXL22Q6P050 247 aa9.32□□□□□ -0.92
SPC25-203ENST00000472216 ZNF720Q7Z2F6 126 aa9.32□□□□□ -0.92
SPC25-203ENST00000472216 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.32□□□□□ -0.92
SPC25-203ENST00000472216 SIX6OS1Q8N1H7 587 aa9.32□□□□□ -0.92
SPC25-203ENST00000472216 BRIX1Q8TDN6 353 aaKnown RBP9.32□□□□□ -0.92
SPC25-203ENST00000472216 ISG20Q96AZ6 181 aaKnown RBP9.32□□□□□ -0.92
SPC25-203ENST00000472216 FAM149B1Q96BN6 582 aa9.32□□□□□ -0.92
SPC25-203ENST00000472216 CELF6Q96J87 481 aaKnown RBP9.32□□□□□ -0.92
SPC25-203ENST00000472216 FRMD6Q96NE9 622 aa9.32□□□□□ -0.92
SPC25-203ENST00000472216 TWNKQ96RR1 684 aa9.32□□□□□ -0.92
SPC25-203ENST00000472216 OLFM1Q99784 485 aa9.32□□□□□ -0.92
SPC25-203ENST00000472216 PRMT1Q99873 361 aaKnown RBP9.32□□□□□ -0.92
SPC25-203ENST00000472216 RASSF4Q9H2L5 321 aa9.32□□□□□ -0.92
SPC25-203ENST00000472216 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.32□□□□□ -0.92
SPC25-203ENST00000472216 ZNF701Q9NV72 531 aaPredicted RBP9.32□□□□□ -0.92
SPC25-203ENST00000472216 MED29Q9NX70 200 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms