RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM2-209	ENST00000470083	EEF2K	O00418	725 aa	Known RBP	11.74	□□□□□ -0.53
LSM2-209	ENST00000470083	PRICKLE3	O43900	615 aa	Predicted RBP	11.74	□□□□□ -0.53
LSM2-209	ENST00000470083	FZD6	O60353	706 aa		11.74	□□□□□ -0.53
LSM2-209	ENST00000470083	PEX11B	O96011	259 aa		11.74	□□□□□ -0.53
LSM2-209	ENST00000470083	TRBC1	P01850	177 aa		11.74	□□□□□ -0.53
LSM2-209	ENST00000470083	IGHE	P01854	428 aa		11.74	□□□□□ -0.53
LSM2-209	ENST00000470083	PDHA1	P08559	390 aa		11.74	□□□□□ -0.53
LSM2-209	ENST00000470083	GPR89B	P0CG08	455 aa		11.74	□□□□□ -0.53
LSM2-209	ENST00000470083	ZNF8	P17098	575 aa	Predicted RBP	11.74	□□□□□ -0.53
LSM2-209	ENST00000470083	PTP4A2	Q12974	167 aa		11.74	□□□□□ -0.53
LSM2-209	ENST00000470083	GPR19	Q15760	415 aa		11.74	□□□□□ -0.53
LSM2-209	ENST00000470083	SEPT7	Q16181	437 aa	Known RBP	11.74	□□□□□ -0.53
LSM2-209	ENST00000470083	KLHL35	Q6PF15	583 aa		11.74	□□□□□ -0.53
LSM2-209	ENST00000470083	WASH2P	Q6VEQ5	465 aa		11.74	□□□□□ -0.53
LSM2-209	ENST00000470083	SPOCD1	Q6ZMY3	1216 aa		11.74	□□□□□ -0.53
LSM2-209	ENST00000470083	RFX8	Q6ZV50	586 aa		11.74	□□□□□ -0.53
LSM2-209	ENST00000470083	ZNF677	Q86XU0	584 aa		11.74	□□□□□ -0.53
LSM2-209	ENST00000470083	SYTL1	Q8IYJ3	562 aa		11.74	□□□□□ -0.53
LSM2-209	ENST00000470083	ZNF808	Q8N4W9	903 aa	Predicted RBP	11.74	□□□□□ -0.53
LSM2-209	ENST00000470083	C3orf20	Q8ND61	904 aa		11.74	□□□□□ -0.53
LSM2-209	ENST00000470083	PPP4R1	Q8TF05	950 aa		11.74	□□□□□ -0.53
LSM2-209	ENST00000470083	COG1	Q8WTW3	980 aa		11.74	□□□□□ -0.53
LSM2-209	ENST00000470083	CXorf40B	Q96DE9	158 aa		11.74	□□□□□ -0.53
LSM2-209	ENST00000470083	TIGD1	Q96MW7	591 aa		11.74	□□□□□ -0.53
LSM2-209	ENST00000470083	WDR24	Q96S15	920 aa		11.74	□□□□□ -0.53
LSM2-209	ENST00000470083	EIF3C	Q99613	913 aa	Known RBP	11.74	□□□□□ -0.53
LSM2-209	ENST00000470083	ZBTB20	Q9HC78	741 aa	Predicted RBP	11.74	□□□□□ -0.53
LSM2-209	ENST00000470083	GDPD2	Q9HCC8	539 aa		11.74	□□□□□ -0.53
LSM2-209	ENST00000470083	GPATCH2L	Q9NWQ4	482 aa		11.74	□□□□□ -0.53
LSM2-209	ENST00000470083	SLC23A2	Q9UGH3	650 aa		11.74	□□□□□ -0.53
LSM2-209	ENST00000470083	NOCT	Q9UK39	431 aa	Known RBP	11.74	□□□□□ -0.53
LSM2-209	ENST00000470083	PADI2	Q9Y2J8	665 aa		11.74	□□□□□ -0.53
LSM2-209	ENST00000470083	CSAG2	Q9Y5P2	127 aa		11.74	□□□□□ -0.53
LSM2-209	ENST00000470083	SIGLEC16	A6NMB1	481 aa		11.73	□□□□□ -0.53
LSM2-209	ENST00000470083	CD1E	P15812	388 aa		11.73	□□□□□ -0.53
LSM2-209	ENST00000470083	ERCC2	P18074	760 aa		11.73	□□□□□ -0.53
LSM2-209	ENST00000470083	OTX2	P32243	289 aa		11.73	□□□□□ -0.53
LSM2-209	ENST00000470083	HADHA	P40939	763 aa		11.73	□□□□□ -0.53
LSM2-209	ENST00000470083	SOX8	P57073	446 aa		11.73	□□□□□ -0.53
LSM2-209	ENST00000470083	KRTAP10-9	P60411	292 aa		11.73	□□□□□ -0.53
LSM2-209	ENST00000470083	MAX	P61244	160 aa		11.73	□□□□□ -0.53
LSM2-209	ENST00000470083	FMO1	Q01740	532 aa		11.73	□□□□□ -0.53
LSM2-209	ENST00000470083	INSC	Q1MX18	579 aa		11.73	□□□□□ -0.53
LSM2-209	ENST00000470083	TDRD12	Q587J7	1177 aa	Known RBP	11.73	□□□□□ -0.53
LSM2-209	ENST00000470083	DNTTIP2	Q5QJE6	756 aa	Known RBP	11.73	□□□□□ -0.53
LSM2-209	ENST00000470083	PRAMEF17	Q5VTA0	474 aa		11.73	□□□□□ -0.53
LSM2-209	ENST00000470083	AGAP9	Q5VTM2	703 aa		11.73	□□□□□ -0.53
LSM2-209	ENST00000470083	CRTC3	Q6UUV7	619 aa		11.73	□□□□□ -0.53
LSM2-209	ENST00000470083	BBS5	Q8N3I7	341 aa		11.73	□□□□□ -0.53
LSM2-209	ENST00000470083	SLC20A1	Q8WUM9	679 aa		11.73	□□□□□ -0.53
LSM2-209	ENST00000470083	CLIP3	Q96DZ5	547 aa		11.73	□□□□□ -0.53
LSM2-209	ENST00000470083	CNPY3	Q9BT09	278 aa		11.73	□□□□□ -0.53
LSM2-209	ENST00000470083	DHRS4	Q9BTZ2	278 aa		11.73	□□□□□ -0.53
LSM2-209	ENST00000470083	NAA15	Q9BXJ9	866 aa	Known RBP	11.73	□□□□□ -0.53
LSM2-209	ENST00000470083	OR2AG1	Q9H205	316 aa		11.73	□□□□□ -0.53
LSM2-209	ENST00000470083	PCMTD2	Q9NV79	361 aa		11.73	□□□□□ -0.53
LSM2-209	ENST00000470083	SUCO	Q9UBS9	1254 aa	Known RBP	11.73	□□□□□ -0.53
LSM2-209	ENST00000470083	AP4E1	Q9UPM8	1137 aa		11.73	□□□□□ -0.53
LSM2-209	ENST00000470083	DNAJC16	Q9Y2G8	782 aa		11.73	□□□□□ -0.53
LSM2-209	ENST00000470083	ZDHHC9	Q9Y397	364 aa		11.73	□□□□□ -0.53
LSM2-209	ENST00000470083	UBA6	A0AVT1	1052 aa	Predicted RBP	11.72	□□□□□ -0.53
LSM2-209	ENST00000470083		C9J4A7	227 aa		11.72	□□□□□ -0.53
LSM2-209	ENST00000470083		F8VZ95	297 aa		11.72	□□□□□ -0.53
LSM2-209	ENST00000470083	CHUK	O15111	745 aa		11.72	□□□□□ -0.53
LSM2-209	ENST00000470083	KCNN4	O15554	427 aa		11.72	□□□□□ -0.53
LSM2-209	ENST00000470083	DAPK3	O43293	454 aa		11.72	□□□□□ -0.53
LSM2-209	ENST00000470083	ZBTB11	O95625	1053 aa	Predicted RBP	11.72	□□□□□ -0.53
LSM2-209	ENST00000470083	ZNF7	P17097	686 aa	Predicted RBP	11.72	□□□□□ -0.53
LSM2-209	ENST00000470083	FECH	P22830	423 aa		11.72	□□□□□ -0.53
LSM2-209	ENST00000470083	RPL10	P27635	214 aa	Known RBP	11.72	□□□□□ -0.53
LSM2-209	ENST00000470083	SPINT3	P49223	89 aa		11.72	□□□□□ -0.53
LSM2-209	ENST00000470083	EPHB1	P54762	984 aa		11.72	□□□□□ -0.53
LSM2-209	ENST00000470083	OTUD4	Q01804	1114 aa	Known RBP	11.72	□□□□□ -0.53
LSM2-209	ENST00000470083	CDR2	Q01850	454 aa		11.72	□□□□□ -0.53
LSM2-209	ENST00000470083	ABR	Q12979	859 aa		11.72	□□□□□ -0.53
LSM2-209	ENST00000470083	PLA2G4E	Q3MJ16	856 aa		11.72	□□□□□ -0.53
LSM2-209	ENST00000470083	TMTC4	Q5T4D3	741 aa		11.72	□□□□□ -0.53
LSM2-209	ENST00000470083	KLHDC7A	Q5VTJ3	777 aa		11.72	□□□□□ -0.53
LSM2-209	ENST00000470083	B3GNTL1	Q67FW5	361 aa	Predicted RBP	11.72	□□□□□ -0.53
LSM2-209	ENST00000470083	FCRL6	Q6DN72	434 aa		11.72	□□□□□ -0.53
LSM2-209	ENST00000470083	RPTN	Q6XPR3	784 aa		11.72	□□□□□ -0.53
LSM2-209	ENST00000470083	MRGPRG	Q86SM5	289 aa		11.72	□□□□□ -0.53
LSM2-209	ENST00000470083	ELOA2	Q8IYF1	753 aa	Predicted RBP	11.72	□□□□□ -0.53
LSM2-209	ENST00000470083	TIMM29	Q9BSF4	260 aa		11.72	□□□□□ -0.53
LSM2-209	ENST00000470083	FAM83D	Q9H4H8	585 aa		11.72	□□□□□ -0.53
LSM2-209	ENST00000470083	DHX35	Q9H5Z1	703 aa	Known RBP	11.72	□□□□□ -0.53
LSM2-209	ENST00000470083	ADAM22	Q9P0K1	906 aa		11.72	□□□□□ -0.53
LSM2-209	ENST00000470083	ATP6V1D	Q9Y5K8	247 aa		11.72	□□□□□ -0.53
LSM2-209	ENST00000470083	ZGRF1	Q86YA3	2104 aa		11.71	□□□□□ -0.53
LSM2-209	ENST00000470083	RGSL1	A5PLK6	1076 aa		11.71	□□□□□ -0.53
LSM2-209	ENST00000470083	ANKRD62	A6NC57	917 aa		11.71	□□□□□ -0.53
LSM2-209	ENST00000470083	PEX12	O00623	359 aa		11.71	□□□□□ -0.53
LSM2-209	ENST00000470083	KMO	O15229	486 aa		11.71	□□□□□ -0.53
LSM2-209	ENST00000470083	VEGFD	O43915	354 aa		11.71	□□□□□ -0.53
LSM2-209	ENST00000470083	KLF7	O75840	302 aa	Predicted RBP	11.71	□□□□□ -0.53
LSM2-209	ENST00000470083	CLDN7	O95471	211 aa		11.71	□□□□□ -0.53
LSM2-209	ENST00000470083	UNG	P13051	313 aa	Predicted RBP	11.71	□□□□□ -0.53
LSM2-209	ENST00000470083	UCHL3	P15374	230 aa		11.71	□□□□□ -0.53
LSM2-209	ENST00000470083	MTIF2	P46199	727 aa	Known RBP	11.71	□□□□□ -0.53
LSM2-209	ENST00000470083	NSF	P46459	744 aa	Known RBP	11.71	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms