RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 CMKLR1Q99788 373 aa11.36□□□□□ -0.59
CDHR3-205ENST00000468143 TIMM29Q9BSF4 260 aa11.36□□□□□ -0.59
CDHR3-205ENST00000468143 TBC1D10AQ9BXI6 508 aa11.36□□□□□ -0.59
CDHR3-205ENST00000468143 TLR10Q9BXR5 811 aa11.36□□□□□ -0.59
CDHR3-205ENST00000468143 STN1Q9H668 368 aaKnown RBP11.36□□□□□ -0.59
CDHR3-205ENST00000468143 LRRC40Q9H9A6 602 aa11.36□□□□□ -0.59
CDHR3-205ENST00000468143 ETNK1Q9HBU6 452 aa11.36□□□□□ -0.59
CDHR3-205ENST00000468143 ZNF624Q9P2J8 865 aaPredicted RBP11.36□□□□□ -0.59
CDHR3-205ENST00000468143 FAM8A1Q9UBU6 413 aa11.36□□□□□ -0.59
CDHR3-205ENST00000468143 PSMD13Q9UNM6 376 aa11.36□□□□□ -0.59
CDHR3-205ENST00000468143 WDR37Q9Y2I8 494 aa11.36□□□□□ -0.59
CDHR3-205ENST00000468143 GOLGA6L3A6NEY3 463 aa11.35□□□□□ -0.59
CDHR3-205ENST00000468143 OR5K4A6NMS3 321 aa11.35□□□□□ -0.59
CDHR3-205ENST00000468143 OR52A4PA6NMU1 304 aa11.35□□□□□ -0.59
CDHR3-205ENST00000468143 PSMD3O43242 534 aa11.35□□□□□ -0.59
CDHR3-205ENST00000468143 NRDCO43847 1150 aa11.35□□□□□ -0.59
CDHR3-205ENST00000468143 CEP104O60308 925 aa11.35□□□□□ -0.59
CDHR3-205ENST00000468143 AP2A1O95782 977 aa11.35□□□□□ -0.59
CDHR3-205ENST00000468143 VIPP01282 170 aa11.35□□□□□ -0.59
CDHR3-205ENST00000468143 FGGP02679 453 aa11.35□□□□□ -0.59
CDHR3-205ENST00000468143 ITGA2BP08514 1039 aa11.35□□□□□ -0.59
CDHR3-205ENST00000468143 XRCC1P18887 633 aaPredicted RBP11.35□□□□□ -0.59
CDHR3-205ENST00000468143 MC4RP32245 332 aa11.35□□□□□ -0.59
CDHR3-205ENST00000468143 GRIA1P42261 906 aa11.35□□□□□ -0.59
CDHR3-205ENST00000468143 LMAN1P49257 510 aa11.35□□□□□ -0.59
CDHR3-205ENST00000468143 ZNF140P52738 457 aaPredicted RBP11.35□□□□□ -0.59
CDHR3-205ENST00000468143 LIMK2P53671 638 aa11.35□□□□□ -0.59
CDHR3-205ENST00000468143 UBE2IP63279 158 aaKnown RBP11.35□□□□□ -0.59
CDHR3-205ENST00000468143 EIF3IQ13347 325 aaKnown RBP11.35□□□□□ -0.59
CDHR3-205ENST00000468143 NFE2L1Q14494 772 aa11.35□□□□□ -0.59
CDHR3-205ENST00000468143 CLCA4Q14CN2 919 aa11.35□□□□□ -0.59
CDHR3-205ENST00000468143 SIX1Q15475 284 aaPredicted RBP11.35□□□□□ -0.59
CDHR3-205ENST00000468143 CCDC38Q502W7 563 aa11.35□□□□□ -0.59
CDHR3-205ENST00000468143 TMEM71Q6P5X7 295 aa11.35□□□□□ -0.59
CDHR3-205ENST00000468143 IGF2-ASQ6U949 168 aa11.35□□□□□ -0.59
CDHR3-205ENST00000468143 ABRAXAS1Q6UWZ7 409 aa11.35□□□□□ -0.59
CDHR3-205ENST00000468143 FAM83HQ6ZRV2 1179 aaPredicted RBP11.35□□□□□ -0.59
CDHR3-205ENST00000468143 AMZ2Q86W34 360 aa11.35□□□□□ -0.59
CDHR3-205ENST00000468143 TRIM48Q8IWZ4 208 aa11.35□□□□□ -0.59
CDHR3-205ENST00000468143 TRIM58Q8NG06 486 aa11.35□□□□□ -0.59
CDHR3-205ENST00000468143 OR4D9Q8NGE8 314 aa11.35□□□□□ -0.59
CDHR3-205ENST00000468143 SH3KBP1Q96B97 665 aa11.35□□□□□ -0.59
CDHR3-205ENST00000468143 RTP4Q96DX8 246 aa11.35□□□□□ -0.59
CDHR3-205ENST00000468143 FRMD8P1Q9BZ68 369 aaPredicted RBP11.35□□□□□ -0.59
CDHR3-205ENST00000468143 ZCCHC2Q9C0B9 1178 aaKnown RBP11.35□□□□□ -0.59
CDHR3-205ENST00000468143 KLHL3Q9UH77 587 aa11.35□□□□□ -0.59
CDHR3-205ENST00000468143 CRLS1Q9UJA2 301 aa11.35□□□□□ -0.59
CDHR3-205ENST00000468143 RP1P56715 2156 aa11.35□□□□□ -0.59
CDHR3-205ENST00000468143 PRR19A6NJB7 356 aa11.34□□□□□ -0.59
CDHR3-205ENST00000468143 E7EVH7 732 aa11.34□□□□□ -0.59
CDHR3-205ENST00000468143 DUX1O43812 170 aa11.34□□□□□ -0.59
CDHR3-205ENST00000468143 PRAMEF10O60809 474 aa11.34□□□□□ -0.59
CDHR3-205ENST00000468143 TYRP1P17643 537 aa11.34□□□□□ -0.59
CDHR3-205ENST00000468143 VCLP18206 1134 aa11.34□□□□□ -0.59
CDHR3-205ENST00000468143 RPL22P35268 128 aaKnown RBP11.34□□□□□ -0.59
CDHR3-205ENST00000468143 HADHAP40939 763 aa11.34□□□□□ -0.59
CDHR3-205ENST00000468143 KCNJ1P48048 391 aa11.34□□□□□ -0.59
CDHR3-205ENST00000468143 GPLD1P80108 840 aa11.34□□□□□ -0.59
CDHR3-205ENST00000468143 PDE1BQ01064 536 aa11.34□□□□□ -0.59
CDHR3-205ENST00000468143 TLE3Q04726 772 aa11.34□□□□□ -0.59
CDHR3-205ENST00000468143 SQSTM1Q13501 440 aa11.34□□□□□ -0.59
CDHR3-205ENST00000468143 TGIF1Q15583 401 aa11.34□□□□□ -0.59
CDHR3-205ENST00000468143 CCNG2Q16589 344 aa11.34□□□□□ -0.59
CDHR3-205ENST00000468143 CLPPQ16740 277 aaPredicted RBP11.34□□□□□ -0.59
CDHR3-205ENST00000468143 LONRF2Q1L5Z9 754 aa11.34□□□□□ -0.59
CDHR3-205ENST00000468143 ZRANB3Q5FWF4 1079 aa11.34□□□□□ -0.59
CDHR3-205ENST00000468143 PPP1R21Q6ZMI0 780 aa11.34□□□□□ -0.59
CDHR3-205ENST00000468143 TAS2R42Q7RTR8 314 aa11.34□□□□□ -0.59
CDHR3-205ENST00000468143 CLEC14AQ86T13 490 aa11.34□□□□□ -0.59
CDHR3-205ENST00000468143 CCDC89Q8N998 374 aa11.34□□□□□ -0.59
CDHR3-205ENST00000468143 DNAAF3Q8N9W5 541 aa11.34□□□□□ -0.59
CDHR3-205ENST00000468143 UBE2Q2Q8WVN8 375 aa11.34□□□□□ -0.59
CDHR3-205ENST00000468143 JPH3Q8WXH2 748 aaPredicted RBP11.34□□□□□ -0.59
CDHR3-205ENST00000468143 CXorf40BQ96DE9 158 aa11.34□□□□□ -0.59
CDHR3-205ENST00000468143 DCUN1D1Q96GG9 259 aa11.34□□□□□ -0.59
CDHR3-205ENST00000468143 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.34□□□□□ -0.59
CDHR3-205ENST00000468143 RAB6BQ9NRW1 208 aa11.34□□□□□ -0.59
CDHR3-205ENST00000468143 SMOXQ9NWM0 555 aa11.34□□□□□ -0.59
CDHR3-205ENST00000468143 OCIAD1Q9NX40 245 aa11.34□□□□□ -0.59
CDHR3-205ENST00000468143 FOXJ2Q9P0K8 574 aa11.34□□□□□ -0.59
CDHR3-205ENST00000468143 AKAP7Q9P0M2 348 aaPredicted RBP11.34□□□□□ -0.59
CDHR3-205ENST00000468143 FEZ2Q9UHY8 353 aaPredicted RBP11.34□□□□□ -0.59
CDHR3-205ENST00000468143 SLC30A1Q9Y6M5 507 aa11.34□□□□□ -0.59
CDHR3-205ENST00000468143 C9orf172C9J069 976 aa11.33□□□□□ -0.6
CDHR3-205ENST00000468143 POLBP06746 335 aa11.33□□□□□ -0.6
CDHR3-205ENST00000468143 THRAP10827 490 aa11.33□□□□□ -0.6
CDHR3-205ENST00000468143 FGF3P11487 239 aaPredicted RBP11.33□□□□□ -0.6
CDHR3-205ENST00000468143 AMD1P17707 334 aa11.33□□□□□ -0.6
CDHR3-205ENST00000468143 ITGALP20701 1170 aa11.33□□□□□ -0.6
CDHR3-205ENST00000468143 FDFT1P37268 417 aa11.33□□□□□ -0.6
CDHR3-205ENST00000468143 TERF1P54274 439 aa11.33□□□□□ -0.6
CDHR3-205ENST00000468143 CXADRP78310 365 aa11.33□□□□□ -0.6
CDHR3-205ENST00000468143 TMEM26Q6ZUK4 368 aa11.33□□□□□ -0.6
CDHR3-205ENST00000468143 GSTA5Q7RTV2 222 aa11.33□□□□□ -0.6
CDHR3-205ENST00000468143 SNX20Q7Z614 316 aa11.33□□□□□ -0.6
CDHR3-205ENST00000468143 LINC00523Q86TU6 105 aa11.33□□□□□ -0.6
CDHR3-205ENST00000468143 ZFAND4Q86XD8 727 aa11.33□□□□□ -0.6
CDHR3-205ENST00000468143 NXPE1Q8N323 547 aa11.33□□□□□ -0.6
CDHR3-205ENST00000468143 LILRA3Q8N6C8 439 aaPredicted RBP11.33□□□□□ -0.6
CDHR3-205ENST00000468143 PMEPA1Q969W9 287 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms