RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 FSHRP23945 695 aa18.05■□□□□ 0.48
COL9A3-205ENST00000466192 HK3P52790 923 aa18.05■□□□□ 0.48
COL9A3-205ENST00000466192 ACTR3P61158 418 aa18.05■□□□□ 0.48
COL9A3-205ENST00000466192 POLR2LP62875 67 aaKnown RBP18.05■□□□□ 0.48
COL9A3-205ENST00000466192 TBL3Q12788 808 aaKnown RBP18.05■□□□□ 0.48
COL9A3-205ENST00000466192 RARS2Q5T160 578 aaKnown RBP18.05■□□□□ 0.48
COL9A3-205ENST00000466192 LYPLAL1Q5VWZ2 237 aa18.05■□□□□ 0.48
COL9A3-205ENST00000466192 BRAT1Q6PJG6 821 aa18.05■□□□□ 0.48
COL9A3-205ENST00000466192 ETFBKMTQ8IXQ9 262 aa18.05■□□□□ 0.48
COL9A3-205ENST00000466192 PELI3Q8N2H9 469 aa18.05■□□□□ 0.48
COL9A3-205ENST00000466192 ZNF366Q8N895 744 aa18.05■□□□□ 0.48
COL9A3-205ENST00000466192 SMARCD2Q92925 531 aa18.05■□□□□ 0.48
COL9A3-205ENST00000466192 CCDC124Q96CT7 223 aaKnown RBP18.05■□□□□ 0.48
COL9A3-205ENST00000466192 SZT2Q5T011 3432 aa18.05■□□□□ 0.48
COL9A3-205ENST00000466192 ATP6AP2A0A1C7CYW4 349 aa18.04■□□□□ 0.48
COL9A3-205ENST00000466192 SLC22A2O15244 555 aa18.04■□□□□ 0.48
COL9A3-205ENST00000466192 KLK8O60259 260 aa18.04■□□□□ 0.48
COL9A3-205ENST00000466192 TBX10O75333 385 aa18.04■□□□□ 0.48
COL9A3-205ENST00000466192 ATP6AP2O75787 350 aa18.04■□□□□ 0.48
COL9A3-205ENST00000466192 EEF1DP29692 281 aaKnown RBP18.04■□□□□ 0.48
COL9A3-205ENST00000466192 ADSLP30566 484 aaPredicted RBP18.04■□□□□ 0.48
COL9A3-205ENST00000466192 ATP13A5Q4VNC0 1218 aa18.04■□□□□ 0.48
COL9A3-205ENST00000466192 TRPC4APQ8TEL6 797 aa18.04■□□□□ 0.48
COL9A3-205ENST00000466192 PDLIM5Q96HC4 596 aaKnown RBP18.04■□□□□ 0.48
COL9A3-205ENST00000466192 SLC27A6Q9Y2P4 619 aa18.04■□□□□ 0.48
COL9A3-205ENST00000466192 PLXNA2O75051 1894 aa18.04■□□□□ 0.48
COL9A3-205ENST00000466192 XIRP2A4UGR9 3374 aa18.04■□□□□ 0.48
COL9A3-205ENST00000466192 SRPRAP08240 638 aaKnown RBP18.04■□□□□ 0.48
COL9A3-205ENST00000466192 RPSAP08865 295 aaKnown RBP18.04■□□□□ 0.48
COL9A3-205ENST00000466192 SLC6A11P48066 632 aa18.04■□□□□ 0.48
COL9A3-205ENST00000466192 SPINT3P49223 89 aa18.04■□□□□ 0.48
COL9A3-205ENST00000466192 GAB4Q2WGN9 574 aa18.04■□□□□ 0.48
COL9A3-205ENST00000466192 GET4Q7L5D6 327 aaPredicted RBP18.04■□□□□ 0.48
COL9A3-205ENST00000466192 IGFLR1Q9H665 355 aa18.04■□□□□ 0.48
COL9A3-205ENST00000466192 TSR3Q9UJK0 312 aaKnown RBP18.04■□□□□ 0.48
COL9A3-205ENST00000466192 KIAA1549LQ6ZVL6 1849 aa18.04■□□□□ 0.48
COL9A3-205ENST00000466192 SLC25A14O95258 325 aaPredicted RBP18.03■□□□□ 0.48
COL9A3-205ENST00000466192 TRIM16O95361 564 aa18.03■□□□□ 0.48
COL9A3-205ENST00000466192 AGTR2P50052 363 aa18.03■□□□□ 0.48
COL9A3-205ENST00000466192 VASPP50552 380 aaPredicted RBP18.03■□□□□ 0.48
COL9A3-205ENST00000466192 CCNG1P51959 295 aa18.03■□□□□ 0.48
COL9A3-205ENST00000466192 INHBCP55103 352 aa18.03■□□□□ 0.48
COL9A3-205ENST00000466192 ZRSR2Q15696 482 aaKnown RBP18.03■□□□□ 0.48
COL9A3-205ENST00000466192 PPP2R2DQ66LE6 453 aa18.03■□□□□ 0.48
COL9A3-205ENST00000466192 CYHR1Q6ZMK1 362 aa18.03■□□□□ 0.48
COL9A3-205ENST00000466192 MACC1Q6ZN28 852 aa18.03■□□□□ 0.48
COL9A3-205ENST00000466192 GPSM1Q86YR5 675 aa18.03■□□□□ 0.48
COL9A3-205ENST00000466192 HPS6Q86YV9 775 aa18.03■□□□□ 0.48
COL9A3-205ENST00000466192 CLYBLQ8N0X4 340 aa18.03■□□□□ 0.48
COL9A3-205ENST00000466192 WFIKKN2Q8TEU8 576 aa18.03■□□□□ 0.48
COL9A3-205ENST00000466192 NXPE3Q969Y0 559 aa18.03■□□□□ 0.48
COL9A3-205ENST00000466192 RCN3Q96D15 328 aa18.03■□□□□ 0.48
COL9A3-205ENST00000466192 PLEKHG4BQ96PX9 1271 aa18.03■□□□□ 0.48
COL9A3-205ENST00000466192 LMAN2LQ9H0V9 348 aa18.03■□□□□ 0.48
COL9A3-205ENST00000466192 ABCG8Q9H221 673 aa18.03■□□□□ 0.48
COL9A3-205ENST00000466192 STOML1Q9UBI4 398 aa18.03■□□□□ 0.48
COL9A3-205ENST00000466192 IL36AQ9UHA7 158 aa18.03■□□□□ 0.48
COL9A3-205ENST00000466192 CD84Q9UIB8 345 aa18.03■□□□□ 0.48
COL9A3-205ENST00000466192 SLC8A2Q9UPR5 921 aa18.03■□□□□ 0.48
COL9A3-205ENST00000466192 COL4A3Q01955 1670 aa18.03■□□□□ 0.48
COL9A3-205ENST00000466192 MUC22E2RYF6 1773 aaPredicted RBP18.03■□□□□ 0.48
COL9A3-205ENST00000466192 HEPACAM2A8MVW5 462 aa18.03■□□□□ 0.48
COL9A3-205ENST00000466192 PRRT4C9JH25 899 aa18.03■□□□□ 0.48
COL9A3-205ENST00000466192 CCNT2O60583 730 aaKnown RBP18.03■□□□□ 0.48
COL9A3-205ENST00000466192 ASLP04424 464 aa18.03■□□□□ 0.48
COL9A3-205ENST00000466192 RPS17P08708 135 aaKnown RBP18.03■□□□□ 0.48
COL9A3-205ENST00000466192 FOXA1P55317 472 aa18.03■□□□□ 0.48
COL9A3-205ENST00000466192 CLCQ05315 142 aa18.03■□□□□ 0.48
COL9A3-205ENST00000466192 UGT3A2Q3SY77 523 aa18.03■□□□□ 0.48
COL9A3-205ENST00000466192 TCHHL1Q5QJ38 904 aaPredicted RBP18.03■□□□□ 0.48
COL9A3-205ENST00000466192 PGM2L1Q6PCE3 622 aa18.03■□□□□ 0.48
COL9A3-205ENST00000466192 CHSY3Q70JA7 882 aa18.03■□□□□ 0.48
COL9A3-205ENST00000466192 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.03■□□□□ 0.48
COL9A3-205ENST00000466192 KYQ8NBH2 561 aa18.03■□□□□ 0.48
COL9A3-205ENST00000466192 C19orf60Q96EN9 201 aa18.03■□□□□ 0.48
COL9A3-205ENST00000466192 C3orf30Q96M34 536 aa18.03■□□□□ 0.48
COL9A3-205ENST00000466192 ASB2Q96Q27 587 aa18.03■□□□□ 0.48
COL9A3-205ENST00000466192 SEMA4BQ9NPR2 832 aaPredicted RBP18.03■□□□□ 0.48
COL9A3-205ENST00000466192 ELOVL2Q9NXB9 296 aa18.03■□□□□ 0.48
COL9A3-205ENST00000466192 STX18Q9P2W9 335 aaKnown RBP18.03■□□□□ 0.48
COL9A3-205ENST00000466192 DNAJC15Q9Y5T4 150 aa18.03■□□□□ 0.48
COL9A3-205ENST00000466192 TSPAN11A1L157 253 aa18.02■□□□□ 0.48
COL9A3-205ENST00000466192 STX16-NPEPL1H3BU86 382 aa18.02■□□□□ 0.48
COL9A3-205ENST00000466192 RFXAPO00287 272 aa18.02■□□□□ 0.48
COL9A3-205ENST00000466192 STX16O14662 325 aa18.02■□□□□ 0.48
COL9A3-205ENST00000466192 UBDO15205 165 aa18.02■□□□□ 0.48
COL9A3-205ENST00000466192 GPC4O75487 556 aa18.02■□□□□ 0.48
COL9A3-205ENST00000466192 NFATC1O95644 943 aa18.02■□□□□ 0.48
COL9A3-205ENST00000466192 TIMP2P16035 220 aa18.02■□□□□ 0.48
COL9A3-205ENST00000466192 B4GALNT1Q00973 533 aa18.02■□□□□ 0.48
COL9A3-205ENST00000466192 ARHGEF7Q14155 803 aa18.02■□□□□ 0.48
COL9A3-205ENST00000466192 DSELQ8IZU8 1212 aa18.02■□□□□ 0.48
COL9A3-205ENST00000466192 KIRREL3Q8IZU9 778 aa18.02■□□□□ 0.48
COL9A3-205ENST00000466192 KCNA7Q96RP8 456 aa18.02■□□□□ 0.48
COL9A3-205ENST00000466192 FAM83CQ9BQN1 747 aa18.02■□□□□ 0.48
COL9A3-205ENST00000466192 PCDH12Q9NPG4 1184 aa18.02■□□□□ 0.48
COL9A3-205ENST00000466192 ZDHHC3Q9NYG2 299 aa18.02■□□□□ 0.48
COL9A3-205ENST00000466192 UTP6Q9NYH9 597 aaKnown RBP18.02■□□□□ 0.48
COL9A3-205ENST00000466192 PACSIN3Q9UKS6 424 aa18.02■□□□□ 0.48
COL9A3-205ENST00000466192 TMPRSS11EQ9UL52 423 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms